RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	IZH3	Q07959	543 aa		2.56	□□□□□ -2
DOT6	YER088C	TRE2	Q08693	809 aa		2.56	□□□□□ -2
DOT6	YER088C	CLF1	Q12309	687 aa	Predicted RBP	2.56	□□□□□ -2
DOT6	YER088C	USO1	P25386	1790 aa		2.55	□□□□□ -2
DOT6	YER088C	VPS73	P53142	486 aa	Known RBP	2.55	□□□□□ -2
DOT6	YER088C	YGR151C	P53287	111 aa		2.55	□□□□□ -2
DOT6	YER088C	NGL1	Q08213	363 aa	Known RBP	2.55	□□□□□ -2
DOT6	YER088C	YPR027C	Q12079	277 aa		2.55	□□□□□ -2
DOT6	YER088C	TY3B-G	Q99315	1547 aa		2.55	□□□□□ -2
DOT6	YER088C	TUP1	P16649	713 aa		2.54	□□□□□ -2
DOT6	YER088C	PRP22	P24384	1145 aa	Known RBP	2.54	□□□□□ -2
DOT6	YER088C	FUB1	P25659	250 aa		2.54	□□□□□ -2
DOT6	YER088C	CBR1	P38626	284 aa	Known RBP	2.54	□□□□□ -2
DOT6	YER088C	DUN1	P39009	513 aa		2.54	□□□□□ -2
DOT6	YER088C	BDH2	P39713	417 aa		2.54	□□□□□ -2
DOT6	YER088C	ARG2	P40360	574 aa		2.54	□□□□□ -2
DOT6	YER088C	SPO1	P53541	631 aa		2.54	□□□□□ -2
DOT6	YER088C	TIM50	Q02776	476 aa		2.54	□□□□□ -2
DOT6	YER088C	FDC1	Q03034	503 aa		2.54	□□□□□ -2
DOT6	YER088C	HLR1	Q04429	423 aa		2.54	□□□□□ -2
DOT6	YER088C	NUP157	P40064	1391 aa	Known RBP	2.54	□□□□□ -2
DOT6	YER088C	RPS9B	P05755	195 aa	Known RBP	2.54	□□□□□ -2
DOT6	YER088C	COX11	P19516	300 aa	Known RBP	2.54	□□□□□ -2
DOT6	YER088C	SRP68	P38687	599 aa	Known RBP	2.54	□□□□□ -2
DOT6	YER088C	KSP1	P38691	1029 aa	Known RBP	2.54	□□□□□ -2
DOT6	YER088C	YJL206C	P39529	758 aa		2.54	□□□□□ -2
DOT6	YER088C	MIT1	P40002	666 aa		2.54	□□□□□ -2
DOT6	YER088C	TAH11	P47112	604 aa		2.54	□□□□□ -2
DOT6	YER088C	CTR1	P49573	406 aa		2.54	□□□□□ -2
DOT6	YER088C	RNR4	P49723	345 aa	Known RBP	2.54	□□□□□ -2
DOT6	YER088C	UBA2	P52488	636 aa		2.54	□□□□□ -2
DOT6	YER088C	PPN1	Q04119	674 aa		2.54	□□□□□ -2
DOT6	YER088C	ECM38	Q05902	660 aa	Predicted RBP	2.54	□□□□□ -2
DOT6	YER088C	ARR3	Q06598	404 aa		2.54	□□□□□ -2
DOT6	YER088C	TFC4	P33339	1025 aa		2.53	□□□□□ -2
DOT6	YER088C	RMA1	P36001	430 aa	Known RBP	2.53	□□□□□ -2
DOT6	YER088C	GLG1	P36143	616 aa		2.53	□□□□□ -2
DOT6	YER088C	PEX14	P53112	341 aa		2.53	□□□□□ -2
DOT6	YER088C	PEF1	P53238	335 aa		2.53	□□□□□ -2
DOT6	YER088C	YDL086W	Q07505	273 aa		2.53	□□□□□ -2
DOT6	YER088C	BMS1	Q08965	1183 aa	Known RBP	2.53	□□□□□ -2
DOT6	YER088C	SLX4	Q12098	748 aa		2.53	□□□□□ -2
DOT6	YER088C	TY1B-NL2	Q99337	1749 aa	Known RBP	2.53	□□□□□ -2
DOT6	YER088C	HMG2	P12684	1045 aa		2.52	□□□□□ -2.01
DOT6	YER088C	KIN3	P22209	435 aa		2.52	□□□□□ -2.01
DOT6	YER088C	MRPL7	P36519	292 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YMC2	P38087	329 aa		2.52	□□□□□ -2.01
DOT6	YER088C	EHT1	P38295	451 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YAP3	P38749	330 aa		2.52	□□□□□ -2.01
DOT6	YER088C	EAF5	P39995	279 aa		2.52	□□□□□ -2.01
DOT6	YER088C	TMN3	P40071	706 aa		2.52	□□□□□ -2.01
DOT6	YER088C	ENP2	P48234	707 aa	Known RBP	2.52	□□□□□ -2.01
DOT6	YER088C	MNT2	P53059	558 aa		2.52	□□□□□ -2.01
DOT6	YER088C	PEX8	P53248	589 aa		2.52	□□□□□ -2.01
DOT6	YER088C	MTD1	Q02046	320 aa	Known RBP	2.52	□□□□□ -2.01
DOT6	YER088C	YSH1	Q06224	779 aa	Predicted RBP	2.52	□□□□□ -2.01
DOT6	YER088C	YOR378W	Q08902	515 aa		2.52	□□□□□ -2.01
DOT6	YER088C	RKI1	Q12189	258 aa		2.52	□□□□□ -2.01
DOT6	YER088C	TAD3	Q9URQ3	322 aa		2.52	□□□□□ -2.01
DOT6	YER088C	HAP1	P0CE41	1502 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YEL076C-A	P0CX16	216 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YLR464W	P0CX17	216 aa		2.52	□□□□□ -2.01
DOT6	YER088C	STE4	P18851	423 aa		2.52	□□□□□ -2.01
DOT6	YER088C	NTH1	P32356	751 aa		2.52	□□□□□ -2.01
DOT6	YER088C	ELF1	P36053	145 aa		2.52	□□□□□ -2.01
DOT6	YER088C	GMH1	P36125	273 aa		2.52	□□□□□ -2.01
DOT6	YER088C	TDP1	P38319	544 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YHR033W	P38690	423 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YEL076C	P39971	216 aa		2.52	□□□□□ -2.01
DOT6	YER088C	MAD2	P40958	196 aa		2.52	□□□□□ -2.01
DOT6	YER088C	SLD3	P53135	668 aa		2.52	□□□□□ -2.01
DOT6	YER088C	SPC105	P53148	917 aa		2.52	□□□□□ -2.01
DOT6	YER088C	NMA2	P53204	395 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YGR054W	P53235	642 aa	Known RBP	2.52	□□□□□ -2.01
DOT6	YER088C	DIP5	P53388	608 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YNL034W	P53963	612 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YNL018C	P53976	612 aa		2.52	□□□□□ -2.01
DOT6	YER088C	MAK10	Q02197	733 aa		2.52	□□□□□ -2.01
DOT6	YER088C	YCG1	Q06680	1035 aa		2.52	□□□□□ -2.01
DOT6	YER088C	PEX15	Q08215	383 aa		2.52	□□□□□ -2.01
DOT6	YER088C	DIN7	Q12086	430 aa		2.52	□□□□□ -2.01
DOT6	YER088C	RTK1	Q12100	620 aa	Predicted RBP	2.52	□□□□□ -2.01
DOT6	YER088C	BNR1	P40450	1375 aa		2.52	□□□□□ -2.01
DOT6	YER088C	LAM4	P38800	1345 aa		2.51	□□□□□ -2.01
DOT6	YER088C	PHO5	P00635	467 aa		2.51	□□□□□ -2.01
DOT6	YER088C	ABF1	P14164	731 aa		2.51	□□□□□ -2.01
DOT6	YER088C	SEC15	P22224	910 aa		2.51	□□□□□ -2.01
DOT6	YER088C	DGR2	P32330	852 aa		2.51	□□□□□ -2.01
DOT6	YER088C	TOM20	P35180	183 aa		2.51	□□□□□ -2.01
DOT6	YER088C	LRO1	P40345	661 aa		2.51	□□□□□ -2.01
DOT6	YER088C	PUS4	P48567	403 aa	Known RBP	2.51	□□□□□ -2.01
DOT6	YER088C	RPS15	Q01855	142 aa	Known RBP	2.51	□□□□□ -2.01
DOT6	YER088C	CWC2	Q12046	339 aa	Predicted RBP	2.51	□□□□□ -2.01
DOT6	YER088C	LEU2	P04173	364 aa	Predicted RBP	2.51	□□□□□ -2.01
DOT6	YER088C	HOP1	P20050	605 aa		2.51	□□□□□ -2.01
DOT6	YER088C	FLO10	P36170	1169 aa		2.51	□□□□□ -2.01
DOT6	YER088C	EMP65	P40085	556 aa		2.51	□□□□□ -2.01
DOT6	YER088C	PEA2	P40091	420 aa		2.51	□□□□□ -2.01
DOT6	YER088C	EFR3	Q03653	782 aa	Known RBP	2.51	□□□□□ -2.01
DOT6	YER088C	USA1	Q03714	838 aa		2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 145.2 ms