RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 TMEM108Q6UXF1 575 aa13.89□□□□□ -0.19
TRAM1-201ENST00000262213 TMSB15BA0A087X1C1 80 aa13.89□□□□□ -0.19
TRAM1-201ENST00000262213 HLA-DRB1P01911 266 aa13.89□□□□□ -0.19
TRAM1-201ENST00000262213 FTH1P19P0C7X4 201 aa13.89□□□□□ -0.19
TRAM1-201ENST00000262213 FXYD7P58549 80 aa13.89□□□□□ -0.19
TRAM1-201ENST00000262213 TMEM116Q8NCL8 245 aa13.89□□□□□ -0.19
TRAM1-201ENST00000262213 SLC25A39Q9BZJ4 359 aaPredicted RBP13.89□□□□□ -0.19
TRAM1-201ENST00000262213 HSPB8Q9UJY1 196 aa13.89□□□□□ -0.19
TRAM1-201ENST00000262213 K7EM74 188 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 LOXP28300 417 aaPredicted RBP13.88□□□□□ -0.19
TRAM1-201ENST00000262213 CDKN1BP46527 198 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 BSPH1Q075Z2 132 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 PET117Q6UWS5 81 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 PRSS3P2Q8NHM4 247 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 GFRA4Q9GZZ7 299 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 OTORQ9NRC9 128 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 S4R3C0 116 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 A0A1B0GUT8 65 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 SERTM2A0A1B0GWG4 89 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 IGLV2-11P01706 119 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 FAM106CPP0CH98 169 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 MC5RP33032 325 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 UQCRFS1P47985 274 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 FAM106AQ4KMX7 169 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 OR8A1Q8NGG7 326 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 FBXL15Q9H469 300 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 DMXL1Q9Y485 3027 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 C12orf54Q6X4T0 127 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 DEFB125Q8N687 156 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 PRSS33Q8NF86 280 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 VPS25Q9BRG1 176 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 AP5S1Q9NUS5 200 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 C1RLQ9NZP8 487 aa13.88□□□□□ -0.19
TRAM1-201ENST00000262213 TTC28Q96AY4 2481 aa13.87□□□□□ -0.19
TRAM1-201ENST00000262213 HAX1O00165 279 aa13.87□□□□□ -0.19
TRAM1-201ENST00000262213 IGHV1-8P0DP01 117 aa13.87□□□□□ -0.19
TRAM1-201ENST00000262213 LGALS7P47929 136 aa13.87□□□□□ -0.19
TRAM1-201ENST00000262213 FA2HQ7L5A8 372 aa13.87□□□□□ -0.19
TRAM1-201ENST00000262213 NEU4Q8WWR8 484 aaPredicted RBP13.87□□□□□ -0.19
TRAM1-201ENST00000262213 PIEZO2Q9H5I5 2752 aa13.87□□□□□ -0.19
TRAM1-201ENST00000262213 PLGLAQ15195 96 aa13.87□□□□□ -0.19
TRAM1-201ENST00000262213 ZNF785A8K8V0 405 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 PSG9Q00887 426 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 C3orf36Q3SXR2 165 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 RASL11BQ9BPW5 248 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 SIGLEC9Q9Y336 463 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 ZZEF1O43149 2961 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 NPIPB6E9PJ23 425 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 COX7A1P24310 79 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 GPR183P32249 361 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 IGFBPL1Q8WX77 278 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 CST9LQ9H4G1 147 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 CUL9Q8IWT3 2517 aa13.86□□□□□ -0.19
TRAM1-201ENST00000262213 TRAV8-6A0A0B4J262 113 aa13.85□□□□□ -0.19
TRAM1-201ENST00000262213 IGLC1P0CG04 106 aa13.85□□□□□ -0.19
TRAM1-201ENST00000262213 LOXL1Q08397 574 aaPredicted RBP13.85□□□□□ -0.19
TRAM1-201ENST00000262213 LINC00311Q8N616 119 aa13.85□□□□□ -0.19
TRAM1-201ENST00000262213 INSIG2Q9Y5U4 225 aa13.85□□□□□ -0.19
TRAM1-201ENST00000262213 F11RQ9Y624 299 aaKnown RBP13.85□□□□□ -0.19
TRAM1-201ENST00000262213 M0R3E3 92 aa13.85□□□□□ -0.19
TRAM1-201ENST00000262213 SAPCD1Q5SSQ6 148 aa13.85□□□□□ -0.19
TRAM1-201ENST00000262213 NUP37Q8NFH4 326 aa13.85□□□□□ -0.19
TRAM1-201ENST00000262213 TMEM133Q9H2Q1 129 aa13.85□□□□□ -0.19
TRAM1-201ENST00000262213 IFI27P40305 119 aaPredicted RBP13.84□□□□□ -0.19
TRAM1-201ENST00000262213 RIGQ13278 110 aa13.84□□□□□ -0.19
TRAM1-201ENST00000262213 DYNLRB1Q9NP97 96 aa13.84□□□□□ -0.19
TRAM1-201ENST00000262213 ACACAQ13085 2346 aa13.84□□□□□ -0.19
TRAM1-201ENST00000262213 DLX6P56179 175 aa13.84□□□□□ -0.19
TRAM1-201ENST00000262213 RHOGP84095 191 aa13.84□□□□□ -0.19
TRAM1-201ENST00000262213 HIST1H1AQ02539 215 aaPredicted RBP13.84□□□□□ -0.19
TRAM1-201ENST00000262213 TMEM155Q4W5P6 130 aa13.84□□□□□ -0.19
TRAM1-201ENST00000262213 LINC01545Q5VT33 79 aa13.84□□□□□ -0.19
TRAM1-201ENST00000262213 FAM71F2Q6NXP2 309 aa13.84□□□□□ -0.19
TRAM1-201ENST00000262213 NAA38Q9BRA0 125 aaKnown RBP13.84□□□□□ -0.19
TRAM1-201ENST00000262213 APC2O95996 2303 aa13.84□□□□□ -0.19
TRAM1-201ENST00000262213 PPP1R27Q86WC6 154 aa13.83□□□□□ -0.19
TRAM1-201ENST00000262213 BPIFA4PQ86YQ2 179 aa13.83□□□□□ -0.19
TRAM1-201ENST00000262213 C8orf49Q96NF6 230 aa13.83□□□□□ -0.19
TRAM1-201ENST00000262213 ZNF747Q9BV97 191 aa13.83□□□□□ -0.19
TRAM1-201ENST00000262213 LYNX1G3V0Z9 82 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 C16orf97H3BN30 126 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 LYNX1P0DP58 116 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 COTL1Q14019 142 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 NGBQ9NPG2 151 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 PSG8Q9UQ74 426 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 OTOGLQ3ZCN5 2332 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 FAM231BA6NCW3 169 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 TEX22C9J3V5 150 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 SPTBN2O15020 2390 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 CNIH1O95406 144 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 MS4A6AQ9H2W1 248 aa13.83□□□□□ -0.2
TRAM1-201ENST00000262213 OVOL3O00110 214 aa13.82□□□□□ -0.2
TRAM1-201ENST00000262213 OCIAD2Q56VL3 154 aa13.82□□□□□ -0.2
TRAM1-201ENST00000262213 C2orf91Q6ZV80 131 aa13.82□□□□□ -0.2
TRAM1-201ENST00000262213 TMEM213A2RRL7 107 aa13.82□□□□□ -0.2
TRAM1-201ENST00000262213 C7orf71A4D174 169 aa13.82□□□□□ -0.2
TRAM1-201ENST00000262213 CSN1S1P47710 185 aa13.82□□□□□ -0.2
TRAM1-201ENST00000262213 CRIP1P50238 77 aa13.82□□□□□ -0.2
TRAM1-201ENST00000262213 PLP1P60201 277 aa13.82□□□□□ -0.2
TRAM1-201ENST00000262213 NHLH1Q02575 133 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms