RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 MRE11P49959 708 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00538-201ENST00000626109 RAB3GAP1Q15042 981 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 KIF2CQ99661 725 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 FHDC1Q9C0D6 1143 aaPredicted RBP13.72□□□□□ -0.21
LINC00538-201ENST00000626109 DLEC1Q9Y238 1755 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 EYA2O00167 538 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 GPR37O15354 613 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 BBOX1O75936 387 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 CIAO1O76071 339 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 TMC4Q7Z404 712 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 MSL3Q8N5Y2 521 aaKnown RBP13.72□□□□□ -0.21
LINC00538-201ENST00000626109 EXOC6BQ9Y2D4 811 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 COL4A3BPQ9Y5P4 624 aa13.72□□□□□ -0.21
LINC00538-201ENST00000626109 KIAA1551Q9HCM1 1747 aa13.71□□□□□ -0.21
LINC00538-201ENST00000626109 PPEF1O14829 653 aaPredicted RBP13.71□□□□□ -0.21
LINC00538-201ENST00000626109 VAMP1P23763 118 aa13.71□□□□□ -0.21
LINC00538-201ENST00000626109 CEP120Q8N960 986 aa13.71□□□□□ -0.21
LINC00538-201ENST00000626109 C1orf131Q8NDD1 294 aaKnown RBP13.71□□□□□ -0.21
LINC00538-201ENST00000626109 TNPO1Q92973 898 aaKnown RBP13.71□□□□□ -0.21
LINC00538-201ENST00000626109 BSDC1Q9NW68 430 aaPredicted RBP13.71□□□□□ -0.21
LINC00538-201ENST00000626109 IL15P40933 162 aaPredicted RBP13.7□□□□□ -0.22
LINC00538-201ENST00000626109 SH3D19Q5HYK7 790 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 PRPF40BQ6NWY9 871 aaKnown RBP13.7□□□□□ -0.22
LINC00538-201ENST00000626109 ERC1Q8IUD2 1116 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 TTLL6Q8N841 843 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 PUS3Q9BZE2 481 aaKnown RBP13.7□□□□□ -0.22
LINC00538-201ENST00000626109 PIM2Q9P1W9 311 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 COL4A1P02462 1669 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 REC8O95072 547 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 GSPT1P15170 499 aaKnown RBP13.7□□□□□ -0.22
LINC00538-201ENST00000626109 KCNA3P22001 575 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00538-201ENST00000626109 PUS10Q3MIT2 529 aaKnown RBP13.7□□□□□ -0.22
LINC00538-201ENST00000626109 LRRC24Q50LG9 513 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 EGFL6Q8IUX8 553 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
LINC00538-201ENST00000626109 NLGN2Q8NFZ4 835 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
LINC00538-201ENST00000626109 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
LINC00538-201ENST00000626109 SPEF2Q9C093 1822 aa13.69□□□□□ -0.22
LINC00538-201ENST00000626109 METTL24Q5JXM2 366 aa13.69□□□□□ -0.22
LINC00538-201ENST00000626109 ICE2Q659A1 982 aa13.69□□□□□ -0.22
LINC00538-201ENST00000626109 STAG1Q8WVM7 1258 aa13.69□□□□□ -0.22
LINC00538-201ENST00000626109 MROH5Q6ZUA9 1318 aa13.69□□□□□ -0.22
LINC00538-201ENST00000626109 TAF1P21675 1872 aa13.69□□□□□ -0.22
LINC00538-201ENST00000626109 ATG9AQ7Z3C6 839 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 DDX27Q96GQ7 796 aaKnown RBP13.68□□□□□ -0.22
LINC00538-201ENST00000626109 SYT17Q9BSW7 474 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 XRCC6P12956 609 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC00538-201ENST00000626109 MARSP56192 900 aaKnown RBP13.68□□□□□ -0.22
LINC00538-201ENST00000626109 DALRD3Q5D0E6 543 aaKnown RBP13.68□□□□□ -0.22
LINC00538-201ENST00000626109 SP8Q8IXZ3 490 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 KIF1BPQ96EK5 621 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
LINC00538-201ENST00000626109 ANKRD2Q9GZV1 360 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 SPC25Q9HBM1 224 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 CEP126Q9P2H0 1117 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 KLF15Q9UIH9 416 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 MINPP1Q9UNW1 487 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
LINC00538-201ENST00000626109 ST18O60284 1047 aa13.67□□□□□ -0.22
LINC00538-201ENST00000626109 C7P10643 843 aa13.67□□□□□ -0.22
LINC00538-201ENST00000626109 NUCB2P80303 420 aa13.67□□□□□ -0.22
LINC00538-201ENST00000626109 CHRNDQ07001 517 aa13.67□□□□□ -0.22
LINC00538-201ENST00000626109 BMS1Q14692 1282 aaKnown RBP13.67□□□□□ -0.22
LINC00538-201ENST00000626109 CLEC17AQ6ZS10 378 aa13.67□□□□□ -0.22
LINC00538-201ENST00000626109 RHPN1Q8TCX5 695 aa13.67□□□□□ -0.22
LINC00538-201ENST00000626109 PIK3R5Q8WYR1 880 aa13.67□□□□□ -0.22
LINC00538-201ENST00000626109 LRRCC1Q9C099 1032 aa13.67□□□□□ -0.22
LINC00538-201ENST00000626109 DMGDHQ9UI17 866 aaKnown RBP13.67□□□□□ -0.22
LINC00538-201ENST00000626109 CACNA1SQ13698 1873 aa13.67□□□□□ -0.22
LINC00538-201ENST00000626109 ANKRD33BA6NCL7 494 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 SETDB1Q15047 1291 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 TTC30BQ8N4P2 665 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 PAGR1Q9BTK6 254 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 LRRC37AA6NMS7 1700 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 SASH1O94885 1247 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 ABL2P42684 1182 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 TFCP2Q12800 502 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 PDILTQ8N807 584 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 OSBPL3Q9H4L5 887 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 ZSWIM4Q9H7M6 989 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 PCDH12Q9NPG4 1184 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 ANKIB1Q9P2G1 1089 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 SLX4Q8IY92 1834 aa13.66□□□□□ -0.22
LINC00538-201ENST00000626109 XDHP47989 1333 aa13.65□□□□□ -0.22
LINC00538-201ENST00000626109 BRCA1P38398 1863 aaKnown RBP13.65□□□□□ -0.22
LINC00538-201ENST00000626109 PDE8BO95263 885 aa13.65□□□□□ -0.22
LINC00538-201ENST00000626109 S100BP04271 92 aaPredicted RBP13.65□□□□□ -0.22
LINC00538-201ENST00000626109 SDSP20132 328 aa13.65□□□□□ -0.22
LINC00538-201ENST00000626109 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
LINC00538-201ENST00000626109 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
LINC00538-201ENST00000626109 ADAMTS19Q8TE59 1207 aa13.65□□□□□ -0.22
LINC00538-201ENST00000626109 PRKAG2Q9UGJ0 569 aa13.65□□□□□ -0.22
LINC00538-201ENST00000626109 SFMBT1Q9UHJ3 866 aa13.65□□□□□ -0.22
LINC00538-201ENST00000626109 AKAP2Q9Y2D5 859 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms