RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 USP44Q9H0E7 712 aa9.71□□□□□ -0.86
TCF4-260ENST00000627685 BSDC1Q9NW68 430 aaPredicted RBP9.71□□□□□ -0.86
TCF4-260ENST00000627685 ZNRF3Q9ULT6 936 aa9.71□□□□□ -0.86
TCF4-260ENST00000627685 CT47B1P0C2W7 299 aaPredicted RBP9.7□□□□□ -0.86
TCF4-260ENST00000627685 EPHX2P34913 555 aa9.7□□□□□ -0.86
TCF4-260ENST00000627685 RFX5P48382 616 aaPredicted RBP9.7□□□□□ -0.86
TCF4-260ENST00000627685 EIF6P56537 245 aaKnown RBP9.7□□□□□ -0.86
TCF4-260ENST00000627685 FMR1Q06787 632 aaKnown RBP eCLIP9.7□□□□□ -0.86
TCF4-260ENST00000627685 SPRYD7Q5W111 196 aa9.7□□□□□ -0.86
TCF4-260ENST00000627685 LDHDQ86WU2 507 aa9.7□□□□□ -0.86
TCF4-260ENST00000627685 NIM1KQ8IY84 436 aa9.7□□□□□ -0.86
TCF4-260ENST00000627685 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
TCF4-260ENST00000627685 DBNDD1Q9H9R9 158 aa9.7□□□□□ -0.86
TCF4-260ENST00000627685 GPRC5DQ9NZD1 345 aa9.7□□□□□ -0.86
TCF4-260ENST00000627685 HACL1Q9UJ83 578 aa9.7□□□□□ -0.86
TCF4-260ENST00000627685 NSFL1CQ9UNZ2 370 aaKnown RBP9.7□□□□□ -0.86
TCF4-260ENST00000627685 XDHP47989 1333 aa9.7□□□□□ -0.86
TCF4-260ENST00000627685 ECE2O60344 883 aa9.69□□□□□ -0.86
TCF4-260ENST00000627685 GFRA3O60609 400 aa9.69□□□□□ -0.86
TCF4-260ENST00000627685 GMPSP49915 693 aaPredicted RBP9.69□□□□□ -0.86
TCF4-260ENST00000627685 MMP16P51512 607 aa9.69□□□□□ -0.86
TCF4-260ENST00000627685 RSBN1LQ6PCB5 846 aaPredicted RBP9.69□□□□□ -0.86
TCF4-260ENST00000627685 ZBED9Q6R2W3 1325 aa9.69□□□□□ -0.86
TCF4-260ENST00000627685 PNMA8AQ86V59 439 aaPredicted RBP9.69□□□□□ -0.86
TCF4-260ENST00000627685 RETREG3Q86VR2 466 aa9.69□□□□□ -0.86
TCF4-260ENST00000627685 VGLL2Q8N8G2 317 aa9.69□□□□□ -0.86
TCF4-260ENST00000627685 ZNF594Q96JF6 807 aaPredicted RBP9.69□□□□□ -0.86
TCF4-260ENST00000627685 KDM4CQ9H3R0 1056 aa9.69□□□□□ -0.86
TCF4-260ENST00000627685 PGAP2Q9UHJ9 254 aa9.69□□□□□ -0.86
TCF4-260ENST00000627685 PSMD14O00487 310 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 RAD17O75943 681 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 DXOO77932 396 aaKnown RBP9.68□□□□□ -0.86
TCF4-260ENST00000627685 UFL1O94874 794 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 WASHC4Q2M389 1173 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 TPRNQ4KMQ1 711 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 LMBR1LQ6UX01 489 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 ANKRD18AQ8IVF6 992 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 JMYQ8N9B5 988 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 KLRG1Q96E93 195 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 SRCIN1Q9C0H9 1055 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 BICC1Q9H694 974 aaKnown RBP9.68□□□□□ -0.86
TCF4-260ENST00000627685 PCDHB15Q9Y5E8 787 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 ARAP2Q8WZ64 1704 aa9.68□□□□□ -0.86
TCF4-260ENST00000627685 COL1A1P02452 1464 aaPredicted RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 ASTN2O75129 1339 aaPredicted RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 SPTLC1O15269 473 aa9.67□□□□□ -0.86
TCF4-260ENST00000627685 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 BCAR3O75815 825 aa9.67□□□□□ -0.86
TCF4-260ENST00000627685 VIL1P09327 827 aaKnown RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 TRIM27P14373 513 aa9.67□□□□□ -0.86
TCF4-260ENST00000627685 CCT4P50991 539 aaKnown RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 CHRNDQ07001 517 aa9.67□□□□□ -0.86
TCF4-260ENST00000627685 MTMR2Q13614 643 aa9.67□□□□□ -0.86
TCF4-260ENST00000627685 ZNF697Q5TEC3 545 aa9.67□□□□□ -0.86
TCF4-260ENST00000627685 C15orf52Q6ZUT6 534 aaKnown RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 ZNF598Q86UK7 904 aaKnown RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 CDC5LQ99459 802 aaKnown RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 PUS3Q9BZE2 481 aaKnown RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 SMC4Q9NTJ3 1288 aa9.67□□□□□ -0.86
TCF4-260ENST00000627685 NOB1Q9ULX3 412 aaKnown RBP9.67□□□□□ -0.86
TCF4-260ENST00000627685 JUNDP17535 347 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 GJA5P36382 358 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 HNRNPUQ00839 825 aaKnown RBP eCLIP9.66□□□□□ -0.86
TCF4-260ENST00000627685 DACT2Q5SW24 774 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 MYSM1Q5VVJ2 828 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 MAP1SQ66K74 1059 aaPredicted RBP9.66□□□□□ -0.86
TCF4-260ENST00000627685 CIAPIN1Q6FI81 312 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 SLC4A10Q6U841 1118 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 DLK2Q6UY11 383 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 MEIS3Q99687 375 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 MXD3Q9BW11 206 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 GGA1Q9UJY5 639 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 RIPOR2Q9Y4F9 1068 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 GJA3Q9Y6H8 435 aa9.66□□□□□ -0.86
TCF4-260ENST00000627685 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.66□□□□□ -0.86
TCF4-260ENST00000627685 AOX1Q06278 1338 aa9.65□□□□□ -0.86
TCF4-260ENST00000627685 CD2BP2O95400 341 aaKnown RBP9.65□□□□□ -0.86
TCF4-260ENST00000627685 ATP2B4P23634 1241 aa9.65□□□□□ -0.86
TCF4-260ENST00000627685 LMOD1P29536 600 aaPredicted RBP9.65□□□□□ -0.86
TCF4-260ENST00000627685 ZNF280AP59817 542 aaPredicted RBP9.65□□□□□ -0.86
TCF4-260ENST00000627685 TNIP1Q15025 636 aa9.65□□□□□ -0.86
TCF4-260ENST00000627685 LRRC24Q50LG9 513 aa9.65□□□□□ -0.86
TCF4-260ENST00000627685 INTS3Q68E01 1043 aaKnown RBP9.65□□□□□ -0.86
TCF4-260ENST00000627685 USP50Q70EL3 339 aaPredicted RBP9.65□□□□□ -0.86
TCF4-260ENST00000627685 CERS5Q8N5B7 392 aa9.65□□□□□ -0.86
TCF4-260ENST00000627685 KLHDC4Q8TBB5 520 aa9.65□□□□□ -0.86
TCF4-260ENST00000627685 ZNF804BA4D1E1 1349 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 TRAF5O00463 557 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 TAF5LO75529 589 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 RLBP1P12271 317 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 RPIAP49247 311 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 PTPN12Q05209 780 aaKnown RBP9.64□□□□□ -0.87
TCF4-260ENST00000627685 CST9Q5W186 159 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 ATG9AQ7Z3C6 839 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 HELBQ8NG08 1087 aaPredicted RBP9.64□□□□□ -0.87
TCF4-260ENST00000627685 PRR7Q8TB68 274 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 ARHGAP45Q92619 1136 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 DPF2Q92785 391 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms