RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W PRC1P00729 532 aa1.94□□□□□ -2.1
CTF4YPR135W TUB1P09733 447 aaKnown RBP1.94□□□□□ -2.1
CTF4YPR135W PCK1P10963 549 aa1.94□□□□□ -2.1
CTF4YPR135W AGP1P25376 633 aa1.94□□□□□ -2.1
CTF4YPR135W MSH2P25847 964 aa1.94□□□□□ -2.1
CTF4YPR135W RPL8BP29453 256 aaKnown RBP1.94□□□□□ -2.1
CTF4YPR135W TFC4P33339 1025 aa1.94□□□□□ -2.1
CTF4YPR135W FLO10P36170 1169 aa1.94□□□□□ -2.1
CTF4YPR135W PBY1P38254 753 aa1.94□□□□□ -2.1
CTF4YPR135W RIM4P38741 713 aa1.94□□□□□ -2.1
CTF4YPR135W YDR306CQ06640 478 aa1.94□□□□□ -2.1
CTF4YPR135W MET3P08536 511 aa1.93□□□□□ -2.1
CTF4YPR135W MAS2P11914 482 aa1.93□□□□□ -2.1
CTF4YPR135W HOM2P13663 365 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W GFA1P14742 717 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W APE1P14904 514 aa1.93□□□□□ -2.1
CTF4YPR135W MEF1P25039 761 aa1.93□□□□□ -2.1
CTF4YPR135W TMT1P32643 299 aa1.93□□□□□ -2.1
CTF4YPR135W TGL1P34163 548 aa1.93□□□□□ -2.1
CTF4YPR135W ALD5P40047 520 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W YFL052WP43551 465 aa1.93□□□□□ -2.1
CTF4YPR135W DAS1P47005 663 aa1.93□□□□□ -2.1
CTF4YPR135W COG6P53959 839 aa1.93□□□□□ -2.1
CTF4YPR135W SNF1P06782 633 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W MPH2P0CD99 609 aa1.93□□□□□ -2.1
CTF4YPR135W ECM32P32644 1121 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W ELO3P40319 345 aa1.93□□□□□ -2.1
CTF4YPR135W GPP1P41277 250 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W TAH11P47112 604 aa1.93□□□□□ -2.1
CTF4YPR135W ERP6P53198 216 aa1.93□□□□□ -2.1
CTF4YPR135W YGR021WP53212 290 aa1.93□□□□□ -2.1
CTF4YPR135W SOL4P53315 255 aa1.93□□□□□ -2.1
CTF4YPR135W YGR266WP53326 701 aa1.93□□□□□ -2.1
CTF4YPR135W CEF1Q03654 590 aaPredicted RBP1.93□□□□□ -2.1
CTF4YPR135W COQ11Q05892 277 aa1.93□□□□□ -2.1
CTF4YPR135W THI7Q05998 598 aa1.93□□□□□ -2.1
CTF4YPR135W FMP25Q08023 583 aa1.93□□□□□ -2.1
CTF4YPR135W RPS9AO13516 197 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W RAD18P10862 487 aa1.93□□□□□ -2.1
CTF4YPR135W HSP60P19882 572 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W ARE1P25628 610 aa1.93□□□□□ -2.1
CTF4YPR135W CDC48P25694 835 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W RPC82P32349 654 aa1.93□□□□□ -2.1
CTF4YPR135W CDC12P32468 407 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W HIR1P32479 840 aa1.93□□□□□ -2.1
CTF4YPR135W ABD1P32783 436 aaPredicted RBP1.93□□□□□ -2.1
CTF4YPR135W APN2P38207 520 aa1.93□□□□□ -2.1
CTF4YPR135W FMO1P38866 432 aa1.93□□□□□ -2.1
CTF4YPR135W BUD16P39988 312 aa1.93□□□□□ -2.1
CTF4YPR135W VID27P40157 782 aa1.93□□□□□ -2.1
CTF4YPR135W HOS4P40480 1083 aa1.93□□□□□ -2.1
CTF4YPR135W YGR237CP50089 785 aa1.93□□□□□ -2.1
CTF4YPR135W VPS73P53142 486 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W YAT1P80235 687 aa1.93□□□□□ -2.1
CTF4YPR135W SRP1Q02821 542 aaKnown RBP1.93□□□□□ -2.1
CTF4YPR135W TFB2Q02939 513 aa1.93□□□□□ -2.1
CTF4YPR135W ATG16Q03818 150 aa1.93□□□□□ -2.1
CTF4YPR135W SHE9Q04172 456 aa1.93□□□□□ -2.1
CTF4YPR135W YLR455WQ06188 304 aa1.93□□□□□ -2.1
CTF4YPR135W NSE1Q07913 336 aa1.93□□□□□ -2.1
CTF4YPR135W YNL162W-AQ3E7A8 72 aa1.93□□□□□ -2.1
CTF4YPR135W NOT3P06102 836 aaKnown RBP1.92□□□□□ -2.1
CTF4YPR135W RFS1P38234 210 aaKnown RBP1.92□□□□□ -2.1
CTF4YPR135W IRR1P40541 1150 aa1.92□□□□□ -2.1
CTF4YPR135W DLT1Q04216 342 aa1.92□□□□□ -2.1
CTF4YPR135W YLR001CQ07895 862 aa1.92□□□□□ -2.1
CTF4YPR135W ATG11Q12527 1178 aa1.92□□□□□ -2.1
CTF4YPR135W MPD2Q99316 277 aa1.92□□□□□ -2.1
CTF4YPR135W BEM2P39960 2167 aaKnown RBP1.92□□□□□ -2.1
CTF4YPR135W AAR2P32357 355 aaPredicted RBP1.92□□□□□ -2.1
CTF4YPR135W VBA5P36172 582 aa1.92□□□□□ -2.1
CTF4YPR135W PCL5P38794 229 aa1.92□□□□□ -2.1
CTF4YPR135W MAM1P40065 302 aa1.92□□□□□ -2.1
CTF4YPR135W MMF1P40185 145 aaKnown RBP1.92□□□□□ -2.1
CTF4YPR135W FKH2P41813 862 aa1.92□□□□□ -2.1
CTF4YPR135W INM2Q05533 292 aa1.92□□□□□ -2.1
CTF4YPR135W ENT2Q05785 613 aa1.92□□□□□ -2.1
CTF4YPR135W ADY4Q05955 493 aa1.92□□□□□ -2.1
CTF4YPR135W SPH1Q06160 661 aa1.92□□□□□ -2.1
CTF4YPR135W THI73Q07904 523 aa1.92□□□□□ -2.1
CTF4YPR135W BMS1Q08965 1183 aaKnown RBP1.92□□□□□ -2.1
CTF4YPR135W APA1P16550 321 aaKnown RBP1.91□□□□□ -2.1
CTF4YPR135W HCA4P20448 770 aaKnown RBP1.91□□□□□ -2.1
CTF4YPR135W PLC1P32383 869 aa1.91□□□□□ -2.1
CTF4YPR135W CTF13P35203 478 aa1.91□□□□□ -2.1
CTF4YPR135W YBR071WP38243 211 aa1.91□□□□□ -2.1
CTF4YPR135W LEU5P38702 357 aa1.91□□□□□ -2.1
CTF4YPR135W YIR042CP40586 236 aa1.91□□□□□ -2.1
CTF4YPR135W GYP7P48365 746 aa1.91□□□□□ -2.1
CTF4YPR135W HEF3P53978 1044 aaKnown RBP1.91□□□□□ -2.1
CTF4YPR135W VPS30Q02948 557 aa1.91□□□□□ -2.1
CTF4YPR135W DUS3Q06053 668 aaKnown RBP1.91□□□□□ -2.1
CTF4YPR135W SNU66Q12420 587 aaPredicted RBP1.91□□□□□ -2.1
CTF4YPR135W IRA1P18963 3092 aa1.91□□□□□ -2.1
CTF4YPR135W ADE8P04161 214 aa1.91□□□□□ -2.1
CTF4YPR135W ATP4P05626 244 aa1.91□□□□□ -2.1
CTF4YPR135W SAM1P10659 382 aaKnown RBP1.91□□□□□ -2.1
CTF4YPR135W TOP3P13099 656 aa1.91□□□□□ -2.1
CTF4YPR135W TKL1P23254 680 aaKnown RBP1.91□□□□□ -2.1
CTF4YPR135W PRE8P23639 250 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms