RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NR1H3Q13133 447 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 SEMA3FQ13275 785 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 PRKG1Q13976 671 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L2Q6R6M4 530 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 LYPD8Q6UX82 237 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L1Q7RTZ2 530 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 SEC31BQ9NQW1 1179 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 NOVA2Q9UNW9 492 aaKnown RBP6.14□□□□□ -1.43
LINC00550-201ENST00000629293 BCORQ6W2J9 1755 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 FAM196BA6NMK8 535 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 IRS4O14654 1257 aaPredicted RBP6.14□□□□□ -1.43
LINC00550-201ENST00000629293 GPSM2P81274 684 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 KIF23Q02241 960 aaPredicted RBP6.14□□□□□ -1.43
LINC00550-201ENST00000629293 LMOD3Q0VAK6 560 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 ECM1Q16610 540 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 POLLQ9UGP5 575 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 ERBB4Q15303 1308 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 KIF4BQ2VIQ3 1234 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 SLC10A5Q5PT55 438 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 MORN1Q5T089 497 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 B4GALNT3Q6L9W6 998 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 NUP98P52948 1817 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 CA12O43570 354 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 RPS8P62241 208 aaKnown RBP6.13□□□□□ -1.43
LINC00550-201ENST00000629293 RGMBQ6NW40 437 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 MOB2Q70IA6 237 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 ANP32EQ9BTT0 268 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 LTBP1Q14766 1721 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 SNED1Q8TER0 1413 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 SOWAHDA6NJG2 315 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 ANGEL2Q5VTE6 544 aaKnown RBP6.13□□□□□ -1.43
LINC00550-201ENST00000629293 LRP10Q7Z4F1 713 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 EYA3Q99504 573 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 MYD88Q99836 296 aa6.13□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L15C9J2P7 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L10C9JJH3 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L13C9JLJ4 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L12C9JPN9 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L11C9JVI0 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L21D6R901 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L18D6R9N7 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L22D6RA61 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L17D6RBQ6 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L19D6RCP7 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L20D6RJB6 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L24Q0WX57 530 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 DUSP27Q5VZP5 1158 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 KCNK17Q96T54 332 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 RTFDC1Q9BY42 306 aaPredicted RBP6.12□□□□□ -1.43
LINC00550-201ENST00000629293 HDAC9Q9UKV0 1011 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 IBTKQ9P2D0 1353 aaPredicted RBP6.12□□□□□ -1.43
LINC00550-201ENST00000629293 RETREG3Q86VR2 466 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 PLBD2Q8NHP8 589 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 CLP1Q92989 425 aaKnown RBP6.12□□□□□ -1.43
LINC00550-201ENST00000629293 SLC4A5Q9BY07 1137 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 PHAXQ9H814 394 aaKnown RBP6.12□□□□□ -1.43
LINC00550-201ENST00000629293 DBF4Q9UBU7 674 aaPredicted RBP6.12□□□□□ -1.43
LINC00550-201ENST00000629293 RIC1Q4ADV7 1423 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 CUL9Q8IWT3 2517 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 TAF1P21675 1872 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 CFHP08603 1231 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 HOXB1P14653 301 aaPredicted RBP6.12□□□□□ -1.43
LINC00550-201ENST00000629293 TBC1D16Q8TBP0 767 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 TSC1Q92574 1164 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 GGA1Q9UJY5 639 aa6.12□□□□□ -1.43
LINC00550-201ENST00000629293 WTIPA6NIX2 430 aaPredicted RBP6.11□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L5A8MUK1 530 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 UBE2Q2LH0YL09 131 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 PSEN2P49810 448 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 RRP1P56182 461 aaKnown RBP6.11□□□□□ -1.43
LINC00550-201ENST00000629293 SCARF1Q14162 830 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 DPF2Q92785 391 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 VPS33BQ9H267 617 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 RABGEF1Q9UJ41 708 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 A0A0C4DFX4 3053 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 POLR2AP24928 1970 aaKnown RBP6.11□□□□□ -1.43
LINC00550-201ENST00000629293 ZNF16P17020 682 aaPredicted RBP6.11□□□□□ -1.43
LINC00550-201ENST00000629293 CDCA5Q96FF9 252 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 MXD3Q9BW11 206 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 RNF186Q9NXI6 227 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 ADAMTS8Q9UP79 889 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 BHMG1C9JSJ3 638 aaPredicted RBP6.11□□□□□ -1.43
LINC00550-201ENST00000629293 CHL1O00533 1208 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 TBC1D8O95759 1140 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 TRAF7Q6Q0C0 670 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 TMC4Q7Z404 712 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 NPAS4Q8IUM7 802 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 SEPT9Q9UHD8 586 aaPredicted RBP6.11□□□□□ -1.43
LINC00550-201ENST00000629293 SLC27A5Q9Y2P5 690 aa6.11□□□□□ -1.43
LINC00550-201ENST00000629293 ARFGEF2Q9Y6D5 1785 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 CDHR2Q9BYE9 1310 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 RTL9Q8NET4 1388 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 CLDN10P78369 228 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 CCDC152Q4G0S7 254 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 THAP11Q96EK4 314 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 CSRNP1Q96S65 589 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 HYPKQ9NX55 129 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 SALL2Q9Y467 1007 aaPredicted RBP6.1□□□□□ -1.43
LINC00550-201ENST00000629293 ZBBXA8MT70 800 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 APAF1O14727 1248 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms