RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C RPL4AP10664 362 aaKnown RBP11.41□□□□□ -0.58
SPT8YLR055C CDC24P11433 854 aaPredicted RBP11.41□□□□□ -0.58
SPT8YLR055C EXO70P19658 623 aa11.41□□□□□ -0.58
SPT8YLR055C TYR1P20049 452 aa11.41□□□□□ -0.58
SPT8YLR055C ABD1P32783 436 aaPredicted RBP11.41□□□□□ -0.58
SPT8YLR055C GYP6P32806 458 aa11.41□□□□□ -0.58
SPT8YLR055C SEC6P32844 805 aa11.41□□□□□ -0.58
SPT8YLR055C HES1P35843 434 aa11.41□□□□□ -0.58
SPT8YLR055C TMN3P40071 706 aa11.41□□□□□ -0.58
SPT8YLR055C PRK1P40494 810 aa11.41□□□□□ -0.58
SPT8YLR055C FMP33P46998 180 aa11.41□□□□□ -0.58
SPT8YLR055C RPL4BP49626 362 aaKnown RBP11.41□□□□□ -0.58
SPT8YLR055C DRN1P53255 507 aaKnown RBP11.41□□□□□ -0.58
SPT8YLR055C RPM2Q02773 1202 aa11.41□□□□□ -0.58
SPT8YLR055C MSH6Q03834 1242 aa11.41□□□□□ -0.58
SPT8YLR055C BI2P03873 423 aa11.4□□□□□ -0.58
SPT8YLR055C BI4P03879 638 aa11.4□□□□□ -0.58
SPT8YLR055C AST1P35183 429 aa11.4□□□□□ -0.58
SPT8YLR055C APM2P38700 605 aa11.4□□□□□ -0.58
SPT8YLR055C MSR1P38714 643 aa11.4□□□□□ -0.58
SPT8YLR055C YHL026CP38740 315 aa11.4□□□□□ -0.58
SPT8YLR055C DYS1P38791 387 aa11.4□□□□□ -0.58
SPT8YLR055C YAP1801P38856 637 aa11.4□□□□□ -0.58
SPT8YLR055C SAE2P46946 345 aa11.4□□□□□ -0.58
SPT8YLR055C PAN2P53010 1115 aaPredicted RBP11.4□□□□□ -0.58
SPT8YLR055C YGR035CP53222 116 aa11.4□□□□□ -0.58
SPT8YLR055C BIO4P53630 237 aa11.4□□□□□ -0.58
SPT8YLR055C HMO1Q03973 246 aaKnown RBP11.4□□□□□ -0.58
SPT8YLR055C ARO80Q04052 950 aa11.4□□□□□ -0.58
SPT8YLR055C FAP7Q12055 197 aaPredicted RBP11.4□□□□□ -0.58
SPT8YLR055C BI3Q9ZZW7 517 aa11.4□□□□□ -0.58
SPT8YLR055C HIP1P06775 603 aa11.39□□□□□ -0.59
SPT8YLR055C PRR1P28708 518 aa11.39□□□□□ -0.59
SPT8YLR055C POA1P38218 177 aa11.39□□□□□ -0.59
SPT8YLR055C MIG2P53035 382 aa11.39□□□□□ -0.59
SPT8YLR055C CWC21Q03375 135 aaKnown RBP11.39□□□□□ -0.59
SPT8YLR055C IWR1Q07532 353 aaPredicted RBP11.39□□□□□ -0.59
SPT8YLR055C SLP1Q12232 587 aa11.39□□□□□ -0.59
SPT8YLR055C SPE4Q12455 300 aa11.39□□□□□ -0.59
SPT8YLR055C YAK1P14680 807 aa11.39□□□□□ -0.59
SPT8YLR055C SNT1P25357 1226 aa11.39□□□□□ -0.59
SPT8YLR055C RPT1P33299 467 aaKnown RBP11.39□□□□□ -0.59
SPT8YLR055C NUP120P35729 1037 aa11.39□□□□□ -0.59
SPT8YLR055C ETR1P38071 380 aa11.39□□□□□ -0.59
SPT8YLR055C LAM1P38851 1228 aa11.39□□□□□ -0.59
SPT8YLR055C DPH1P40487 425 aaKnown RBP11.39□□□□□ -0.59
SPT8YLR055C LSC1P53598 329 aaKnown RBP11.39□□□□□ -0.59
SPT8YLR055C IST1P53843 298 aaPredicted RBP11.39□□□□□ -0.59
SPT8YLR055C ALG11P53954 548 aaKnown RBP11.39□□□□□ -0.59
SPT8YLR055C ADI1Q03677 179 aa11.39□□□□□ -0.59
SPT8YLR055C ADE13Q05911 482 aaKnown RBP11.39□□□□□ -0.59
SPT8YLR055C CDC42P19073 191 aa11.38□□□□□ -0.59
SPT8YLR055C RRT12P25381 491 aa11.38□□□□□ -0.59
SPT8YLR055C CSE2P33308 149 aa11.38□□□□□ -0.59
SPT8YLR055C TRM5P38793 499 aa11.38□□□□□ -0.59
SPT8YLR055C FTR1P40088 404 aa11.38□□□□□ -0.59
SPT8YLR055C GCN20P43535 752 aaKnown RBP11.38□□□□□ -0.59
SPT8YLR055C ISM1P48526 1002 aa11.38□□□□□ -0.59
SPT8YLR055C YOR059CQ08448 450 aaKnown RBP11.38□□□□□ -0.59
SPT8YLR055C AI5_BETAQ9ZZX0 354 aa11.38□□□□□ -0.59
SPT8YLR055C NAT1P12945 854 aaKnown RBP11.37□□□□□ -0.59
SPT8YLR055C SLA2P33338 968 aa11.37□□□□□ -0.59
SPT8YLR055C ESL1P40456 1118 aa11.37□□□□□ -0.59
SPT8YLR055C YJL107CP42947 387 aa11.37□□□□□ -0.59
SPT8YLR055C ULI1P43604 169 aa11.37□□□□□ -0.59
SPT8YLR055C YGR016WP53209 190 aa11.37□□□□□ -0.59
SPT8YLR055C BUD22Q04347 519 aaKnown RBP11.37□□□□□ -0.59
SPT8YLR055C YET3Q07451 203 aa11.37□□□□□ -0.59
SPT8YLR055C YOR022CQ12204 715 aa11.37□□□□□ -0.59
SPT8YLR055C ASP3-2P0CX77 362 aa11.37□□□□□ -0.59
SPT8YLR055C ASP3-3P0CX78 362 aa11.37□□□□□ -0.59
SPT8YLR055C ASP3-4P0CX79 362 aa11.37□□□□□ -0.59
SPT8YLR055C ASP3-1P0CZ17 362 aa11.37□□□□□ -0.59
SPT8YLR055C PDR1P12383 1068 aa11.37□□□□□ -0.59
SPT8YLR055C URA7P28274 579 aaKnown RBP11.37□□□□□ -0.59
SPT8YLR055C VPH2P32341 215 aa11.37□□□□□ -0.59
SPT8YLR055C CUE2P36075 443 aaKnown RBP11.37□□□□□ -0.59
SPT8YLR055C CBR1P38626 284 aaKnown RBP11.37□□□□□ -0.59
SPT8YLR055C YER186CP40101 306 aa11.37□□□□□ -0.59
SPT8YLR055C PDS1P40316 373 aaPredicted RBP11.37□□□□□ -0.59
SPT8YLR055C SBE2P42223 864 aaKnown RBP11.37□□□□□ -0.59
SPT8YLR055C HLJ1P48353 224 aa11.37□□□□□ -0.59
SPT8YLR055C YDR476CQ03362 224 aa11.37□□□□□ -0.59
SPT8YLR055C DIA2Q08496 732 aaPredicted RBP11.37□□□□□ -0.59
SPT8YLR055C TAF3Q12297 353 aa11.37□□□□□ -0.59
SPT8YLR055C GPM3Q12326 303 aa11.37□□□□□ -0.59
SPT8YLR055C TIF1P10081 395 aaKnown RBP11.36□□□□□ -0.59
SPT8YLR055C URA4P20051 364 aa11.36□□□□□ -0.59
SPT8YLR055C RSA4P25382 515 aaKnown RBP11.36□□□□□ -0.59
SPT8YLR055C DGR2P32330 852 aa11.36□□□□□ -0.59
SPT8YLR055C YSC84P32793 468 aa11.36□□□□□ -0.59
SPT8YLR055C YKR078WP36158 585 aaKnown RBP11.36□□□□□ -0.59
SPT8YLR055C KHA1P40309 873 aa11.36□□□□□ -0.59
SPT8YLR055C ARG2P40360 574 aa11.36□□□□□ -0.59
SPT8YLR055C YJL045WP47052 634 aa11.36□□□□□ -0.59
SPT8YLR055C SKY1Q03656 742 aa11.36□□□□□ -0.59
SPT8YLR055C INP2Q03824 705 aa11.36□□□□□ -0.59
SPT8YLR055C ADY3Q07732 790 aa11.36□□□□□ -0.59
SPT8YLR055C SGT2Q12118 346 aaKnown RBP11.36□□□□□ -0.59
SPT8YLR055C NOT5Q12514 560 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms