RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 FAM209AQ5JX71 171 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 THSD4Q6ZMP0 1018 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 KRT25Q7Z3Z0 450 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 REC114Q7Z4M0 266 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 NLRP13Q86W25 1043 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 SYNPOQ8N3V7 929 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 ZBTB38Q8NAP3 1195 aaPredicted RBP3.35□□□□□ -1.87
HMHB1-202ENST00000638299 RBBP8NLQ8NC74 664 aaPredicted RBP3.35□□□□□ -1.87
HMHB1-202ENST00000638299 ST13P5Q8NFI4 369 aaPredicted RBP3.35□□□□□ -1.87
HMHB1-202ENST00000638299 OR6P1Q8NGX9 317 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 GRIN3AQ8TCU5 1115 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 STK35Q8TDR2 534 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 HOOK2Q96ED9 719 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 ZIC5Q96T25 663 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 ZKSCAN3Q9BRR0 538 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 YIPF4Q9BSR8 244 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 GRIP2Q9C0E4 1043 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 PTPRHQ9HD43 1115 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 OSGEPQ9NPF4 335 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 PCDHB10Q9UN67 800 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 POLR3KQ9Y2Y1 108 aaPredicted RBP3.35□□□□□ -1.87
HMHB1-202ENST00000638299 PCDHB14Q9Y5E9 798 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 PHLDB1Q86UU1 1377 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 ROBO2Q9HCK4 1378 aa3.35□□□□□ -1.87
HMHB1-202ENST00000638299 POTEMA6NI47 508 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 RNF223E7ERA6 249 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 RGS20O76081 388 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 FOSP01100 380 aaPredicted RBP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 ATP4AP20648 1035 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 BMP6P22004 513 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 BDNFP23560 247 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 TARSP26639 723 aaKnown RBP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 CCNFP41002 786 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 CDK8P49336 464 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 NEK3P51956 506 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 TYRO3Q06418 890 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 ITKQ08881 620 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 LMOD3Q0VAK6 560 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 STRN3Q13033 797 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 PCBP1Q15365 356 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 VPS72Q15906 364 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 CWF19L2Q2TBE0 894 aaKnown RBP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 YOD1Q5VVQ6 348 aaPredicted RBP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 IL31Q6EBC2 164 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 MPRIPQ6WCQ1 1025 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 BICDL1Q6ZP65 573 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 CCNJLQ8IV13 435 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 LEO1Q8WVC0 666 aaPredicted RBP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 KISS1RQ969F8 398 aaPredicted RBP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 PMEPA1Q969W9 287 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 TIFAQ96CG3 184 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 ITPKCQ96DU7 683 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 MTMR8Q96EF0 704 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 SCYL1Q96KG9 808 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 OSMRQ99650 979 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 ZCCHC2Q9C0B9 1178 aaKnown RBP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 CDH19Q9H159 772 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 NCOA5Q9HCD5 579 aaKnown RBP3.34□□□□□ -1.87
HMHB1-202ENST00000638299 AASDHPPTQ9NRN7 309 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 LRRC4BQ9NT99 713 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 TAGLN3Q9UI15 199 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 LTBP3Q9NS15 1303 aa3.34□□□□□ -1.87
HMHB1-202ENST00000638299 FAM86C2PA6NEL3 165 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 NRDCO43847 1150 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 ST18O60284 1047 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 MMP20O60882 483 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 RFPL3O75679 317 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 EGFRP00533 1210 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 EDN3P14138 238 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 RPS26P62854 115 aaKnown RBP3.33□□□□□ -1.88
HMHB1-202ENST00000638299 POU4F2Q12837 409 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 TCIRG1Q13488 830 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 PIN1Q13526 163 aaPredicted RBP3.33□□□□□ -1.88
HMHB1-202ENST00000638299 HIF1AQ16665 826 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 SLC10A6Q3KNW5 377 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 GNASQ5JWF2 1037 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 SLC27A3Q5K4L6 730 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 HGSNATQ68CP4 663 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 NBPF10Q6P3W6 841 aaKnown RBP3.33□□□□□ -1.88
HMHB1-202ENST00000638299 Q6ZVU0 165 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 LRRTM3Q86VH5 581 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 NLRP8Q86W28 1048 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 TCEAL8Q8IYN2 117 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 REXO1Q8N1G1 1221 aaKnown RBP3.33□□□□□ -1.88
HMHB1-202ENST00000638299 MPNDQ8N594 471 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 RIN3Q8TB24 985 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 COG1Q8WTW3 980 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 TRIM52Q96A61 297 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 E2F7Q96AV8 911 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 KCTD12Q96CX2 325 aaKnown RBP3.33□□□□□ -1.88
HMHB1-202ENST00000638299 CEP63Q96MT8 703 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 HS3ST6Q96QI5 342 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 GSX2Q9BZM3 304 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 CEP44Q9C0F1 390 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 TMX4Q9H1E5 349 aaPredicted RBP3.33□□□□□ -1.88
HMHB1-202ENST00000638299 MIR1-1HGQ9H1L0 117 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 ZFAND3Q9H8U3 227 aa3.33□□□□□ -1.88
HMHB1-202ENST00000638299 EHMT1Q9H9B1 1298 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms