RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 COL4A5P29400 1685 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 IGHV3-21A0A0B4J1V1 117 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 NDUFA3O95167 84 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 SUPT4H1P63272 117 aaKnown RBP4.75□□□□□ -1.65
VCAN-201ENST00000265077 ATXN8Q156A1 80 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 FAM159AQ6UWV7 190 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 C1QL2Q7Z5L3 287 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 RNF115Q9Y4L5 304 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 A0A1W2PRD5 423 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 A0A1W2PRF3 423 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 A0A1W2PRM7 423 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 PCOLCEQ15113 449 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 C2orf82Q6UX34 121 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 LOXL3P58215 753 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 ATP5G2Q06055 141 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 ABHD12Q8N2K0 398 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 OTORQ9NRC9 128 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 TRBV20OR9-2A0A075B6H5 130 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 H3BMG7 143 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 FASNP49327 2511 aaKnown RBP4.74□□□□□ -1.65
VCAN-201ENST00000265077 LEPP41159 167 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 RPRMLQ8N4K4 120 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 IQCF6A8MYZ5 107 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 NDUFB8O95169 186 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 AMN1Q8IY45 258 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 YPEL1O60688 119 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 YPEL2Q96QA6 119 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 RPL15P61313 204 aaKnown RBP4.74□□□□□ -1.65
VCAN-201ENST00000265077 ID3Q02535 119 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 Q6ZUT4 128 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 CPAMD8Q8IZJ3 1885 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 C12orf77C9JDV5 145 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 CCL21O00585 134 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 UCNP55089 124 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 ZNF497Q6ZNH5 498 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 PYGO2Q9BRQ0 406 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 IGKV3-7A0A075B6H7 116 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 LOC102723996A0A087X1L8 192 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 M0QXV9 152 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 GPHA2Q96T91 129 aa4.74□□□□□ -1.65
VCAN-201ENST00000265077 IGHV1-24A0A0C4DH33 117 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 K7ERJ3 54 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 SPINK2P20155 84 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 NPPCP23582 126 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 DEFB124Q8NES8 71 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 SCGB3A1Q96QR1 104 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 KLK15Q9H2R5 256 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 Q9H3A6 140 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 SAA2-SAA4A0A096LPE2 208 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 IGLV3-32A0A0A0MS00 114 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 GGTLC3B5MD39 225 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 MOSP00540 346 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 CGAP01215 116 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 H3BMM0 161 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 CEACAM4O75871 244 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 FOXC1Q12948 553 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 DDB2Q92466 427 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 UBE2WQ96B02 151 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 C15orf61A6NNL5 157 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 PAQR4Q8N4S7 273 aaPredicted RBP4.73□□□□□ -1.65
VCAN-201ENST00000265077 C15orf53Q8NAA6 179 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 VSIRQ9H7M9 311 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 ATP6V0E2Q8NHE4 81 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 CHCHD2Q9Y6H1 151 aaPredicted RBP4.73□□□□□ -1.65
VCAN-201ENST00000265077 Q6ZT83 130 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 ZNF114Q8NC26 417 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 LRP4O75096 1905 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 SPAARA0A1B0GVQ0 90 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 CRYGCP07315 174 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 ATP5J2P56134 94 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 RPL39P5Q59GN2 51 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 TMEM170BQ5T4T1 132 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 TRAV24A0A0B4J272 114 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 B9A039 149 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 GHRHP01286 108 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 IGLV3-19P01714 112 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 VKORC1Q9BQB6 163 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 CFPP27918 469 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 COQ2Q96H96 371 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 ZNF71Q9NQZ8 489 aaPredicted RBP4.73□□□□□ -1.65
VCAN-201ENST00000265077 PLNP26678 52 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
VCAN-201ENST00000265077 TMEM258P61165 79 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 SLC25A48Q6ZT89 311 aaKnown RBP4.72□□□□□ -1.65
VCAN-201ENST00000265077 SH2D6Q7Z4S9 175 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 C9JAW5 83 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 PPIFP30405 207 aaKnown RBP4.72□□□□□ -1.65
VCAN-201ENST00000265077 SPEM2Q0P670 501 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 SLC25A45Q8N413 288 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 ZNF815PA8K554 130 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 SP9P0CG40 484 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 HAPLN4Q86UW8 402 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 WFDC3Q8IUB2 231 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 RNF182Q8N6D2 247 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 TEX45Q8NA69 505 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 MIR17HGQ75NE6 70 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 E9PQ18 207 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 NMSQ5H8A3 153 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 AMTNQ6UX39 209 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 LHFPL1Q86WI0 220 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms