RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 ZNF48Q96MX3 618 aaPredicted RBP11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 G3V318 75 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 CA1P00915 261 aaPredicted RBP11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 FCGR2BP31994 310 aaPredicted RBP11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 TMEM183BQ1AE95 376 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 THYN1Q9P016 225 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 CBY1Q9Y3M2 126 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 TRAPPC1Q9Y5R8 145 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 A1L4Q6 167 aa11.27□□□□□ -0.6
PRKAB1-201ENST00000229328 PRB4P10163 310 aaPredicted RBP11.27□□□□□ -0.6
PRKAB1-201ENST00000229328 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.6
PRKAB1-201ENST00000229328 FAM110DQ8TAY7 271 aaPredicted RBP11.27□□□□□ -0.6
PRKAB1-201ENST00000229328 CHRDL1Q9BU40 450 aa11.27□□□□□ -0.6
PRKAB1-201ENST00000229328 PRO1933Q9H354 126 aa11.27□□□□□ -0.6
PRKAB1-201ENST00000229328 CTSGP08311 255 aa11.27□□□□□ -0.61
PRKAB1-201ENST00000229328 TCL1AP56279 114 aa11.27□□□□□ -0.61
PRKAB1-201ENST00000229328 C5orf17Q8NAS9 161 aa11.27□□□□□ -0.61
PRKAB1-201ENST00000229328 OR10D4PQ8NGN7 298 aa11.27□□□□□ -0.61
PRKAB1-201ENST00000229328 ATG101Q9BSB4 218 aa11.27□□□□□ -0.61
PRKAB1-201ENST00000229328 SERTAD4Q9NUC0 356 aa11.27□□□□□ -0.61
PRKAB1-201ENST00000229328 PITPNC1Q9UKF7 332 aa11.27□□□□□ -0.61
PRKAB1-201ENST00000229328 KLF12Q9Y4X4 402 aa11.27□□□□□ -0.61
PRKAB1-201ENST00000229328 XKRY2A2RUG3 117 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 SPINK4O60575 86 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 TCRAP04437 139 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 CBLN1P23435 193 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 PCP4P48539 62 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 UBE2G1P62253 170 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 BTF3L4Q96K17 158 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 POLQO75417 2590 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 MRPS12O15235 138 aaKnown RBP11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 AMY1AP04745 511 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 IGLC2P0DOY2 106 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 ADMP35318 185 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 SLC35B1P78383 322 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 PRR27Q6MZM9 219 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 BPIFA4PQ86YQ2 179 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 C7orf69Q9H7B7 122 aa11.26□□□□□ -0.61
PRKAB1-201ENST00000229328 TRBV19A0A075B6N1 114 aa11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 IGHV3-35A0A0C4DH35 117 aa11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 MSMBP08118 114 aa11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 ZNF414Q96IQ9 312 aa11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 ZNF705GA8MUZ8 300 aaPredicted RBP11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 Q71RC1 249 aaPredicted RBP11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 NUDT11Q96G61 164 aa11.25□□□□□ -0.61
PRKAB1-201ENST00000229328 TRAV9-1A0A075B6T8 112 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 TRAV8-1A0A0A6YYK1 113 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 FABP4P15090 132 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 NUTF2P61970 127 aaKnown RBP11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 RHOGP84095 191 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 AVPP01185 164 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 IER3P46695 156 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 DNLZQ5SXM8 178 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 TMEM183AQ8IXX5 376 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 OR4F17Q8NGA8 305 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 MS4A10Q96PG2 267 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 MLST8Q9BVC4 326 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 MEGF9Q9H1U4 602 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 LINC00527Q9UJ94 153 aa11.24□□□□□ -0.61
PRKAB1-201ENST00000229328 TRBV9A0A0B4J1U6 114 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 SMIM27A0A1W2PRY6 76 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 GPR183P32249 361 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 SIGLEC15Q6ZMC9 328 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 ZNF502Q8TBZ5 544 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 GPR82Q96P67 336 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 HIF1ANQ9NWT6 349 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 MOB4Q9Y3A3 225 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 A0A1B0GUS0 222 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 COA6Q5JTJ3 125 aaKnown RBP11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 FAM231DQ6ZW35 169 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 VN1R17PQ8TDU5 208 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 MBD6Q96DN6 1003 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 HIST1H2BLQ99880 126 aa11.23□□□□□ -0.61
PRKAB1-201ENST00000229328 LTAP01374 205 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 COX6B1P14854 86 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 LY6EQ16553 131 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 KLK9Q2XQG4 91 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 GOLT1AQ6ZVE7 132 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 FMC1Q96HJ9 113 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 KLK9Q9UKQ9 250 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 CLEC3BP05452 202 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 G0S2P27469 103 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 TXN2Q99757 166 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 MRPL18Q9H0U6 180 aaKnown RBP11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 ANKRD17O75179 2603 aaKnown RBP11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 PAX1P15863 534 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 CMTM2Q8TAZ6 248 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 ASCL2Q99929 193 aa11.22□□□□□ -0.61
PRKAB1-201ENST00000229328 SNURFLB1AK76 121 aa11.21□□□□□ -0.61
PRKAB1-201ENST00000229328 MRPL54Q6P161 138 aaKnown RBP11.21□□□□□ -0.61
PRKAB1-201ENST00000229328 B4DSR2 109 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms