RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 C7orf77A4D0Y5 90 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 G3V318 75 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 TGOLN2O43493 480 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 ZNF253O75346 499 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 IGHG4P01861 327 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 TRGV3P03979 118 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 GP9P14770 177 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 RPL7P18124 248 aaKnown RBP10.24□□□□□ -0.77
SLIRP-201ENST00000238688 SLC35B1P78383 322 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 C9orf152Q5JTZ5 239 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 PRR31Q5SQ13 230 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 ZNF343Q6P1L6 599 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 SHISA2Q6UWI4 295 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 Q8N2B8 174 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 OR4F17Q8NGA8 305 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 FXYD5Q96DB9 178 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 RABAC1Q9UI14 185 aa10.24□□□□□ -0.77
SLIRP-201ENST00000238688 PUS1Q9Y606 427 aaKnown RBP eCLIP10.24□□□□□ -0.77
SLIRP-201ENST00000238688 IGHV3-21A0A0B4J1V1 117 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 FAM181BA6NEQ2 426 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 TSPAN4O14817 238 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 PPP1R2P9O14990 202 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 MT-ND4LP03901 98 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 NBEAP1P0C6P0 100 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 UBE2G2P60604 165 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 BTN1A1Q13410 526 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 C15orf54Q8N8G6 183 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 BTF3L4Q96K17 158 aa10.23□□□□□ -0.77
SLIRP-201ENST00000238688 YTHDF2Q9Y5A9 579 aaKnown RBP10.23□□□□□ -0.77
SLIRP-201ENST00000238688 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.22□□□□□ -0.77
SLIRP-201ENST00000238688 SERTM2A0A1B0GWG4 89 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 OR2T8A6NH00 312 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 FBLL1A6NHQ2 334 aaKnown RBP10.22□□□□□ -0.77
SLIRP-201ENST00000238688 CLEC3BP05452 202 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 ELANEP08246 267 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 ATP5G3P48201 142 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 CEBPGP53567 150 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 TPPP2P59282 170 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 TAS2R60P59551 318 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 FOXE3Q13461 319 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 ATRAIDQ6UW56 229 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 C5orf17Q8NAS9 161 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 ANAPC16Q96DE5 110 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 CCDC140Q96MF4 163 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 RPS10P5Q9NQ39 176 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 OTORQ9NRC9 128 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 CLEC5AQ9NY25 188 aa10.22□□□□□ -0.77
SLIRP-201ENST00000238688 ZNF98A6NK75 572 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 LINC01548A6NM66 108 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 DNASE2O00115 360 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-201ENST00000238688 NDUFA4O00483 81 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 WIPF1O43516 503 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 GPR183P32249 361 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 ADMP35318 185 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 MYCNOSP40205 109 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 KRTAP10-3P60369 221 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 BLCAPP62952 87 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 RNF152Q8N8N0 203 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 WFDC12Q8WWY7 111 aa10.21□□□□□ -0.77
SLIRP-201ENST00000238688 VWFP04275 2813 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 MEGF8Q7Z7M0 2845 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 GGTLC3B5MD39 225 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 NDUFB4O95168 129 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 NDUFA7O95182 113 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 PSMB8P28062 276 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 CNN1P51911 297 aaKnown RBP10.2□□□□□ -0.78
SLIRP-201ENST00000238688 PSG9Q00887 426 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 MORN5Q5VZ52 161 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 TEX38Q6PEX7 206 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 C2CD4CQ8TF44 421 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 METTL26Q96S19 204 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 BIN3Q9NQY0 253 aa10.2□□□□□ -0.78
SLIRP-201ENST00000238688 TRAV5A0A0B4J249 113 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 HELTA6NFD8 242 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 SCO1O75880 301 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 OR10J4P0C629 311 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 IGLC2P0DOY2 106 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 BMI1P35226 326 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 SUMO1P63165 101 aaKnown RBP10.19□□□□□ -0.78
SLIRP-201ENST00000238688 USF2Q15853 346 aaPredicted RBP10.19□□□□□ -0.78
SLIRP-201ENST00000238688 SAMD13Q5VXD3 122 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 IMMP2LQ96T52 175 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 ATG101Q9BSB4 218 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 CHRDL1Q9BU40 450 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 ELOVL1Q9BW60 279 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 ZFAND3Q9H8U3 227 aa10.19□□□□□ -0.78
SLIRP-201ENST00000238688 NOTCH1P46531 2555 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 TRBV19A0A075B6N1 114 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 A0A087X0K7 114 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 TRBV6-1A0A0K0K1D8 114 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 SCO2A0A1W2PP80 73 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 K7EQM0 130 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 PEX7O00628 323 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 EIF3GO75821 320 aaKnown RBP eCLIP10.18□□□□□ -0.783e-6■□□□□ 9.7
SLIRP-201ENST00000238688 PYYP10082 97 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 PF4V1P10720 104 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 NPPCP23582 126 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 CRYBB3P26998 211 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 ARL3P36405 182 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 AKR1C3P42330 323 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms