RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	SUL2	Q12325	893 aa		4.59	□□□□□ -1.67
PMS1	YNL082W	PSD1	P39006	500 aa		4.59	□□□□□ -1.67
PMS1	YNL082W	ENP2	P48234	707 aa	Known RBP	4.59	□□□□□ -1.67
PMS1	YNL082W	TAM41	P53230	385 aa		4.59	□□□□□ -1.67
PMS1	YNL082W	YNR061C	P53747	219 aa		4.59	□□□□□ -1.67
PMS1	YNL082W	SNO2	P53823	222 aa		4.59	□□□□□ -1.67
PMS1	YNL082W	YFT2	Q06676	274 aa		4.59	□□□□□ -1.67
PMS1	YNL082W	SGO1	Q08490	590 aa		4.59	□□□□□ -1.67
PMS1	YNL082W	DFG16	Q99234	619 aa		4.59	□□□□□ -1.67
PMS1	YNL082W	SSM4	P40318	1319 aa		4.59	□□□□□ -1.67
PMS1	YNL082W	YCR015C	P25616	317 aa		4.59	□□□□□ -1.68
PMS1	YNL082W	FEN2	P25621	512 aa	Known RBP	4.59	□□□□□ -1.68
PMS1	YNL082W	PAH1	P32567	862 aa		4.59	□□□□□ -1.68
PMS1	YNL082W	BCS1	P32839	456 aa		4.59	□□□□□ -1.68
PMS1	YNL082W	FKH2	P41813	862 aa		4.59	□□□□□ -1.68
PMS1	YNL082W	RFX1	P48743	811 aa		4.59	□□□□□ -1.68
PMS1	YNL082W	PSP1	P50896	841 aa	Known RBP	4.59	□□□□□ -1.68
PMS1	YNL082W	YBP2	P53169	641 aa		4.59	□□□□□ -1.68
PMS1	YNL082W	COX18	P53239	316 aa		4.59	□□□□□ -1.68
PMS1	YNL082W	VBA4	Q04602	768 aa	Known RBP	4.59	□□□□□ -1.68
PMS1	YNL082W	RVB2	Q12464	471 aa	Known RBP	4.59	□□□□□ -1.68
PMS1	YNL082W	CDC31	P06704	161 aa	Known RBP	4.58	□□□□□ -1.68
PMS1	YNL082W	RER1	P25560	188 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	PRE2	P30656	287 aa	Known RBP	4.58	□□□□□ -1.68
PMS1	YNL082W	ARP2	P32381	391 aa	Known RBP	4.58	□□□□□ -1.68
PMS1	YNL082W	COS12	P53053	380 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	ARE2	P53629	642 aa	Known RBP	4.58	□□□□□ -1.68
PMS1	YNL082W	TIM10	P87108	93 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	NRG1	Q03125	231 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	SNO4	Q04902	237 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	CDA2	Q06703	312 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	HSP33	Q08914	237 aa	Known RBP	4.58	□□□□□ -1.68
PMS1	YNL082W	HSP32	Q08992	237 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	NUC1	P08466	329 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	BET2	P20133	325 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	ESL2	P36168	1195 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	COS111	P38308	924 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	NOP16	P40007	231 aa	Known RBP	4.58	□□□□□ -1.68
PMS1	YNL082W	SIP4	P46954	829 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	FOL2	P51601	243 aa	Known RBP	4.58	□□□□□ -1.68
PMS1	YNL082W	TRS31	Q03337	283 aa		4.58	□□□□□ -1.68
PMS1	YNL082W	ERG20	P08524	352 aa	Known RBP	4.57	□□□□□ -1.68
PMS1	YNL082W	YIL077C	P40508	320 aa		4.57	□□□□□ -1.68
PMS1	YNL082W	BST1	P43571	1029 aa		4.57	□□□□□ -1.68
PMS1	YNL082W	AIM6	Q07716	390 aa		4.57	□□□□□ -1.68
PMS1	YNL082W	FOB1	O13329	566 aa		4.57	□□□□□ -1.68
PMS1	YNL082W	UBS1	P38290	277 aa		4.57	□□□□□ -1.68
PMS1	YNL082W	YEL068C	P39977	110 aa		4.57	□□□□□ -1.68
PMS1	YNL082W	RXT3	Q07458	294 aa		4.57	□□□□□ -1.68
PMS1	YNL082W	MET5	P47169	1442 aa		4.56	□□□□□ -1.68
PMS1	YNL082W	POL12	P38121	705 aa	Predicted RBP	4.56	□□□□□ -1.68
PMS1	YNL082W	SFB3	P38810	929 aa		4.56	□□□□□ -1.68
PMS1	YNL082W	NUP60	P39705	539 aa		4.56	□□□□□ -1.68
PMS1	YNL082W	LRO1	P40345	661 aa		4.56	□□□□□ -1.68
PMS1	YNL082W	LSB3	P43603	459 aa	Known RBP	4.56	□□□□□ -1.68
PMS1	YNL082W	CRD1	Q07560	283 aa		4.56	□□□□□ -1.68
PMS1	YNL082W	PGA3	Q12746	312 aa	Known RBP	4.56	□□□□□ -1.68
PMS1	YNL082W	RPS13	P05756	151 aa	Known RBP	4.56	□□□□□ -1.68
PMS1	YNL082W	PSF2	P40359	213 aa		4.56	□□□□□ -1.68
PMS1	YNL082W	YGR250C	P53316	781 aa	Known RBP	4.56	□□□□□ -1.68
PMS1	YNL082W	CSR1	Q06705	408 aa	Known RBP	4.56	□□□□□ -1.68
PMS1	YNL082W	ESP1	Q03018	1630 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	SEG2	P34250	1132 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	ARB1	P40024	610 aa	Known RBP	4.55	□□□□□ -1.68
PMS1	YNL082W	RAD26	P40352	1085 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	TMA108	P40462	946 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	FDC1	Q03034	503 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	GAD1	Q04792	585 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	CDC16	P09798	840 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	LAT1	P12695	482 aa	Known RBP	4.55	□□□□□ -1.68
PMS1	YNL082W	RPS7A	P26786	190 aa	Known RBP	4.55	□□□□□ -1.68
PMS1	YNL082W	DCG1	P32460	244 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	SLC1	P33333	303 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	TPA1	P40032	644 aa	Known RBP	4.55	□□□□□ -1.68
PMS1	YNL082W	SPO1	P53541	631 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	STP3	Q05937	343 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	MLH3	Q12083	715 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	HOS1	Q12214	470 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	LTE1	P07866	1435 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	IRC20	Q06554	1556 aa		4.55	□□□□□ -1.68
PMS1	YNL082W	LEU2	P04173	364 aa	Predicted RBP	4.54	□□□□□ -1.68
PMS1	YNL082W	KIN82	P25341	720 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	THI80	P35202	319 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	DHR2	P36009	735 aa	Predicted RBP	4.54	□□□□□ -1.68
PMS1	YNL082W	BUD16	P39988	312 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	TMN3	P40071	706 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	MUP1	P50276	574 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	ESF2	P53743	316 aa	Known RBP	4.54	□□□□□ -1.68
PMS1	YNL082W	SQS1	P53866	767 aa	Known RBP	4.54	□□□□□ -1.68
PMS1	YNL082W	CIR2	Q08822	631 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	TRP4	P07285	380 aa	Predicted RBP	4.54	□□□□□ -1.68
PMS1	YNL082W	RPL19A	P0CX82	189 aa	Known RBP	4.54	□□□□□ -1.68
PMS1	YNL082W	RPL19B	P0CX83	189 aa	Predicted RBP	4.54	□□□□□ -1.68
PMS1	YNL082W	BCD1	P38772	366 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	RMD8	P43620	662 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	CBK1	P53894	756 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	SSL2	Q00578	843 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	TAF11	Q04226	346 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	VAM6	Q07468	1049 aa		4.54	□□□□□ -1.68
PMS1	YNL082W	IRC13	Q08630	104 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms