RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 POMGNT1Q8WZA1 660 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 RRP36Q96EU6 259 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 TMX3Q96JJ7 454 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 MAFGO15525 162 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 ITIH3Q06033 890 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 PICK1Q9NRD5 415 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 CCDC14Q49A88 953 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 PLB1Q6P1J6 1458 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 IFI16Q16666 785 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 KRT24Q2M2I5 525 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 PAG1Q9NWQ8 432 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 HP1BP3Q5SSJ5 553 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 CPLX4Q7Z7G2 160 aa19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 GOLGA1Q92805 767 aa19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 CCDC129Q6ZRS4 1044 aa19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 DNAJC25Q9H1X3 360 aa19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 LRMPQ12912 555 aa19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 MCMDC2Q4G0Z9 681 aa19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 RTCBQ9Y3I0 505 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 CCDC141Q6ZP82 1450 aa19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 HSPA2P54652 639 aa19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 DNM1Q05193 864 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 MRPL46Q9H2W6 279 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 NCKAP5LQ9HCH0 1330 aa19.06■□□□□ 0.64
CACNA1A-253ENST00000637927 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 TBC1D10BQ4KMP7 808 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 ZC3H12CQ9C0D7 883 aaKnown RBP19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 TNNQ9UQP3 1299 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 ARHGEF2Q92974 986 aaKnown RBP19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 KIF3CO14782 793 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 GIPC1O14908 333 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 INF2Q27J81 1249 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 SDCCAG8Q86SQ7 713 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 WDR48Q8TAF3 677 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 ZNF653Q96CK0 615 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 CTNND2Q9UQB3 1225 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 KRT2P35908 639 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 GPR162Q16538 588 aa19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 TTC31Q49AM3 519 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 RYBPQ8N488 228 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-253ENST00000637927 GNPATO15228 680 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 CCDC172P0C7W6 258 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 ZNF710Q8N1W2 664 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 C8orf58Q8NAV2 365 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 IRS4O14654 1257 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 ZSCAN22P10073 491 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 CCDC121Q6ZUS5 278 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 MYO1AQ9UBC5 1043 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 TRPC3Q13507 836 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 RDH13Q8NBN7 331 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 RMND1Q9NWS8 449 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 APOL6Q9BWW8 343 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 GRM8O00222 908 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 FBXW4P57775 412 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 TMOD4Q9NZQ9 345 aa19.04■□□□□ 0.64
CACNA1A-253ENST00000637927 KANK3Q6NY19 840 aa19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 MORC4Q8TE76 937 aa19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 ANKS4BQ8N8V4 417 aa19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 ATP2A1O14983 1001 aa19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 PRR16Q569H4 304 aa19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 PRDM5Q9NQX1 630 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 RBM28Q9NW13 759 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 NBPF7P0C2Y1 421 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 UBE2HP62256 183 aa19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 EFCAB5A4FU69 1503 aa19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 BICDL2A1A5D9 508 aa19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 ZNF569Q5MCW4 686 aa19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 ZGPATQ8N5A5 531 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-253ENST00000637927 CIB2O75838 187 aa19.02■□□□□ 0.64
CACNA1A-253ENST00000637927 ZNF174Q15697 407 aa19.02■□□□□ 0.64
CACNA1A-253ENST00000637927 CCNT1O60563 726 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-253ENST00000637927 NEK11Q8NG66 645 aa19.02■□□□□ 0.64
CACNA1A-253ENST00000637927 CXorf38Q8TB03 319 aa19.02■□□□□ 0.64
CACNA1A-253ENST00000637927 PPIP5K1Q6PFW1 1433 aa19.02■□□□□ 0.64
CACNA1A-253ENST00000637927 GSDMDP57764 484 aa19.02■□□□□ 0.64
CACNA1A-253ENST00000637927 ACBD5Q5T8D3 534 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-253ENST00000637927 TTC21BQ7Z4L5 1316 aa19.02■□□□□ 0.64
CACNA1A-253ENST00000637927 STMN2Q93045 179 aa19.02■□□□□ 0.63
CACNA1A-253ENST00000637927 BICC1Q9H694 974 aaKnown RBP19.02■□□□□ 0.63
CACNA1A-253ENST00000637927 KIF2AO00139 706 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 ALKBH8Q96BT7 664 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 PPP1R16BQ96T49 567 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 PLVAPQ9BX97 442 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 OATP04181 439 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 IGBP1P78318 339 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 ESYT2A0FGR8 921 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 LETM2Q2VYF4 491 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 ANLNQ9NQW6 1124 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 SPOPO43791 374 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 LDHBP07195 334 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 WDR44Q5JSH3 913 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 LRRC27Q9C0I9 530 aa19.01■□□□□ 0.63
CACNA1A-253ENST00000637927 BNIP3LO60238 219 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 SCYL2Q6P3W7 929 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 NUF2Q9BZD4 464 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 SMIM24O75264 130 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 CPA1P15085 419 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms