RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C PIP2P52960 996 aa3.74□□□□□ -1.81
UBX4YMR067C GPG1P53130 126 aa3.74□□□□□ -1.81
UBX4YMR067C COQ6P53318 479 aa3.74□□□□□ -1.81
UBX4YMR067C YNL018CP53976 612 aa3.74□□□□□ -1.81
UBX4YMR067C GFD1Q04839 188 aaKnown RBP3.74□□□□□ -1.81
UBX4YMR067C ORM2Q06144 216 aa3.74□□□□□ -1.81
UBX4YMR067C HEM1P09950 548 aaPredicted RBP3.73□□□□□ -1.81
UBX4YMR067C RPS21AP0C0V8 87 aaKnown RBP3.73□□□□□ -1.81
UBX4YMR067C HMG2P12684 1045 aa3.73□□□□□ -1.81
UBX4YMR067C FAT1P38225 669 aa3.73□□□□□ -1.81
UBX4YMR067C LRO1P40345 661 aa3.73□□□□□ -1.81
UBX4YMR067C XBP1P40489 647 aa3.73□□□□□ -1.81
UBX4YMR067C ULP2P40537 1034 aaPredicted RBP3.73□□□□□ -1.81
UBX4YMR067C APD1P38281 316 aa3.72□□□□□ -1.81
UBX4YMR067C OPT1P40897 799 aa3.72□□□□□ -1.81
UBX4YMR067C GPP1P41277 250 aaKnown RBP3.72□□□□□ -1.81
UBX4YMR067C RNR4P49723 345 aaKnown RBP3.72□□□□□ -1.81
UBX4YMR067C YGR237CP50089 785 aa3.72□□□□□ -1.81
UBX4YMR067C USA1Q03714 838 aa3.72□□□□□ -1.81
UBX4YMR067C ARR3Q06598 404 aa3.72□□□□□ -1.81
UBX4YMR067C FAP7Q12055 197 aaPredicted RBP3.72□□□□□ -1.81
UBX4YMR067C DGR2P32330 852 aa3.71□□□□□ -1.82
UBX4YMR067C RPC34P32910 317 aa3.71□□□□□ -1.82
UBX4YMR067C CCL1P37366 393 aa3.71□□□□□ -1.82
UBX4YMR067C BRN1P38170 754 aa3.71□□□□□ -1.82
UBX4YMR067C PSA1P41940 361 aaKnown RBP3.71□□□□□ -1.82
UBX4YMR067C YDL183CP48569 320 aa3.71□□□□□ -1.82
UBX4YMR067C YGL081WP53156 320 aa3.71□□□□□ -1.82
UBX4YMR067C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
UBX4YMR067C VPS33P20795 691 aa3.7□□□□□ -1.82
UBX4YMR067C AEP2P22136 580 aa3.7□□□□□ -1.82
UBX4YMR067C EHT1P38295 451 aa3.7□□□□□ -1.82
UBX4YMR067C YJL193WP39542 402 aa3.7□□□□□ -1.82
UBX4YMR067C GAT1P43574 510 aa3.7□□□□□ -1.82
UBX4YMR067C DUG1P43616 481 aaKnown RBP3.7□□□□□ -1.82
UBX4YMR067C SAP4P53036 818 aa3.7□□□□□ -1.82
UBX4YMR067C PEF1P53238 335 aa3.7□□□□□ -1.82
UBX4YMR067C SQS1P53866 767 aaKnown RBP3.7□□□□□ -1.82
UBX4YMR067C TSR4P25040 408 aa3.69□□□□□ -1.82
UBX4YMR067C GSY2P27472 705 aa3.69□□□□□ -1.82
UBX4YMR067C HXT4P32467 576 aa3.69□□□□□ -1.82
UBX4YMR067C SRP68P38687 599 aaKnown RBP3.69□□□□□ -1.82
UBX4YMR067C ATP23P53722 227 aa3.69□□□□□ -1.82
UBX4YMR067C DOS2P54858 310 aa3.69□□□□□ -1.82
UBX4YMR067C RGT2Q12300 763 aa3.69□□□□□ -1.82
UBX4YMR067C VPS5Q92331 675 aa3.69□□□□□ -1.82
UBX4YMR067C RNR3P21672 869 aaKnown RBP3.68□□□□□ -1.82
UBX4YMR067C BEM3P32873 1128 aa3.68□□□□□ -1.82
UBX4YMR067C STP1Q00947 519 aa3.68□□□□□ -1.82
UBX4YMR067C SKY1Q03656 742 aa3.68□□□□□ -1.82
UBX4YMR067C RMP1Q12530 201 aa3.68□□□□□ -1.82
UBX4YMR067C SEC12P11655 471 aa3.67□□□□□ -1.82
UBX4YMR067C MRPL9P31334 269 aa3.67□□□□□ -1.82
UBX4YMR067C TDA10P42938 290 aa3.67□□□□□ -1.82
UBX4YMR067C SNO3P43544 222 aa3.67□□□□□ -1.82
UBX4YMR067C YFL015CP43578 164 aa3.67□□□□□ -1.82
UBX4YMR067C BPL1P48445 690 aaPredicted RBP3.67□□□□□ -1.82
UBX4YMR067C ERG13P54839 491 aaKnown RBP3.67□□□□□ -1.82
UBX4YMR067C NGL1Q08213 363 aaKnown RBP3.67□□□□□ -1.82
UBX4YMR067C YPR027CQ12079 277 aa3.67□□□□□ -1.82
UBX4YMR067C AAC1P04710 309 aa3.66□□□□□ -1.82
UBX4YMR067C CWH43P25618 953 aa3.66□□□□□ -1.82
UBX4YMR067C YPT10P38146 199 aa3.66□□□□□ -1.82
UBX4YMR067C EXO1P39875 702 aa3.66□□□□□ -1.82
UBX4YMR067C PEA2P40091 420 aa3.66□□□□□ -1.82
UBX4YMR067C GPP2P40106 250 aaKnown RBP3.66□□□□□ -1.82
UBX4YMR067C NMD5P46970 1048 aa3.66□□□□□ -1.82
UBX4YMR067C YJL043WP47053 257 aa3.66□□□□□ -1.82
UBX4YMR067C MPS1P54199 764 aa3.66□□□□□ -1.82
UBX4YMR067C SPN1Q06505 410 aaPredicted RBP3.66□□□□□ -1.82
UBX4YMR067C BSP1Q06604 576 aa3.66□□□□□ -1.82
UBX4YMR067C CRT10Q08226 957 aa3.66□□□□□ -1.82
UBX4YMR067C AQY1P0CD91 305 aa3.65□□□□□ -1.83
UBX4YMR067C DSS4P32601 143 aa3.65□□□□□ -1.83
UBX4YMR067C SER1P33330 395 aaKnown RBP3.65□□□□□ -1.83
UBX4YMR067C RMA1P36001 430 aaKnown RBP3.65□□□□□ -1.83
UBX4YMR067C IRC5P43610 853 aa3.65□□□□□ -1.83
UBX4YMR067C WAR1Q03631 944 aa3.65□□□□□ -1.83
UBX4YMR067C RDL1Q12305 139 aaKnown RBP3.65□□□□□ -1.83
UBX4YMR067C CBP3P21560 335 aa3.64□□□□□ -1.83
UBX4YMR067C BST1P43571 1029 aa3.64□□□□□ -1.83
UBX4YMR067C MTD1Q02046 320 aaKnown RBP3.64□□□□□ -1.83
UBX4YMR067C FRE7Q12333 620 aa3.64□□□□□ -1.83
UBX4YMR067C SEC3P33332 1336 aaKnown RBP3.64□□□□□ -1.83
UBX4YMR067C YEL076C-AP0CX16 216 aa3.63□□□□□ -1.83
UBX4YMR067C YLR464WP0CX17 216 aa3.63□□□□□ -1.83
UBX4YMR067C BET2P20133 325 aa3.63□□□□□ -1.83
UBX4YMR067C ATP12P22135 325 aa3.63□□□□□ -1.83
UBX4YMR067C ECM32P32644 1121 aaKnown RBP3.63□□□□□ -1.83
UBX4YMR067C RRP8P38961 392 aaKnown RBP3.63□□□□□ -1.83
UBX4YMR067C YEL076CP39971 216 aa3.63□□□□□ -1.83
UBX4YMR067C RAD26P40352 1085 aa3.63□□□□□ -1.83
UBX4YMR067C NIT2P47016 307 aa3.63□□□□□ -1.83
UBX4YMR067C MDR1P53258 950 aa3.63□□□□□ -1.83
UBX4YMR067C YPL068CQ02749 293 aa3.63□□□□□ -1.83
UBX4YMR067C PCK1P10963 549 aa3.62□□□□□ -1.83
UBX4YMR067C EUG1P32474 517 aa3.62□□□□□ -1.83
UBX4YMR067C CDC5P32562 705 aa3.62□□□□□ -1.83
UBX4YMR067C SDH8P38345 138 aa3.62□□□□□ -1.83
UBX4YMR067C SPC97P38863 823 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms