RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 KLK9Q2XQG4 91 aa10.12□□□□□ -0.79
SPTLC1-201ENST00000262554 C5orf56Q8N8D9 126 aa10.12□□□□□ -0.79
SPTLC1-201ENST00000262554 TMEM18Q96B42 140 aa10.12□□□□□ -0.79
SPTLC1-201ENST00000262554 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
SPTLC1-201ENST00000262554 KLK9Q9UKQ9 250 aa10.12□□□□□ -0.79
SPTLC1-201ENST00000262554 IGHV4-30-2A0A087WSY4 118 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 TRAV40A0A0B4J280 105 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 K7EQM0 130 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 MRPS12O15235 138 aaKnown RBP10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 AMY1AP04745 511 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 CTSGP08311 255 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 C15orf32Q32M92 178 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 GOLT1AQ6ZVE7 132 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 GSN-AS1Q9NRJ2 163 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 NAT8BQ9UHF3 227 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 MOB4Q9Y3A3 225 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 IGSF10Q6WRI0 2623 aa10.11□□□□□ -0.79
SPTLC1-201ENST00000262554 FRMD6-AS1P0C7T7 363 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 CRISP2P16562 243 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 RAB4BP61018 213 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 RHOGP84095 191 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 PDE6HQ13956 83 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 SIGLEC15Q6ZMC9 328 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 TMEM136Q6ZRR5 245 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 Q86TA4 180 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 GBGT1Q8N5D6 347 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 TSKUQ8WUA8 353 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 ZNF414Q96IQ9 312 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 C17orf77Q96MU5 243 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 ZNF331Q9NQX6 463 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 ZNF492Q9P255 531 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 ABCA2Q9BZC7 2435 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 TRBV6-1A0A0K0K1D8 114 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 HLA-DQA1P01909 254 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 DSCR9P59020 149 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 DNLZQ5SXM8 178 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 MRPL54Q6P161 138 aaKnown RBP10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 RASL11AQ6T310 242 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 BRD3OSQ6XYD6 125 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 TMEM219Q86XT9 240 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 BCL6BQ8N143 479 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 ZNF502Q8TBZ5 544 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 DAZAP1Q96EP5 407 aaKnown RBP10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 MEGF9Q9H1U4 602 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 RPP21Q9H633 154 aaKnown RBP10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 AAMDCQ9H7C9 122 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
SPTLC1-201ENST00000262554 GRIFINA4D1Z8 144 aa10.09□□□□□ -0.79
SPTLC1-201ENST00000262554 BMPR1BO00238 502 aa10.09□□□□□ -0.79
SPTLC1-201ENST00000262554 P01737 135 aa10.09□□□□□ -0.79
SPTLC1-201ENST00000262554 PRB1P04280 392 aa10.09□□□□□ -0.79
SPTLC1-201ENST00000262554 MSMBP08118 114 aa10.09□□□□□ -0.79
SPTLC1-201ENST00000262554 RPL7P18124 248 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-201ENST00000262554 PRNTQ86SH4 94 aa10.09□□□□□ -0.79
SPTLC1-201ENST00000262554 TMEM75Q8N9X5 138 aa10.09□□□□□ -0.79
SPTLC1-201ENST00000262554 CFAP46Q8IYW2 2715 aa10.09□□□□□ -0.79
SPTLC1-201ENST00000262554 TRAV8-1A0A0A6YYK1 113 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 SH2D7A6NKC9 451 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 LINC01548A6NM66 108 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 G3V318 75 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 IGLV2-11P01706 119 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 GPR183P32249 361 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 PSG9Q00887 426 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 CT83Q5H943 113 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 TMEM256Q8N2U0 113 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 NUP35Q8NFH5 326 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 WIPF2Q8TF74 440 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 PRSS22Q9GZN4 317 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 C19orf71A6NCJ1 209 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 A8MWL6 223 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 PIFOQ8TCI5 191 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 EEF1AKMT3Q96AZ1 226 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 NEU1Q99519 415 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 ZFP30Q9Y2G7 519 aa10.08□□□□□ -0.8
SPTLC1-201ENST00000262554 ACACBO00763 2458 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 DOPEY1Q5JWR5 2465 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 TRBV7-1A0A0A6YYK4 115 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 A0A1B0GUS0 222 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 HIGD1CA8MV81 97 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 DIRC3C9JPN6 131 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 CLEC3BP05452 202 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 IGHV4-38-2P0DP08 117 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 Q0VG73 95 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 LINC00322Q6ZN03 302 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 OR5R1Q8NH85 324 aa10.07□□□□□ -0.8
SPTLC1-201ENST00000262554 TRAV41A0A0B4J266 112 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 B4DSR2 109 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 APCSP02743 223 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 PAX1P15863 534 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 CSN1S1P47710 185 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 PSG3Q16557 428 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 CDPF1Q6NVV7 123 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 ATP5L2Q7Z4Y8 100 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 BAGE3Q86Y29 109 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 CIARTQ8N365 385 aaPredicted RBP10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 GNB4Q9HAV0 340 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 CACNA1BQ00975 2339 aa10.06□□□□□ -0.8
SPTLC1-201ENST00000262554 ASH1LQ9NR48 2969 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms