RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 CTDSPL2Q05D32 466 aa21.57■■□□□ 1.04
CTSD-212ENST00000637815 SASS6Q6UVJ0 657 aa21.57■■□□□ 1.04
CTSD-212ENST00000637815 CCDC73Q6ZRK6 1079 aa21.57■■□□□ 1.04
CTSD-212ENST00000637815 STAG1Q8WVM7 1258 aa21.57■■□□□ 1.04
CTSD-212ENST00000637815 NAP1L5Q96NT1 182 aaPredicted RBP21.57■■□□□ 1.04
CTSD-212ENST00000637815 KRT23Q9C075 422 aa21.57■■□□□ 1.04
CTSD-212ENST00000637815 BCL2L12Q9HB09 334 aa21.57■■□□□ 1.04
CTSD-212ENST00000637815 SENP2Q9HC62 589 aa21.57■■□□□ 1.04
CTSD-212ENST00000637815 ZSWIM5Q9P217 1185 aa21.57■■□□□ 1.04
CTSD-212ENST00000637815 COL1A1P02452 1464 aaPredicted RBP21.57■■□□□ 1.04
CTSD-212ENST00000637815 ZBTB43O43298 467 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 PRKAB2O43741 272 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 YEATS4O95619 227 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 CAVIN2O95810 425 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 ME1P48163 572 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 KIF23Q02241 960 aaPredicted RBP21.56■■□□□ 1.04
CTSD-212ENST00000637815 FAM160A1Q05DH4 1040 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 TMEM67Q5HYA8 995 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.56■■□□□ 1.04
CTSD-212ENST00000637815 LINC00301Q8NCQ3 95 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 CBX8Q9HC52 389 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 SLC4A4Q9Y6R1 1079 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 CDC27P30260 824 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 MYSM1Q5VVJ2 828 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 TBC1D9BQ66K14 1250 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 CPLX2Q6PUV4 134 aaKnown RBP21.56■■□□□ 1.04
CTSD-212ENST00000637815 NGLY1Q96IV0 654 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 C8orf37Q96NL8 207 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 INCENPQ9NQS7 918 aa21.56■■□□□ 1.04
CTSD-212ENST00000637815 GNL3LQ9NVN8 582 aaKnown RBP21.56■■□□□ 1.04
CTSD-212ENST00000637815 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.56■■□□□ 1.04
CTSD-212ENST00000637815 A0A1W2PQ27 194 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 A0A1W2PQ64 194 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 A0A1W2PQD8 194 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 NTRK3Q16288 839 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 ADALQ6DHV7 355 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 MFSD6Q6ZSS7 791 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 NARFQ9UHQ1 456 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 PCDHA7Q9UN72 937 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 LY75O60449 1722 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 TDO2P48775 406 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 KCNQ4P56696 695 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 LUZP1Q86V48 1076 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 MICU3Q86XE3 530 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 FNBP4Q8N3X1 1017 aaPredicted RBP21.55■■□□□ 1.04
CTSD-212ENST00000637815 KCNG4Q8TDN1 519 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 MTA3Q9BTC8 594 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 GJB4Q9NTQ9 266 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 MINPP1Q9UNW1 487 aa21.55■■□□□ 1.04
CTSD-212ENST00000637815 KIF28PB7ZC32 967 aa21.54■■□□□ 1.04
CTSD-212ENST00000637815 RPS6KA4O75676 772 aa21.54■■□□□ 1.04
CTSD-212ENST00000637815 FSIP1Q8NA03 581 aa21.54■■□□□ 1.04
CTSD-212ENST00000637815 NYXQ9GZU5 481 aa21.54■■□□□ 1.04
CTSD-212ENST00000637815 FAM217BQ9NTX9 383 aaPredicted RBP21.54■■□□□ 1.04
CTSD-212ENST00000637815 BAZ2AQ9UIF9 1905 aaKnown RBP21.54■■□□□ 1.04
CTSD-212ENST00000637815 IFIT3O14879 490 aaKnown RBP21.53■■□□□ 1.04
CTSD-212ENST00000637815 POLR3DP05423 398 aaPredicted RBP21.53■■□□□ 1.04
CTSD-212ENST00000637815 RXRAP19793 462 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 CYP7A1P22680 504 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 GYG1P46976 350 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 NFXL1Q6ZNB6 911 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 PTF1AQ7RTS3 328 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 TDRD7Q8NHU6 1098 aaKnown RBP21.53■■□□□ 1.04
CTSD-212ENST00000637815 MRPS27Q92552 414 aaKnown RBP21.53■■□□□ 1.04
CTSD-212ENST00000637815 ALG1Q9BT22 464 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 CLIC4Q9Y696 253 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 GOLGA8AA7E2F4 631 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 KINO60870 393 aaKnown RBP21.53■■□□□ 1.04
CTSD-212ENST00000637815 ADGRA1Q86SQ6 560 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 MIGA1Q8NAN2 632 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 IQSEC3Q9UPP2 1182 aaPredicted RBP21.53■■□□□ 1.04
CTSD-212ENST00000637815 STK36Q9NRP7 1315 aa21.53■■□□□ 1.04
CTSD-212ENST00000637815 MYH6P13533 1939 aa21.52■■□□□ 1.04
CTSD-212ENST00000637815 MYH2Q9UKX2 1941 aa21.52■■□□□ 1.04
CTSD-212ENST00000637815 PLCB2Q00722 1185 aa21.52■■□□□ 1.04
CTSD-212ENST00000637815 STK38Q15208 465 aa21.52■■□□□ 1.04
CTSD-212ENST00000637815 CAVIN4Q5BKX8 364 aa21.52■■□□□ 1.04
CTSD-212ENST00000637815 FMR1NBQ8N0W7 255 aaPredicted RBP21.52■■□□□ 1.04
CTSD-212ENST00000637815 CELF1Q92879 486 aaKnown RBP21.52■■□□□ 1.04
CTSD-212ENST00000637815 SLC12A7Q9Y666 1083 aa21.52■■□□□ 1.04
CTSD-212ENST00000637815 SBF2Q86WG5 1849 aa21.52■■□□□ 1.04
CTSD-212ENST00000637815 RANBP6O60518 1105 aaKnown RBP21.51■■□□□ 1.03
CTSD-212ENST00000637815 ZNF165P49910 485 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 KIAA2012Q0VF49 1180 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 BICDL1Q6ZP65 573 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 AIFM3Q96NN9 605 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 DNAJC25Q9H1X3 360 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 RNF41Q9H4P4 317 aaPredicted RBP21.51■■□□□ 1.03
CTSD-212ENST00000637815 CCDC69A6NI79 296 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 WTIPA6NIX2 430 aaPredicted RBP21.51■■□□□ 1.03
CTSD-212ENST00000637815 SPTLC2O15270 562 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 SYNE3Q6ZMZ3 975 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 PHKBQ93100 1093 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 FAM84BQ96KN1 310 aaPredicted RBP21.51■■□□□ 1.03
CTSD-212ENST00000637815 ABCF2Q9UG63 623 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 ANAPC4Q9UJX5 808 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 CCDC88AQ3V6T2 1871 aa21.51■■□□□ 1.03
CTSD-212ENST00000637815 GTF2E1P29083 439 aaPredicted RBP21.5■■□□□ 1.03
CTSD-212ENST00000637815 IARSP41252 1262 aaKnown RBP21.5■■□□□ 1.03
CTSD-212ENST00000637815 SART3Q15020 963 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms