RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Fam78bQ8BQN5 261 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Pcgf1Q8R023 259 aaKnown RBP11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Slc37a1Q8R070 531 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr355Q8VFP6 310 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gkn3Q9D0T7 191 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Ms4a4cQ9D3F6 226 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Mad2l1bpQ9DCX1 276 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr872E9PVW2 323 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gm20532G3UXR8 106 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 P01659 112 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Hspb7P35385 169 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Trdv4Q5R1A3 115 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Il31Q6EAL8 163 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Uqcc3Q8K2T4 89 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Vmn1r179Q8R2B4 323 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1009Q8VFK1 314 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1228Q8VGM9 323 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1413Q8VGU3 323 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Egln1Q91YE3 400 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Foxj2Q9ES18 565 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gm12169F2Z474 250 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 CckarO08786 436 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Ucp1P12242 307 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Hist1h1eP43274 219 aaKnown RBP11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Zfp970Q08BU3 522 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Rasl10bQ5SSG5 203 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Hist2h2beQ64524 126 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tbpl2Q6SJ95 350 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Spcs3Q6ZWQ7 180 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Prss33Q80WM7 277 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Lypd6Q8BPP5 171 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gas2l1Q8JZP9 678 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr354Q8VGJ8 317 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Vmn1r44Q9EQ47 310 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Vmn1r47Q9EQ51 310 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Lhx2Q9Z0S2 406 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Vsig2Q9Z109 328 aa11.29□□□□□ -0.6
Nup88-201ENSMUST00000035283 Trav4-2A0A075B638 110 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Arl16B1ATY8 173 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr920E9Q413 310 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Timp1P12032 205 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Vamp3P63024 103 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Clpsl2Q3UW21 102 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 MaoaQ64133 526 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Zfp273Q7M6W8 501 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 D330020A13RikQ8C799 211 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Psg16Q8K0U8 395 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1350Q8VF34 308 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Eml6Q5SQM0 1958 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Trav18A0A075B656 109 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gm28845A0A087WR76 214 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Zfp971A2BFG8 470 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1328B1ARV2 313 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gm14288E9Q9W0 88 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr906K7N5P3 311 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Nutf2P61971 127 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 CiartQ3TQ03 375 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Zfp941Q3URY5 674 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Mbd3l2Q3UXB0 228 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Znf474Q6V5K9 347 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 BsxQ810B3 232 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Dcaf12Q8BGZ3 453 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Q8BTG6 205 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 9030612E09RikQ8CE20 140 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1445Q8VFW9 314 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Pnpla3Q91WW7 413 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Sfxn4Q925N1 313 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tmem147Q9CQG6 224 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Q9DAN9 164 aa11.28□□□□□ -0.6
Nup88-201ENSMUST00000035283 Vps13cQ8BX70 3748 aa11.27□□□□□ -0.6
Nup88-201ENSMUST00000035283 Ighv1-18A0A0A6YXN4 117 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Igkv14-111A0A140T8P9 117 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Dynlt3P56387 116 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Mpc1P63030 109 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cnn1Q08091 297 aaKnown RBP11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Lpar5Q149R9 372 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr924Q7TRB8 308 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Q80VP5 184 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Aph1aQ8BVF7 265 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr493Q8VEW5 314 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr116Q923Q6 321 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Epdr1Q99M71 224 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Anapc16Q9CPV2 110 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Hsd17b6Q9R092 317 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Zfp407G3UVV3 2246 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ighv6-3A0A075B5T2 118 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 A0A286YCQ8 80 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm14412A2ARR7 526 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cpsf4lE9Q2N0 280 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Stfa1P35175 97 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ccr8P56484 353 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gnb1P62874 340 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 SgcbP82349 320 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Nhlh2Q64221 135 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr93Q6UAH1 312 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Prss54Q7M756 383 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr917Q7TRC3 309 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr358Q7TRY5 330 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cds2Q99L43 444 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 Dusp3Q9D7X3 185 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms