RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C GSF2Q04697 403 aaKnown RBP3.63□□□□□ -1.83
RPC40YPR110C CIA1Q05583 330 aa3.63□□□□□ -1.83
RPC40YPR110C CRD1Q07560 283 aa3.63□□□□□ -1.83
RPC40YPR110C AAD4Q07747 329 aa3.63□□□□□ -1.83
RPC40YPR110C TUB2P02557 457 aaKnown RBP3.62□□□□□ -1.83
RPC40YPR110C APA1P16550 321 aaKnown RBP3.62□□□□□ -1.83
RPC40YPR110C FUB1P25659 250 aa3.62□□□□□ -1.83
RPC40YPR110C DBF20P32328 564 aa3.62□□□□□ -1.83
RPC40YPR110C APM3P38153 483 aa3.62□□□□□ -1.83
RPC40YPR110C YJL193WP39542 402 aa3.62□□□□□ -1.83
RPC40YPR110C SPC72P39723 622 aa3.62□□□□□ -1.83
RPC40YPR110C MDR1P53258 950 aa3.62□□□□□ -1.83
RPC40YPR110C MOT3P54785 490 aaKnown RBP3.62□□□□□ -1.83
RPC40YPR110C YSH1Q06224 779 aaPredicted RBP3.62□□□□□ -1.83
RPC40YPR110C YDL086WQ07505 273 aa3.62□□□□□ -1.83
RPC40YPR110C ABF1P14164 731 aa3.61□□□□□ -1.83
RPC40YPR110C SIR1P21691 654 aa3.61□□□□□ -1.83
RPC40YPR110C MCM3P24279 971 aaKnown RBP3.61□□□□□ -1.83
RPC40YPR110C FRD1P32614 470 aaKnown RBP3.61□□□□□ -1.83
RPC40YPR110C MRS6P32864 603 aaKnown RBP3.61□□□□□ -1.83
RPC40YPR110C SET3P36124 751 aa3.61□□□□□ -1.83
RPC40YPR110C UBS1P38290 277 aa3.61□□□□□ -1.83
RPC40YPR110C YHR097CP38809 366 aaKnown RBP3.61□□□□□ -1.83
RPC40YPR110C STT3P39007 718 aaKnown RBP3.61□□□□□ -1.83
RPC40YPR110C YEL025CP39991 1188 aa3.61□□□□□ -1.83
RPC40YPR110C ARG2P40360 574 aa3.61□□□□□ -1.83
RPC40YPR110C NDC80P40460 691 aa3.61□□□□□ -1.83
RPC40YPR110C YGR151CP53287 111 aa3.61□□□□□ -1.83
RPC40YPR110C SNF12P53628 566 aa3.61□□□□□ -1.83
RPC40YPR110C CPR6P53691 371 aaKnown RBP3.61□□□□□ -1.83
RPC40YPR110C ACS1Q01574 713 aa3.61□□□□□ -1.83
RPC40YPR110C TIM50Q02776 476 aa3.61□□□□□ -1.83
RPC40YPR110C EFR3Q03653 782 aaKnown RBP3.61□□□□□ -1.83
RPC40YPR110C HIM1Q06674 414 aa3.61□□□□□ -1.83
RPC40YPR110C USV1Q12132 391 aa3.61□□□□□ -1.83
RPC40YPR110C ACF2Q12168 779 aa3.61□□□□□ -1.83
RPC40YPR110C SEC12P11655 471 aa3.6□□□□□ -1.83
RPC40YPR110C BIK1P11709 440 aa3.6□□□□□ -1.83
RPC40YPR110C SEC18P18759 758 aaKnown RBP3.6□□□□□ -1.83
RPC40YPR110C CAP1P28495 268 aaKnown RBP3.6□□□□□ -1.83
RPC40YPR110C DHR2P36009 735 aaPredicted RBP3.6□□□□□ -1.83
RPC40YPR110C MRPL7P36519 292 aa3.6□□□□□ -1.83
RPC40YPR110C PPE1P38796 400 aa3.6□□□□□ -1.83
RPC40YPR110C SAP185P40856 1058 aa3.6□□□□□ -1.83
RPC40YPR110C CTR1P49573 406 aa3.6□□□□□ -1.83
RPC40YPR110C CTF4Q01454 927 aa3.6□□□□□ -1.83
RPC40YPR110C ENT2Q05785 613 aa3.6□□□□□ -1.83
RPC40YPR110C BMS1Q08965 1183 aaKnown RBP3.6□□□□□ -1.83
RPC40YPR110C RKI1Q12189 258 aa3.6□□□□□ -1.83
RPC40YPR110C PCL5P38794 229 aa3.59□□□□□ -1.83
RPC40YPR110C POL31P46957 487 aa3.59□□□□□ -1.83
RPC40YPR110C IMA1P53051 589 aa3.59□□□□□ -1.83
RPC40YPR110C SLI1P53304 468 aa3.59□□□□□ -1.83
RPC40YPR110C MUK1Q02866 612 aa3.59□□□□□ -1.83
RPC40YPR110C TRS31Q03337 283 aa3.59□□□□□ -1.83
RPC40YPR110C UFO1Q04511 668 aa3.59□□□□□ -1.83
RPC40YPR110C IWR1Q07532 353 aaPredicted RBP3.59□□□□□ -1.83
RPC40YPR110C MCH5Q08777 521 aa3.59□□□□□ -1.83
RPC40YPR110C TAF3Q12297 353 aa3.59□□□□□ -1.83
RPC40YPR110C PHO5P00635 467 aa3.58□□□□□ -1.84
RPC40YPR110C MIS1P09440 975 aaKnown RBP3.58□□□□□ -1.84
RPC40YPR110C PCK1P10963 549 aa3.58□□□□□ -1.84
RPC40YPR110C VPS34P22543 875 aa3.58□□□□□ -1.84
RPC40YPR110C DSS4P32601 143 aa3.58□□□□□ -1.84
RPC40YPR110C OAR1P35731 278 aa3.58□□□□□ -1.84
RPC40YPR110C GMH1P36125 273 aa3.58□□□□□ -1.84
RPC40YPR110C GLG1P36143 616 aa3.58□□□□□ -1.84
RPC40YPR110C APL3P38065 1025 aa3.58□□□□□ -1.84
RPC40YPR110C KSP1P38691 1029 aaKnown RBP3.58□□□□□ -1.84
RPC40YPR110C VFA1P40080 203 aa3.58□□□□□ -1.84
RPC40YPR110C STB4P50104 949 aa3.58□□□□□ -1.84
RPC40YPR110C COS12P53053 380 aa3.58□□□□□ -1.84
RPC40YPR110C DIP5P53388 608 aa3.58□□□□□ -1.84
RPC40YPR110C SUB1P54000 292 aaKnown RBP3.58□□□□□ -1.84
RPC40YPR110C DAK1P54838 584 aaKnown RBP3.58□□□□□ -1.84
RPC40YPR110C USA1Q03714 838 aa3.58□□□□□ -1.84
RPC40YPR110C BLS1Q06071 122 aa3.58□□□□□ -1.84
RPC40YPR110C HBT1Q07653 1046 aaKnown RBP3.58□□□□□ -1.84
RPC40YPR110C MTF2P10849 440 aa3.57□□□□□ -1.84
RPC40YPR110C GFA1P14742 717 aaKnown RBP3.57□□□□□ -1.84
RPC40YPR110C STE4P18851 423 aa3.57□□□□□ -1.84
RPC40YPR110C YCL049CP25577 312 aa3.57□□□□□ -1.84
RPC40YPR110C CNE1P27825 502 aa3.57□□□□□ -1.84
RPC40YPR110C XRS2P33301 854 aa3.57□□□□□ -1.84
RPC40YPR110C ELF1P36053 145 aa3.57□□□□□ -1.84
RPC40YPR110C EXO84P38261 753 aa3.57□□□□□ -1.84
RPC40YPR110C CBR1P38626 284 aaKnown RBP3.57□□□□□ -1.84
RPC40YPR110C PUG1P40100 303 aa3.57□□□□□ -1.84
RPC40YPR110C THI6P41835 540 aa3.57□□□□□ -1.84
RPC40YPR110C NMA2P53204 395 aa3.57□□□□□ -1.84
RPC40YPR110C ARC35P53731 342 aaKnown RBP3.57□□□□□ -1.84
RPC40YPR110C TIM44Q01852 431 aa3.57□□□□□ -1.84
RPC40YPR110C RPS15Q01855 142 aaKnown RBP3.57□□□□□ -1.84
RPC40YPR110C TRS130Q03660 1102 aa3.57□□□□□ -1.84
RPC40YPR110C ECM16Q04217 1267 aaKnown RBP3.57□□□□□ -1.84
RPC40YPR110C AIM6Q07716 390 aa3.57□□□□□ -1.84
RPC40YPR110C LAM4P38800 1345 aa3.56□□□□□ -1.84
RPC40YPR110C POL3P15436 1097 aa3.56□□□□□ -1.84
RPC40YPR110C NCP1P16603 691 aaKnown RBP3.56□□□□□ -1.84
RPC40YPR110C SWE1P32944 819 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms