RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	MATALPHA2	P0CY08	210 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	HMLALPHA2	P0CY09	210 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	CDC24	P11433	854 aa	Predicted RBP	5.36	□□□□□ -1.55
DBF4	YDR052C	PGI1	P12709	554 aa	Known RBP	5.36	□□□□□ -1.55
DBF4	YDR052C	RAD4	P14736	754 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	POL3	P15436	1097 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	SPB1	P25582	841 aa	Predicted RBP	5.36	□□□□□ -1.55
DBF4	YDR052C	POL4	P25615	582 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	CWH43	P25618	953 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	ZIP1	P31111	875 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	LRG1	P35688	1017 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	MIP6	P38760	659 aa	Known RBP	5.36	□□□□□ -1.55
DBF4	YDR052C	HGH1	P48362	394 aa	Known RBP	5.36	□□□□□ -1.55
DBF4	YDR052C	DIE2	P50076	525 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	YGR237C	P50089	785 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	YKE2	P52553	114 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	ALD6	P54115	500 aa	Known RBP	5.36	□□□□□ -1.55
DBF4	YDR052C	SDH1	Q00711	640 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	DAS2	Q12084	232 aa		5.36	□□□□□ -1.55
DBF4	YDR052C	CCP1	P00431	361 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	URA3	P03962	267 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	SIR3	P06701	978 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	YGL041W-A	P0C5N3	154 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	HMG2	P12684	1045 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	ATR1	P13090	542 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	MEF1	P25039	761 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	MRM1	P25270	412 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	HXT1	P32465	570 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	FBP26	P32604	452 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	SRP101	P32916	621 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	STB6	P36085	766 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	YBR032W	P38223	100 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	DIA4	P38705	446 aa	Predicted RBP	5.35	□□□□□ -1.55
DBF4	YDR052C	PMC1	P38929	1173 aa	Predicted RBP	5.35	□□□□□ -1.55
DBF4	YDR052C	VFA1	P40080	203 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	DPH1	P40487	425 aa	Known RBP	5.35	□□□□□ -1.55
DBF4	YDR052C	YAP5	P40574	245 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	RTS2	P40962	232 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	ELP2	P42935	788 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	OKP1	P53298	406 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	MPS1	P54199	764 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	MDM1	Q01846	1127 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	RAD30	Q04049	632 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	RSC58	Q07979	502 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	VHS3	Q08438	674 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	TCB1	Q12466	1186 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	BCK1	Q01389	1478 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	CHO2	P05374	869 aa	Known RBP	5.35	□□□□□ -1.55
DBF4	YDR052C	HXT2	P23585	541 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	HBS1	P32769	611 aa	Known RBP	5.35	□□□□□ -1.55
DBF4	YDR052C	MET1	P36150	593 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	YBR138C	P38277	524 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	YHR219W	P38900	624 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	GID8	P40208	455 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	ATG32	P40458	529 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	IES1	P43579	692 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	BNA6	P43619	295 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	MSE1	P48525	536 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	CPR6	P53691	371 aa	Known RBP	5.35	□□□□□ -1.55
DBF4	YDR052C	MRPL50	P53724	139 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	ASI2	P53895	289 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	SED5	Q01590	340 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	HRK1	Q08732	759 aa	Known RBP	5.35	□□□□□ -1.55
DBF4	YDR052C	RAX1	Q08760	435 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	RCN2	Q12044	265 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	FMP16	Q12497	93 aa		5.35	□□□□□ -1.55
DBF4	YDR052C	DBP5	P20449	482 aa	Known RBP	5.34	□□□□□ -1.55
DBF4	YDR052C	KIP2	P28743	706 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	PEX3	P28795	441 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	MCD4	P36051	919 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	NTR2	P36118	322 aa	Predicted RBP	5.34	□□□□□ -1.55
DBF4	YDR052C	TYS1	P36421	394 aa	Known RBP	5.34	□□□□□ -1.55
DBF4	YDR052C	YBR139W	P38109	508 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	CCT3	P39077	534 aa	Known RBP	5.34	□□□□□ -1.55
DBF4	YDR052C	DSE1	P40077	573 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	QRI1	P43123	477 aa	Known RBP	5.34	□□□□□ -1.55
DBF4	YDR052C	EPL1	P43572	832 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	NMD5	P46970	1048 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	VMA10	P48836	114 aa	Known RBP	5.34	□□□□□ -1.55
DBF4	YDR052C	CGR1	P53188	120 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	PIB2	P53191	635 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	LSC2	P53312	427 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	YPL034W	Q03083	165 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	EBS1	Q03466	884 aa	Known RBP	5.34	□□□□□ -1.55
DBF4	YDR052C	DLT1	Q04216	342 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	SPO20	Q04359	397 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	URC2	Q04411	772 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	PUS7	Q08647	676 aa	Known RBP	5.34	□□□□□ -1.55
DBF4	YDR052C	MED2	Q12124	431 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	DPH6	Q12429	685 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	YPT6	Q99260	215 aa		5.34	□□□□□ -1.55
DBF4	YDR052C	GPM1	P00950	247 aa	Known RBP	5.33	□□□□□ -1.56
DBF4	YDR052C	TUB1	P09733	447 aa	Known RBP	5.33	□□□□□ -1.56
DBF4	YDR052C	STE12	P13574	688 aa		5.33	□□□□□ -1.56
DBF4	YDR052C	RAD27	P26793	382 aa		5.33	□□□□□ -1.56
DBF4	YDR052C	CMK1	P27466	446 aa	Known RBP	5.33	□□□□□ -1.56
DBF4	YDR052C	SBA1	P28707	216 aa	Known RBP	5.33	□□□□□ -1.56
DBF4	YDR052C	IMP3	P32899	183 aa	Predicted RBP	5.33	□□□□□ -1.56
DBF4	YDR052C	CPR5	P35176	225 aa		5.33	□□□□□ -1.56
DBF4	YDR052C	MAE1	P36013	669 aa	Known RBP	5.33	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms