RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 UHRF2Q96PU4 802 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 SCO2A0A1W2PP80 73 aa13.41□□□□□ -0.26
HOXC6-201ENST00000243108 A0A1W2PRE2 83 aa13.41□□□□□ -0.26
HOXC6-201ENST00000243108 HYPMO75409 117 aa13.41□□□□□ -0.26
HOXC6-201ENST00000243108 PSG1P11464 419 aa13.41□□□□□ -0.26
HOXC6-201ENST00000243108 FOLR2P14207 255 aa13.41□□□□□ -0.26
HOXC6-201ENST00000243108 TIGITQ495A1 244 aa13.41□□□□□ -0.26
HOXC6-201ENST00000243108 LINC00305Q7Z4B0 112 aa13.41□□□□□ -0.26
HOXC6-201ENST00000243108 CTDSP1Q9GZU7 261 aa13.41□□□□□ -0.26
HOXC6-201ENST00000243108 FABP1P07148 127 aa13.4□□□□□ -0.26
HOXC6-201ENST00000243108 OR10J4P0C629 311 aa13.4□□□□□ -0.26
HOXC6-201ENST00000243108 ORM2P19652 201 aa13.4□□□□□ -0.26
HOXC6-201ENST00000243108 ADIRFQ15847 76 aa13.4□□□□□ -0.26
HOXC6-201ENST00000243108 RNF212Q495C1 297 aa13.4□□□□□ -0.26
HOXC6-201ENST00000243108 OR1B1Q8NGR6 318 aa13.4□□□□□ -0.26
HOXC6-201ENST00000243108 DERL1Q9BUN8 251 aa13.4□□□□□ -0.26
HOXC6-201ENST00000243108 PRELID1Q9Y255 219 aa13.4□□□□□ -0.26
HOXC6-201ENST00000243108 CD33P20138 364 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 UBE2L3P68036 154 aaKnown RBP13.39□□□□□ -0.27
HOXC6-201ENST00000243108 FAM24BQ8N5W8 94 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 STXBP6Q8NFX7 210 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 PAXXQ9BUH6 204 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 OR51M1Q9H341 326 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 THYN1Q9P016 225 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 TRAV30A0A087WSZ9 112 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 ATP6V0E1O15342 81 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 MFAP4P55083 255 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 LCNL1Q6ZST4 164 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 OR5T1Q8NG75 326 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 FXYD5Q96DB9 178 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 TMEM68Q96MH6 324 aa13.39□□□□□ -0.27
HOXC6-201ENST00000243108 GGTLC3B5MD39 225 aa13.38□□□□□ -0.27
HOXC6-201ENST00000243108 F8W735 103 aaPredicted RBP13.38□□□□□ -0.27
HOXC6-201ENST00000243108 TOMM40O96008 361 aa13.38□□□□□ -0.27
HOXC6-201ENST00000243108 PF4P02776 101 aa13.38□□□□□ -0.27
HOXC6-201ENST00000243108 RD3LP0DJH9 198 aa13.38□□□□□ -0.27
HOXC6-201ENST00000243108 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
HOXC6-201ENST00000243108 LINC01551Q86U37 167 aa13.38□□□□□ -0.27
HOXC6-201ENST00000243108 LINC00482Q8N8I6 264 aa13.38□□□□□ -0.27
HOXC6-201ENST00000243108 TRBV20OR9-2A0A075B6H5 130 aa13.37□□□□□ -0.27
HOXC6-201ENST00000243108 NDUFB8O95169 186 aa13.37□□□□□ -0.27
HOXC6-201ENST00000243108 PYYP10082 97 aa13.37□□□□□ -0.27
HOXC6-201ENST00000243108 FCGR2BP31994 310 aaPredicted RBP13.37□□□□□ -0.27
HOXC6-201ENST00000243108 YPEL3P61236 119 aaPredicted RBP13.37□□□□□ -0.27
HOXC6-201ENST00000243108 ELOBQ15370 118 aa13.37□□□□□ -0.27
HOXC6-201ENST00000243108 C8orf86Q6ZUL3 223 aa13.37□□□□□ -0.27
HOXC6-201ENST00000243108 AURKAIP1Q9NWT8 199 aaPredicted RBP13.37□□□□□ -0.27
HOXC6-201ENST00000243108 MRPL27Q9P0M9 148 aaKnown RBP13.37□□□□□ -0.27
HOXC6-201ENST00000243108 HIGD1AQ9Y241 93 aa13.37□□□□□ -0.27
HOXC6-201ENST00000243108 COL7A1Q02388 2944 aa13.37□□□□□ -0.27
HOXC6-201ENST00000243108 AP4M1O00189 453 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 RAB5AP20339 215 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 LYZP61626 148 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 CFHR3Q02985 330 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 ZNF343Q6P1L6 599 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 UNQ5815/PRO19632Q6UWF5 114 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 C21orf62Q9NYP8 219 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 C9JCJ5 164 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 GNG7O60262 68 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 OR2J3O76001 311 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 RPLP1P05386 114 aaKnown RBP13.36□□□□□ -0.27
HOXC6-201ENST00000243108 GP9P14770 177 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 CRIP2P52943 208 aaPredicted RBP13.36□□□□□ -0.27
HOXC6-201ENST00000243108 VN1R17PQ8TDU5 208 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 DUX3Q96PT4 197 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 TXN2Q99757 166 aa13.36□□□□□ -0.27
HOXC6-201ENST00000243108 SLC35B1P78383 322 aa13.35□□□□□ -0.27
HOXC6-201ENST00000243108 FLI1Q01543 452 aaPredicted RBP13.35□□□□□ -0.27
HOXC6-201ENST00000243108 ECSCRQ19T08 205 aa13.35□□□□□ -0.27
HOXC6-201ENST00000243108 C2CD4CQ8TF44 421 aa13.35□□□□□ -0.27
HOXC6-201ENST00000243108 Q8WTZ3 238 aa13.35□□□□□ -0.27
HOXC6-201ENST00000243108 ANAPC16Q96DE5 110 aa13.35□□□□□ -0.27
HOXC6-201ENST00000243108 FBXL7Q9UJT9 491 aa13.35□□□□□ -0.27
HOXC6-201ENST00000243108 LY96Q9Y6Y9 160 aa13.35□□□□□ -0.27
HOXC6-201ENST00000243108 TRBV9A0A0B4J1U6 114 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 WI2-2373I1.2A0A1W2PRP0 233 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 KRTAP10-11P60412 298 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 SUMO1P63165 101 aaKnown RBP13.34□□□□□ -0.27
HOXC6-201ENST00000243108 C19orf54Q5BKX5 351 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 TEX38Q6PEX7 206 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 ZNF491Q8N8L2 437 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 KLHL30-AS1Q8NEE0 82 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 ELOVL1Q9BW60 279 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 SLC25A39Q9BZJ4 359 aaPredicted RBP13.34□□□□□ -0.27
HOXC6-201ENST00000243108 MLXQ9UH92 298 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 S4R3C0 116 aa13.34□□□□□ -0.27
HOXC6-201ENST00000243108 CRYBB3P26998 211 aa13.33□□□□□ -0.27
HOXC6-201ENST00000243108 MYCNOSP40205 109 aa13.33□□□□□ -0.27
HOXC6-201ENST00000243108 RPL35P42766 123 aaKnown RBP13.33□□□□□ -0.27
HOXC6-201ENST00000243108 REC114Q7Z4M0 266 aa13.33□□□□□ -0.27
HOXC6-201ENST00000243108 RNF152Q8N8N0 203 aa13.33□□□□□ -0.27
HOXC6-201ENST00000243108 TCEAL7Q9BRU2 100 aa13.33□□□□□ -0.27
HOXC6-201ENST00000243108 TMEM14CQ9P0S9 112 aa13.33□□□□□ -0.27
HOXC6-201ENST00000243108 IGF1P05019 195 aa13.33□□□□□ -0.28
HOXC6-201ENST00000243108 CXCL1P09341 107 aa13.33□□□□□ -0.28
HOXC6-201ENST00000243108 DEFB136Q30KP8 78 aa13.33□□□□□ -0.28
HOXC6-201ENST00000243108 Q56UQ5 140 aa13.33□□□□□ -0.28
HOXC6-201ENST00000243108 RNF125Q96EQ8 232 aa13.33□□□□□ -0.28
HOXC6-201ENST00000243108 RAX2Q96IS3 184 aa13.33□□□□□ -0.28
HOXC6-201ENST00000243108 SHANK2-AS3Q9BTD1 123 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms