RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA1	YMR088C	RAP1	P11938	827 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	SPO16	P17122	198 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	SRM1	P21827	482 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	PRD1	P25375	712 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	ICL1	P28240	557 aa	Predicted RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	PRP19	P32523	503 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	ATO2	P32907	282 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	RDH54	P38086	958 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	SRP72	P38688	640 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	YHL050C	P38721	697 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	EMP65	P40085	556 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	CIN5	P40917	295 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	CCT7	P42943	550 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	DUG1	P43616	481 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	SPO74	P45819	413 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	YDL183C	P48569	320 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	HSH155	P49955	971 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	FMS1	P50264	508 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	MNT2	P53059	558 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	YGR054W	P53235	642 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	CWC25	P53854	179 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	FOX2	Q02207	900 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	GSF2	Q04697	403 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	PSR2	Q07949	397 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	SDH5	Q08230	162 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	CUE5	Q08412	411 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	THP3	Q12049	470 aa	Known RBP	5.67	□□□□□ -1.5
VBA1	YMR088C	PIN2	Q12057	282 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	STB3	Q12427	513 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	SEY1	Q99287	776 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	TAF2	P23255	1407 aa		5.67	□□□□□ -1.5
VBA1	YMR088C	ADE3	P07245	946 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	URA4	P20051	364 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	UBA1	P22515	1024 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	RVS161	P25343	265 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	CDC15	P27636	974 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	CRM1	P30822	1084 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	YBL010C	P32788	280 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	RAD5	P32849	1169 aa	Predicted RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	LOS1	P33418	1100 aa	Predicted RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	CBR1	P38626	284 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	LSM12	P38828	187 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	RAD55	P38953	406 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	PIK1	P39104	1066 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	PRM9	P39551	298 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	QDR1	P40475	563 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	SHQ1	P40486	507 aa	Predicted RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	MND2	P40577	368 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	SKP2	P42843	763 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	AAD14	P42884	376 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	LIA1	P47120	325 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	OKP1	P53298	406 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	TFB2	Q02939	513 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	SRL4	Q03085	281 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	COX20	Q04935	205 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	ECM7	Q06200	448 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	DXO1	Q06349	442 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	OMS1	Q06668	471 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	YFT2	Q06676	274 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	YDL114W	Q07530	308 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	YEH2	Q07950	538 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	MED2	Q12124	431 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	TIP41	Q12199	356 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	ARP7	Q12406	477 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	AVL9	Q12500	764 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	YOR019W	Q99248	730 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	PDR10	P51533	1564 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	HIS4	P00815	799 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	FUS3	P16892	353 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	PRP2	P20095	876 aa	Predicted RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	EFT1	P32324	842 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	VMA6	P32366	345 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	ISC10	P32645	267 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	GDH2	P33327	1092 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	DBP7	P36120	742 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	PGM2	P37012	569 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	POL12	P38121	705 aa	Predicted RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	BMT2	P38278	337 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	BSD2	P38356	321 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	BCD1	P38772	366 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	YIL161W	P40449	235 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	UTP25	P40498	721 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	STB2	P46679	850 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	MNN11	P46985	422 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	YKE2	P52553	114 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	SQS1	P53866	767 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	MET14	Q02196	202 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	SWP1	Q02795	286 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	FCP1	Q03254	732 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	CLU1	Q03690	1277 aa	Known RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	ARO10	Q06408	635 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	SIL1	Q08199	421 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	FAP7	Q12055	197 aa	Predicted RBP	5.66	□□□□□ -1.5
VBA1	YMR088C	YDL109C	Q12103	647 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	TAH18	Q12181	623 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	ARP6	Q12509	438 aa		5.66	□□□□□ -1.5
VBA1	YMR088C	CIT1	P00890	479 aa		5.65	□□□□□ -1.51
VBA1	YMR088C	ARG82	P07250	355 aa		5.65	□□□□□ -1.51
VBA1	YMR088C	VAS1	P07806	1104 aa	Known RBP	5.65	□□□□□ -1.51
VBA1	YMR088C	MIS1	P09440	975 aa	Known RBP	5.65	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms