RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 MIGA2Q7L4E1 593 aa19.64■□□□□ 0.73
PDLIM3-213ENST00000629667 RPAP1Q9BWH6 1393 aaPredicted RBP19.64■□□□□ 0.73
PDLIM3-213ENST00000629667 ANKRD44Q8N8A2 993 aa19.63■□□□□ 0.73
PDLIM3-213ENST00000629667 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-213ENST00000629667 KLHDC4Q8TBB5 520 aa19.63■□□□□ 0.73
PDLIM3-213ENST00000629667 KIF16BQ96L93 1317 aa19.62■□□□□ 0.73
PDLIM3-213ENST00000629667 ANP32CO43423 234 aa19.62■□□□□ 0.73
PDLIM3-213ENST00000629667 INPP5BP32019 993 aa19.62■□□□□ 0.73
PDLIM3-213ENST00000629667 PUM3Q15397 648 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-213ENST00000629667 C17orf99Q6UX52 265 aa19.62■□□□□ 0.73
PDLIM3-213ENST00000629667 CPA4Q9UI42 421 aa19.62■□□□□ 0.73
PDLIM3-213ENST00000629667 H0YGN5 161 aa19.61■□□□□ 0.73
PDLIM3-213ENST00000629667 HOXD10P28358 340 aa19.61■□□□□ 0.73
PDLIM3-213ENST00000629667 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
PDLIM3-213ENST00000629667 PSMC4P43686 418 aa19.61■□□□□ 0.73
PDLIM3-213ENST00000629667 ANKRD23Q86SG2 305 aa19.61■□□□□ 0.73
PDLIM3-213ENST00000629667 WDR66Q8TBY9 1149 aa19.61■□□□□ 0.73
PDLIM3-213ENST00000629667 FAM151AQ8WW52 585 aa19.61■□□□□ 0.73
PDLIM3-213ENST00000629667 PDHXO00330 501 aa19.6■□□□□ 0.73
PDLIM3-213ENST00000629667 FGFR2P21802 821 aa19.6■□□□□ 0.73
PDLIM3-213ENST00000629667 RAET1EQ8TD07 263 aa19.6■□□□□ 0.73
PDLIM3-213ENST00000629667 SRRDQ9UH36 339 aa19.6■□□□□ 0.73
PDLIM3-213ENST00000629667 FMNL1O95466 1100 aaPredicted RBP19.59■□□□□ 0.73
PDLIM3-213ENST00000629667 SLC5A1P13866 664 aa19.59■□□□□ 0.73
PDLIM3-213ENST00000629667 TCP10Q12799 353 aa19.59■□□□□ 0.73
PDLIM3-213ENST00000629667 MTFR1Q15390 333 aa19.59■□□□□ 0.73
PDLIM3-213ENST00000629667 TRIM47Q96LD4 638 aa19.59■□□□□ 0.73
PDLIM3-213ENST00000629667 CEP290O15078 2479 aa19.58■□□□□ 0.73
PDLIM3-213ENST00000629667 OSBPP22059 807 aa19.58■□□□□ 0.72
PDLIM3-213ENST00000629667 CTGFP29279 349 aa19.58■□□□□ 0.72
PDLIM3-213ENST00000629667 MRPL50Q8N5N7 158 aaKnown RBP19.58■□□□□ 0.72
PDLIM3-213ENST00000629667 NKX2-3Q8TAU0 364 aa19.58■□□□□ 0.72
PDLIM3-213ENST00000629667 LPIN2Q92539 896 aa19.58■□□□□ 0.72
PDLIM3-213ENST00000629667 DPF3Q92784 378 aa19.58■□□□□ 0.72
PDLIM3-213ENST00000629667 ZNF112Q9UJU3 913 aa19.58■□□□□ 0.72
PDLIM3-213ENST00000629667 KCNH4Q9UQ05 1017 aa19.58■□□□□ 0.72
PDLIM3-213ENST00000629667 MGAMO43451 1857 aa19.58■□□□□ 0.72
PDLIM3-213ENST00000629667 PTPRCP08575 1304 aa19.57■□□□□ 0.72
PDLIM3-213ENST00000629667 MYPNQ86TC9 1320 aa19.57■□□□□ 0.72
PDLIM3-213ENST00000629667 GRK4P32298 578 aa19.57■□□□□ 0.72
PDLIM3-213ENST00000629667 FAM9BQ8IZU0 186 aa19.57■□□□□ 0.72
PDLIM3-213ENST00000629667 DAGLAQ9Y4D2 1042 aa19.57■□□□□ 0.72
PDLIM3-213ENST00000629667 EYA2O00167 538 aa19.56■□□□□ 0.72
PDLIM3-213ENST00000629667 DIXDC1Q155Q3 683 aa19.56■□□□□ 0.72
PDLIM3-213ENST00000629667 CDC42EP5Q6NZY7 148 aa19.56■□□□□ 0.72
PDLIM3-213ENST00000629667 CHRDL2Q6WN34 429 aa19.56■□□□□ 0.72
PDLIM3-213ENST00000629667 SHISA4Q96DD7 197 aa19.56■□□□□ 0.72
PDLIM3-213ENST00000629667 PARK7Q99497 189 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-213ENST00000629667 USP44Q9H0E7 712 aa19.56■□□□□ 0.72
PDLIM3-213ENST00000629667 BIN2Q9UBW5 565 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-213ENST00000629667 ADGRA2Q96PE1 1338 aa19.55■□□□□ 0.72
PDLIM3-213ENST00000629667 NFIAQ12857 509 aa19.55■□□□□ 0.72
PDLIM3-213ENST00000629667 NOL9Q5SY16 702 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-213ENST00000629667 TRIOBPQ9H2D6 2365 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 DOCK2Q92608 1830 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 LDHBP07195 334 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 GJB1P08034 283 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 CCL5P13501 91 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 PRDX5P30044 214 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 GJA8P48165 433 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 FCGRTP55899 365 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 UBXN2AP68543 259 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 RNF208Q9H0X6 261 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 USP40Q9NVE5 1235 aa19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 GNL3LQ9NVN8 582 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-213ENST00000629667 MYH2Q9UKX2 1941 aa19.53■□□□□ 0.72
PDLIM3-213ENST00000629667 CXCL11O14625 94 aa19.53■□□□□ 0.72
PDLIM3-213ENST00000629667 RFX5P48382 616 aaPredicted RBP19.53■□□□□ 0.72
PDLIM3-213ENST00000629667 MOGSQ13724 837 aa19.53■□□□□ 0.72
PDLIM3-213ENST00000629667 HTATIP2Q9BUP3 242 aa19.53■□□□□ 0.72
PDLIM3-213ENST00000629667 FAM198AQ9UFP1 575 aa19.53■□□□□ 0.72
PDLIM3-213ENST00000629667 SZT2Q5T011 3432 aa19.52■□□□□ 0.72
PDLIM3-213ENST00000629667 CYP2C8P10632 490 aa19.52■□□□□ 0.72
PDLIM3-213ENST00000629667 PRKCZQ05513 592 aa19.52■□□□□ 0.72
PDLIM3-213ENST00000629667 BCRP11274 1271 aa19.51■□□□□ 0.71
PDLIM3-213ENST00000629667 ATP2B3Q16720 1220 aa19.51■□□□□ 0.71
PDLIM3-213ENST00000629667 GPAT2Q6NUI2 795 aa19.51■□□□□ 0.71
PDLIM3-213ENST00000629667 FASTKD5Q7L8L6 764 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-213ENST00000629667 ATG9AQ7Z3C6 839 aa19.51■□□□□ 0.71
PDLIM3-213ENST00000629667 SLAIN1Q8ND83 568 aa19.51■□□□□ 0.71
PDLIM3-213ENST00000629667 PICK1Q9NRD5 415 aa19.51■□□□□ 0.71
PDLIM3-213ENST00000629667 RBM27Q9P2N5 1060 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-213ENST00000629667 ZFPM1Q8IX07 1006 aa19.5■□□□□ 0.71
PDLIM3-213ENST00000629667 SSH1Q8WYL5 1049 aa19.5■□□□□ 0.71
PDLIM3-213ENST00000629667 SIL1Q9H173 461 aa19.5■□□□□ 0.71
PDLIM3-213ENST00000629667 CEP126Q9P2H0 1117 aa19.5■□□□□ 0.71
PDLIM3-213ENST00000629667 DENND2AQ9ULE3 1009 aa19.5■□□□□ 0.71
PDLIM3-213ENST00000629667 ZHX2Q9Y6X8 837 aa19.5■□□□□ 0.71
PDLIM3-213ENST00000629667 ZNF521Q96K83 1311 aa19.5■□□□□ 0.71
PDLIM3-213ENST00000629667 SALL1Q9NSC2 1324 aa19.5■□□□□ 0.71
PDLIM3-213ENST00000629667 UBE2Q1Q7Z7E8 422 aa19.49■□□□□ 0.71
PDLIM3-213ENST00000629667 ZSCAN29Q8IWY8 852 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-213ENST00000629667 SCYL3Q8IZE3 742 aa19.49■□□□□ 0.71
PDLIM3-213ENST00000629667 U2AF1L4Q8WU68 220 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-213ENST00000629667 FBXO3Q9UK99 471 aa19.49■□□□□ 0.71
PDLIM3-213ENST00000629667 GABRQQ9UN88 632 aa19.49■□□□□ 0.71
PDLIM3-213ENST00000629667 NR2E3Q9Y5X4 410 aa19.49■□□□□ 0.71
PDLIM3-213ENST00000629667 PTPRFP10586 1907 aa19.49■□□□□ 0.71
PDLIM3-213ENST00000629667 A0A0G2JLL6 359 aaPredicted RBP19.48■□□□□ 0.71
PDLIM3-213ENST00000629667 SEMA3EO15041 775 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms