RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CYP7A1P22680 504 aa23.14■■□□□ 1.3
TREX1-205ENST00000625293 DNM1Q05193 864 aaKnown RBP23.14■■□□□ 1.3
TREX1-205ENST00000625293 CHMP4CQ96CF2 233 aa23.14■■□□□ 1.3
TREX1-205ENST00000625293 NAPBQ9H115 298 aa23.14■■□□□ 1.3
TREX1-205ENST00000625293 ABCF2Q9UG63 623 aa23.14■■□□□ 1.3
TREX1-205ENST00000625293 BRPF3Q9ULD4 1205 aa23.14■■□□□ 1.3
TREX1-205ENST00000625293 PTPDC1A2A3K4 754 aa23.14■■□□□ 1.29
TREX1-205ENST00000625293 HIBADHP31937 336 aaKnown RBP23.14■■□□□ 1.29
TREX1-205ENST00000625293 CCT2P78371 535 aaKnown RBP23.14■■□□□ 1.29
TREX1-205ENST00000625293 HMGN5P82970 282 aaKnown RBP23.14■■□□□ 1.29
TREX1-205ENST00000625293 TRDNQ13061 729 aa23.14■■□□□ 1.29
TREX1-205ENST00000625293 ZNF384Q8TF68 577 aa23.14■■□□□ 1.29
TREX1-205ENST00000625293 CYB5R4Q7L1T6 521 aa23.13■■□□□ 1.29
TREX1-205ENST00000625293 MIGA1Q8NAN2 632 aa23.13■■□□□ 1.29
TREX1-205ENST00000625293 RIOK1Q9BRS2 568 aaKnown RBP23.13■■□□□ 1.29
TREX1-205ENST00000625293 GRPEL1Q9HAV7 217 aa23.13■■□□□ 1.29
TREX1-205ENST00000625293 NCOA5Q9HCD5 579 aaKnown RBP23.13■■□□□ 1.29
TREX1-205ENST00000625293 RAI14Q9P0K7 980 aa23.13■■□□□ 1.29
TREX1-205ENST00000625293 HPS5Q9UPZ3 1129 aa23.13■■□□□ 1.29
TREX1-205ENST00000625293 TACC3Q9Y6A5 838 aa23.13■■□□□ 1.29
TREX1-205ENST00000625293 SLC4A4Q9Y6R1 1079 aa23.13■■□□□ 1.29
TREX1-205ENST00000625293 NEDD4P46934 1319 aa23.13■■□□□ 1.29
TREX1-205ENST00000625293 DDX11Q96FC9 970 aa23.12■■□□□ 1.29
TREX1-205ENST00000625293 KLF18A0A0U1RQI7 1052 aa23.11■■□□□ 1.29
TREX1-205ENST00000625293 SH2B2O14492 632 aaPredicted RBP23.11■■□□□ 1.29
TREX1-205ENST00000625293 SLC51AQ86UW1 340 aa23.11■■□□□ 1.29
TREX1-205ENST00000625293 TXNRD3Q86VQ6 643 aa23.11■■□□□ 1.29
TREX1-205ENST00000625293 NACAP1Q9BZK3 213 aa23.11■■□□□ 1.29
TREX1-205ENST00000625293 LEMD3Q9Y2U8 911 aa23.11■■□□□ 1.29
TREX1-205ENST00000625293 TCHHQ07283 1943 aa23.1■■□□□ 1.29
TREX1-205ENST00000625293 MAGEB6P1A0A0J9YX57 407 aa23.1■■□□□ 1.29
TREX1-205ENST00000625293 ST5P78524 1137 aa23.1■■□□□ 1.29
TREX1-205ENST00000625293 RESTQ13127 1097 aa23.1■■□□□ 1.29
TREX1-205ENST00000625293 FERMT3Q86UX7 667 aa23.1■■□□□ 1.29
TREX1-205ENST00000625293 ANGEL1Q9UNK9 670 aaKnown RBP23.1■■□□□ 1.29
TREX1-205ENST00000625293 B4E1Z4 1266 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 FIBPO43427 364 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 UBE2HP62256 183 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 CSPP1Q1MSJ5 1256 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 NAA16Q6N069 864 aaPredicted RBP23.09■■□□□ 1.29
TREX1-205ENST00000625293 FAM184AQ8NB25 1140 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 STAG1Q8WVM7 1258 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 CTDSPL2Q05D32 466 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 AKNAD1Q5T1N1 836 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 C15orf52Q6ZUT6 534 aaKnown RBP23.09■■□□□ 1.29
TREX1-205ENST00000625293 NSUN4Q96CB9 384 aaKnown RBP23.09■■□□□ 1.29
TREX1-205ENST00000625293 TMEM87BQ96K49 555 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 XDHP47989 1333 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 C10orf71Q711Q0 1435 aa23.09■■□□□ 1.29
TREX1-205ENST00000625293 KLRG2A4D1S0 409 aaPredicted RBP23.08■■□□□ 1.29
TREX1-205ENST00000625293 GOLGA8BA8MQT2 603 aa23.08■■□□□ 1.29
TREX1-205ENST00000625293 FDPSP14324 419 aaKnown RBP23.08■■□□□ 1.29
TREX1-205ENST00000625293 DPEP1P16444 411 aa23.08■■□□□ 1.29
TREX1-205ENST00000625293 CHRNA5P30532 468 aa23.08■■□□□ 1.29
TREX1-205ENST00000625293 TDO2P48775 406 aa23.08■■□□□ 1.29
TREX1-205ENST00000625293 TMED8Q6PL24 325 aaPredicted RBP23.08■■□□□ 1.29
TREX1-205ENST00000625293 IGDCC4Q8TDY8 1250 aa23.08■■□□□ 1.29
TREX1-205ENST00000625293 NAP1L2Q9ULW6 460 aaPredicted RBP23.08■■□□□ 1.29
TREX1-205ENST00000625293 KIF3AQ9Y496 699 aa23.08■■□□□ 1.29
TREX1-205ENST00000625293 KRT85P78386 507 aa23.07■■□□□ 1.28
TREX1-205ENST00000625293 RPGRQ92834 1020 aaKnown RBP23.07■■□□□ 1.28
TREX1-205ENST00000625293 CNNM2Q9H8M5 875 aa23.07■■□□□ 1.28
TREX1-205ENST00000625293 INCENPQ9NQS7 918 aa23.07■■□□□ 1.28
TREX1-205ENST00000625293 ANAPC4Q9UJX5 808 aa23.07■■□□□ 1.28
TREX1-205ENST00000625293 ELP1O95163 1332 aa23.07■■□□□ 1.28
TREX1-205ENST00000625293 YBX3P16989 372 aaKnown RBP eCLIP23.06■■□□□ 1.28
TREX1-205ENST00000625293 KCNA3P22001 575 aa23.06■■□□□ 1.28
TREX1-205ENST00000625293 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
TREX1-205ENST00000625293 FAM173BQ6P4H8 233 aa23.06■■□□□ 1.28
TREX1-205ENST00000625293 MAST2Q6P0Q8 1798 aa23.06■■□□□ 1.28
TREX1-205ENST00000625293 MECOMQ03112 1051 aa23.06■■□□□ 1.28
TREX1-205ENST00000625293 SGMS1Q86VZ5 419 aa23.06■■□□□ 1.28
TREX1-205ENST00000625293 KRT23Q9C075 422 aa23.06■■□□□ 1.28
TREX1-205ENST00000625293 ZSCAN16Q9H4T2 348 aaPredicted RBP23.06■■□□□ 1.28
TREX1-205ENST00000625293 ANKIB1Q9P2G1 1089 aa23.06■■□□□ 1.28
TREX1-205ENST00000625293 MYH13Q9UKX3 1938 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 H3BQV1 296 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 DHX16O60231 1041 aaKnown RBP23.05■■□□□ 1.28
TREX1-205ENST00000625293 IGSF3O75054 1194 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 DYNLL1P63167 89 aaKnown RBP23.05■■□□□ 1.28
TREX1-205ENST00000625293 GPR162Q16538 588 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 IFFO2Q5TF58 517 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 TTC6Q86TZ1 520 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 SDR42E1Q8WUS8 393 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 RBM17Q96I25 401 aaKnown RBP23.05■■□□□ 1.28
TREX1-205ENST00000625293 BRIP1Q9BX63 1249 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 PANK2Q9BZ23 570 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 LY9Q9HBG7 655 aa23.05■■□□□ 1.28
TREX1-205ENST00000625293 LIFRP42702 1097 aa23.04■■□□□ 1.28
TREX1-205ENST00000625293 MFSD6Q6ZSS7 791 aa23.04■■□□□ 1.28
TREX1-205ENST00000625293 TDRD7Q8NHU6 1098 aaKnown RBP23.04■■□□□ 1.28
TREX1-205ENST00000625293 SYAP1Q96A49 352 aaPredicted RBP23.04■■□□□ 1.28
TREX1-205ENST00000625293 SENP2Q9HC62 589 aa23.04■■□□□ 1.28
TREX1-205ENST00000625293 ZSWIM5Q9P217 1185 aa23.04■■□□□ 1.28
TREX1-205ENST00000625293 TGFB2P61812 414 aa23.04■■□□□ 1.28
TREX1-205ENST00000625293 GPSM2P81274 684 aa23.04■■□□□ 1.28
TREX1-205ENST00000625293 PPARAQ07869 468 aa23.04■■□□□ 1.28
TREX1-205ENST00000625293 GIMAP6Q6P9H5 292 aa23.04■■□□□ 1.28
TREX1-205ENST00000625293 LRSAM1Q6UWE0 723 aa23.04■■□□□ 1.28
TREX1-205ENST00000625293 MTA3Q9BTC8 594 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms