RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 AKAP2Q9Y2D5 859 aa24.9■■□□□ 1.58
CLN6-222ENST00000637667 OTOFQ9HC10 1997 aa24.9■■□□□ 1.58
CLN6-222ENST00000637667 TFCP2Q12800 502 aa24.89■■□□□ 1.58
CLN6-222ENST00000637667 MYH13Q9UKX3 1938 aa24.88■■□□□ 1.57
CLN6-222ENST00000637667 A0A1B0GUL7 405 aa24.88■■□□□ 1.57
CLN6-222ENST00000637667 SOX10P56693 466 aa24.88■■□□□ 1.57
CLN6-222ENST00000637667 CRHR2Q13324 411 aa24.88■■□□□ 1.57
CLN6-222ENST00000637667 RASGRF1Q13972 1273 aa24.88■■□□□ 1.57
CLN6-222ENST00000637667 ZKSCAN2Q63HK3 967 aa24.88■■□□□ 1.57
CLN6-222ENST00000637667 DCAF15Q66K64 600 aa24.88■■□□□ 1.57
CLN6-222ENST00000637667 DIEXFQ68CQ4 756 aaKnown RBP24.88■■□□□ 1.57
CLN6-222ENST00000637667 FBXO46Q6PJ61 603 aaPredicted RBP24.88■■□□□ 1.57
CLN6-222ENST00000637667 ZGPATQ8N5A5 531 aaKnown RBP24.88■■□□□ 1.57
CLN6-222ENST00000637667 WRNIP1Q96S55 665 aa24.88■■□□□ 1.57
CLN6-222ENST00000637667 SPDYE5A6NIY4 337 aa24.87■■□□□ 1.57
CLN6-222ENST00000637667 GTF2A2P52657 109 aa24.87■■□□□ 1.57
CLN6-222ENST00000637667 FAM151AQ8WW52 585 aa24.87■■□□□ 1.57
CLN6-222ENST00000637667 BRI3BPQ8WY22 251 aa24.87■■□□□ 1.57
CLN6-222ENST00000637667 OTUD5Q96G74 571 aa24.87■■□□□ 1.57
CLN6-222ENST00000637667 XAGE2Q96GT9 111 aa24.87■■□□□ 1.57
CLN6-222ENST00000637667 SNCAIPQ9Y6H5 919 aa24.87■■□□□ 1.57
CLN6-222ENST00000637667 LAMB1P07942 1786 aa24.87■■□□□ 1.57
CLN6-222ENST00000637667 PDS5AQ29RF7 1337 aaKnown RBP24.86■■□□□ 1.57
CLN6-222ENST00000637667 NFIAQ12857 509 aa24.86■■□□□ 1.57
CLN6-222ENST00000637667 MVPQ14764 893 aaKnown RBP24.86■■□□□ 1.57
CLN6-222ENST00000637667 TMEM57Q8N5G2 664 aa24.86■■□□□ 1.57
CLN6-222ENST00000637667 CCL15-CCL14A0A0B4J2E2 113 aa24.85■■□□□ 1.57
CLN6-222ENST00000637667 PNMA6EA0A0J9YXQ4 647 aa24.85■■□□□ 1.57
CLN6-222ENST00000637667 TCP10Q12799 353 aa24.85■■□□□ 1.57
CLN6-222ENST00000637667 CCL15Q16663 113 aa24.85■■□□□ 1.57
CLN6-222ENST00000637667 MIGA2Q7L4E1 593 aa24.85■■□□□ 1.57
CLN6-222ENST00000637667 ERO1BQ86YB8 467 aa24.85■■□□□ 1.57
CLN6-222ENST00000637667 ZKSCAN4Q969J2 545 aaPredicted RBP24.85■■□□□ 1.57
CLN6-222ENST00000637667 ZNF341Q9BYN7 854 aa24.85■■□□□ 1.57
CLN6-222ENST00000637667 USP40Q9NVE5 1235 aa24.85■■□□□ 1.57
CLN6-222ENST00000637667 FAM198AQ9UFP1 575 aa24.84■■□□□ 1.57
CLN6-222ENST00000637667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.84■■□□□ 1.57
CLN6-222ENST00000637667 DZIP1Q86YF9 867 aaKnown RBP24.83■■□□□ 1.57
CLN6-222ENST00000637667 ERO1AQ96HE7 468 aa24.83■■□□□ 1.57
CLN6-222ENST00000637667 NEUROD6Q96NK8 337 aa24.83■■□□□ 1.57
CLN6-222ENST00000637667 ABCF2Q9UG63 623 aa24.83■■□□□ 1.57
CLN6-222ENST00000637667 TRIM17Q9Y577 477 aa24.83■■□□□ 1.57
CLN6-222ENST00000637667 GAKO14976 1311 aa24.83■■□□□ 1.56
CLN6-222ENST00000637667 G3BP1Q13283 466 aaKnown RBP eCLIP24.82■■□□□ 1.56
CLN6-222ENST00000637667 SPTY2D1Q68D10 685 aaPredicted RBP24.82■■□□□ 1.56
CLN6-222ENST00000637667 OTOP1Q7RTM1 612 aa24.82■■□□□ 1.56
CLN6-222ENST00000637667 CETPP11597 493 aa24.81■■□□□ 1.56
CLN6-222ENST00000637667 INPP5BP32019 993 aa24.81■■□□□ 1.56
CLN6-222ENST00000637667 PPIL2Q13356 520 aa24.81■■□□□ 1.56
CLN6-222ENST00000637667 TAF1CQ15572 869 aaPredicted RBP24.81■■□□□ 1.56
CLN6-222ENST00000637667 SLF2Q8IX21 1173 aa24.81■■□□□ 1.56
CLN6-222ENST00000637667 PDE4DIPQ5VU43 2346 aa24.81■■□□□ 1.56
CLN6-222ENST00000637667 IRF6O14896 467 aa24.8■■□□□ 1.56
CLN6-222ENST00000637667 SNAPC2Q13487 334 aa24.8■■□□□ 1.56
CLN6-222ENST00000637667 GORABQ5T7V8 394 aa24.8■■□□□ 1.56
CLN6-222ENST00000637667 ZFPM1Q8IX07 1006 aa24.8■■□□□ 1.56
CLN6-222ENST00000637667 FAM43AQ8N2R8 423 aa24.8■■□□□ 1.56
CLN6-222ENST00000637667 CD99L2Q8TCZ2 262 aa24.8■■□□□ 1.56
CLN6-222ENST00000637667 FAM163AQ96GL9 167 aaPredicted RBP24.8■■□□□ 1.56
CLN6-222ENST00000637667 ZFYVE28Q9HCC9 887 aa24.8■■□□□ 1.56
CLN6-222ENST00000637667 ZNF112Q9UJU3 913 aa24.8■■□□□ 1.56
CLN6-222ENST00000637667 SP3Q02447 781 aa24.79■■□□□ 1.56
CLN6-222ENST00000637667 IDI2Q9BXS1 227 aa24.79■■□□□ 1.56
CLN6-222ENST00000637667 PCDH10Q9P2E7 1040 aa24.79■■□□□ 1.56
CLN6-222ENST00000637667 RGS3P49796 1198 aa24.78■■□□□ 1.56
CLN6-222ENST00000637667 PPATQ06203 517 aa24.78■■□□□ 1.56
CLN6-222ENST00000637667 POLA2Q14181 598 aa24.78■■□□□ 1.56
CLN6-222ENST00000637667 ERICH6Q7L0X2 663 aa24.78■■□□□ 1.56
CLN6-222ENST00000637667 FTSJ3Q8IY81 847 aaKnown RBP24.78■■□□□ 1.56
CLN6-222ENST00000637667 HMG20BQ9P0W2 317 aa24.78■■□□□ 1.56
CLN6-222ENST00000637667 ENTPD3O75355 529 aa24.77■■□□□ 1.56
CLN6-222ENST00000637667 SPATA5Q8NB90 893 aa24.77■■□□□ 1.56
CLN6-222ENST00000637667 EFCC1Q9HA90 598 aa24.77■■□□□ 1.56
CLN6-222ENST00000637667 BTBD19C9JJ37 291 aa24.76■■□□□ 1.55
CLN6-222ENST00000637667 ARID4AP29374 1257 aaPredicted RBP24.76■■□□□ 1.55
CLN6-222ENST00000637667 BTDP43251 543 aa24.76■■□□□ 1.55
CLN6-222ENST00000637667 MECOMQ03112 1051 aa24.76■■□□□ 1.55
CLN6-222ENST00000637667 PI16Q6UXB8 463 aa24.76■■□□□ 1.55
CLN6-222ENST00000637667 ZCCHC17Q9NP64 241 aaKnown RBP24.76■■□□□ 1.55
CLN6-222ENST00000637667 MROH7-TTC4A0A0A0MT08 1334 aa24.76■■□□□ 1.55
CLN6-222ENST00000637667 RFX7Q2KHR2 1363 aa24.76■■□□□ 1.55
CLN6-222ENST00000637667 WDHD1O75717 1129 aaPredicted RBP24.75■■□□□ 1.55
CLN6-222ENST00000637667 RLBP1P12271 317 aa24.75■■□□□ 1.55
CLN6-222ENST00000637667 ATP8B2P98198 1209 aa24.75■■□□□ 1.55
CLN6-222ENST00000637667 NOL9Q5SY16 702 aaKnown RBP24.75■■□□□ 1.55
CLN6-222ENST00000637667 ITPRIPQ8IWB1 547 aa24.75■■□□□ 1.55
CLN6-222ENST00000637667 SSH3Q8TE77 659 aa24.75■■□□□ 1.55
CLN6-222ENST00000637667 C1orf115Q9H7X2 142 aa24.75■■□□□ 1.55
CLN6-222ENST00000637667 ZBED9Q6R2W3 1325 aa24.75■■□□□ 1.55
CLN6-222ENST00000637667 MYH2Q9UKX2 1941 aa24.74■■□□□ 1.55
CLN6-222ENST00000637667 UQCRFS1P1P0C7P4 283 aa24.74■■□□□ 1.55
CLN6-222ENST00000637667 CAP1Q01518 475 aa24.74■■□□□ 1.55
CLN6-222ENST00000637667 ZSCAN29Q8IWY8 852 aaPredicted RBP24.74■■□□□ 1.55
CLN6-222ENST00000637667 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.74■■□□□ 1.55
CLN6-222ENST00000637667 ZNF384Q8TF68 577 aa24.74■■□□□ 1.55
CLN6-222ENST00000637667 PTPN22Q9Y2R2 807 aa24.74■■□□□ 1.55
CLN6-222ENST00000637667 ATRNL1Q5VV63 1379 aa24.74■■□□□ 1.55
CLN6-222ENST00000637667 GPR75-ASB3A0A0A6YYF3 556 aa24.73■■□□□ 1.55
CLN6-222ENST00000637667 OS9Q13438 667 aaPredicted RBP24.73■■□□□ 1.55
CLN6-222ENST00000637667 TBC1D9Q6ZT07 1266 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms