RNA–Protein interactions for RNA: ENST00000626782.2

CHD2-207, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-207ENST00000626782 SENP2Q9HC62 589 aa12.18□□□□□ -0.46
CHD2-207ENST00000626782 PODXL2Q9NZ53 605 aa12.18□□□□□ -0.46
CHD2-207ENST00000626782 SRCAPQ6ZRS2 3230 aa12.18□□□□□ -0.46
CHD2-207ENST00000626782 MAGEB6P1A0A0J9YX57 407 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 B4E1Z4 1266 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 CHRNA5P30532 468 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 MCM5P33992 734 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 NAA16Q6N069 864 aaPredicted RBP12.17□□□□□ -0.46
CHD2-207ENST00000626782 SMARCC2Q8TAQ2 1214 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 GZF1Q9H116 711 aaPredicted RBP12.17□□□□□ -0.46
CHD2-207ENST00000626782 HPS5Q9UPZ3 1129 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 F13A1P00488 732 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 FGD1P98174 961 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 EVX2Q03828 476 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 CDC37L1Q7L3B6 337 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 NSUN7Q8NE18 718 aaKnown RBP12.17□□□□□ -0.46
CHD2-207ENST00000626782 TBC1D16Q8TBP0 767 aa12.17□□□□□ -0.46
CHD2-207ENST00000626782 WDR19Q8NEZ3 1342 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 SALL1Q9NSC2 1324 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 LAMB1P07942 1786 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 PPEF1O14829 653 aaPredicted RBP12.16□□□□□ -0.46
CHD2-207ENST00000626782 GNAT2P19087 354 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 CCT2P78371 535 aaKnown RBP12.16□□□□□ -0.46
CHD2-207ENST00000626782 ZNF274Q96GC6 653 aaPredicted RBP12.16□□□□□ -0.46
CHD2-207ENST00000626782 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 CYP2D7A0A087X1C5 515 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 PPFIA3O75145 1194 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
CHD2-207ENST00000626782 RALYLQ86SE5 291 aaKnown RBP12.16□□□□□ -0.46
CHD2-207ENST00000626782 GPT2Q8TD30 523 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 GDPD2Q9HCC8 539 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 CD209Q9NNX6 404 aa12.16□□□□□ -0.46
CHD2-207ENST00000626782 CDK5RAP2Q96SN8 1893 aa12.15□□□□□ -0.46
CHD2-207ENST00000626782 IL1R1P14778 569 aa12.15□□□□□ -0.46
CHD2-207ENST00000626782 ATP2B4P23634 1241 aa12.15□□□□□ -0.46
CHD2-207ENST00000626782 TDO2P48775 406 aa12.15□□□□□ -0.46
CHD2-207ENST00000626782 LARP1BQ659C4 914 aaKnown RBP12.15□□□□□ -0.46
CHD2-207ENST00000626782 ZNF804AQ7Z570 1209 aa12.15□□□□□ -0.46
CHD2-207ENST00000626782 RAB11FIP4Q86YS3 637 aa12.15□□□□□ -0.46
CHD2-207ENST00000626782 SP8Q8IXZ3 490 aa12.15□□□□□ -0.46
CHD2-207ENST00000626782 AATFQ9NY61 560 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHD2-207ENST00000626782 ATP6V0A2Q9Y487 856 aa12.15□□□□□ -0.46
CHD2-207ENST00000626782 MYH2Q9UKX2 1941 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 VPS37CA5D8V6 355 aaPredicted RBP12.14□□□□□ -0.47
CHD2-207ENST00000626782 GOLGA6L22H0YM25 854 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 SH2B2O14492 632 aaPredicted RBP12.14□□□□□ -0.47
CHD2-207ENST00000626782 KLHL40Q2TBA0 621 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 AKNAD1Q5T1N1 836 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 IGDCC4Q8TDY8 1250 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 STAG1Q8WVM7 1258 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
CHD2-207ENST00000626782 ECM29Q5VYK3 1845 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 KLF18A0A0U1RQI7 1052 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 KDM4AO75164 1064 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 NPR1P16066 1061 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 PPARAQ07869 468 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 C2CD5Q86YS7 1000 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 STK11IPQ8N1F8 1099 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 ZNF622Q969S3 477 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■■□□ 15.4
CHD2-207ENST00000626782 CNPY2Q9Y2B0 182 aa12.14□□□□□ -0.47
CHD2-207ENST00000626782 PTPDC1A2A3K4 754 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 FDPSP14324 419 aaKnown RBP12.13□□□□□ -0.47
CHD2-207ENST00000626782 TRDNQ13061 729 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 FERMT3Q86UX7 667 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 WDR66Q8TBY9 1149 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
CHD2-207ENST00000626782 NACAP1Q9BZK3 213 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 LY9Q9HBG7 655 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 ANGEL1Q9UNK9 670 aaKnown RBP12.13□□□□□ -0.47
CHD2-207ENST00000626782 ZNF646O15015 1829 aaPredicted RBP12.13□□□□□ -0.47
CHD2-207ENST00000626782 GOLGA8BA8MQT2 603 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
CHD2-207ENST00000626782 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
CHD2-207ENST00000626782 FAM173BQ6P4H8 233 aa12.13□□□□□ -0.47
CHD2-207ENST00000626782 DCP1AQ9NPI6 582 aaPredicted RBP12.13□□□□□ -0.47
CHD2-207ENST00000626782 NAP1L2Q9ULW6 460 aaPredicted RBP12.13□□□□□ -0.47
CHD2-207ENST00000626782 DDX49Q9Y6V7 483 aaKnown RBP12.13□□□□□ -0.47
CHD2-207ENST00000626782 MYH15Q9Y2K3 1946 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 UTRNP46939 3433 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 DDX60LQ5H9U9 1706 aaKnown RBP12.12□□□□□ -0.47
CHD2-207ENST00000626782 MINDY4BA8MYZ0 360 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
CHD2-207ENST00000626782 PTMSP20962 102 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 PDE6BP35913 854 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 DNM1Q05193 864 aaKnown RBP12.12□□□□□ -0.47
CHD2-207ENST00000626782 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 MFSD6Q6ZSS7 791 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 TMC4Q7Z404 712 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 MKRN1Q9UHC7 482 aaKnown RBP12.12□□□□□ -0.47
CHD2-207ENST00000626782 ADAMTSL1Q8N6G6 1762 aa12.12□□□□□ -0.47
CHD2-207ENST00000626782 RXRAP19793 462 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 APOA5Q6Q788 366 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms