RNA–Protein interactions for RNA: ENST00000624160.1

AC004009.3-201, humanhuman

BASIC

Gene AC004009.3, Length 645 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.3-201ENST00000624160 CFAP99D6REC4 459 aa10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 RFX5P48382 616 aaPredicted RBP10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 HDAC1Q13547 482 aaPredicted RBP10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 PUM3Q15397 648 aaKnown RBP10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 PUS10Q3MIT2 529 aaKnown RBP10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 RETREG3Q86VR2 466 aa10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 PNMA1Q8ND90 353 aa10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 C7orf43Q8WVR3 580 aa10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 SYMPKQ92797 1274 aaKnown RBP10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 GCC1Q96CN9 775 aa10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 ZNF594Q96JF6 807 aaPredicted RBP10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 ZC3H12CQ9C0D7 883 aaKnown RBP10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 HPS5Q9UPZ3 1129 aa10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.78
AC004009.3-201ENST00000624160 LRRC37AA6NMS7 1700 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 UFL1O94874 794 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 PDE8BO95263 885 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 IFIT1P09914 478 aaKnown RBP10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 SLC5A1P13866 664 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 UBE4AQ14139 1066 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 WASHC4Q2M389 1173 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 CAVIN4Q5BKX8 364 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 MORN1Q5T089 497 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 VPS37DQ86XT2 251 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 KLHDC4Q8TBB5 520 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 JDP2Q8WYK2 163 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 KIF1BPQ96EK5 621 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 RTFDC1Q9BY42 306 aaPredicted RBP10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 RIPOR2Q9Y4F9 1068 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 SLX4Q8IY92 1834 aa10.14□□□□□ -0.79
AC004009.3-201ENST00000624160 ZNF804BA4D1E1 1349 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 CACNA1SQ13698 1873 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 POTEB3A0JP26 581 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 LMNB1P20700 586 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 GPSM2P81274 684 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 POTEBQ6S5H4 581 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 ZNF804AQ7Z570 1209 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 CLASRPQ8N2M8 674 aaKnown RBP10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 LPIN2Q92539 896 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 WNT2BQ93097 391 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 LRRCC1Q9C099 1032 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 PLSCR2Q9NRY7 297 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 PA2G4Q9UQ80 394 aaKnown RBP10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 SLC27A5Q9Y2P5 690 aa10.13□□□□□ -0.79
AC004009.3-201ENST00000624160 ZC3H4Q9UPT8 1303 aaKnown RBP10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 SOWAHBA6NEL2 793 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 PPIP5K2O43314 1243 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 NR1I2O75469 434 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 YBX3P16989 372 aaKnown RBP eCLIP10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 ATP2B3Q16720 1220 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 LRRC24Q50LG9 513 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 GORABQ5T7V8 394 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 NIM1KQ8IY84 436 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 LARGE2Q8N3Y3 721 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 TBC1D16Q8TBP0 767 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 LRRN4Q8WUT4 740 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 PUS3Q9BZE2 481 aaKnown RBP10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 DCTPP1Q9H773 170 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 GPR108Q9NPR9 543 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 GNL3LQ9NVN8 582 aaKnown RBP10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 EXOC6BQ9Y2D4 811 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 MED23Q9ULK4 1368 aa10.12□□□□□ -0.79
AC004009.3-201ENST00000624160 HRO43593 1189 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 TAF5LO75529 589 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 IFIT2P09913 472 aaKnown RBP10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 IARSP41252 1262 aaKnown RBP10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 KIAA2012Q0VF49 1180 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 C15orf52Q6ZUT6 534 aaKnown RBP10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 ATG9AQ7Z3C6 839 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 SIRT2Q8IXJ6 389 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 RHPN1Q8TCX5 695 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 GPATCH3Q96I76 525 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 CCDC136Q96JN2 1154 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 PCDHB3Q9Y5E6 796 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 SPEF2Q9C093 1822 aa10.11□□□□□ -0.79
AC004009.3-201ENST00000624160 FRAT2O75474 233 aaPredicted RBP10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 BCAMP50895 628 aa10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 TFCP2Q12800 502 aa10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 CCDC158Q5M9N0 1113 aa10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 PODNQ7Z5L7 613 aa10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 VGLL2Q8N8G2 317 aa10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 NEUROD6Q96NK8 337 aa10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 COA1Q9GZY4 146 aa10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 HMX1Q9NP08 348 aaPredicted RBP10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 POLLQ9UGP5 575 aa10.1□□□□□ -0.79
AC004009.3-201ENST00000624160 TAF1P21675 1872 aa10.09□□□□□ -0.79
AC004009.3-201ENST00000624160 A0A1B0GUL7 405 aa10.09□□□□□ -0.79
AC004009.3-201ENST00000624160 NFKBIEO00221 500 aa10.09□□□□□ -0.79
AC004009.3-201ENST00000624160 EIF6P56537 245 aaKnown RBP10.09□□□□□ -0.79
AC004009.3-201ENST00000624160 AOC3Q16853 763 aa10.09□□□□□ -0.79
AC004009.3-201ENST00000624160 OLFM4Q6UX06 510 aa10.09□□□□□ -0.79
AC004009.3-201ENST00000624160 ZNF277Q9NRM2 450 aaPredicted RBP10.09□□□□□ -0.79
AC004009.3-201ENST00000624160 RNF181Q9P0P0 153 aa10.09□□□□□ -0.79
AC004009.3-201ENST00000624160 FER1L6Q2WGJ9 1857 aa10.08□□□□□ -0.8
AC004009.3-201ENST00000624160 SNED1Q8TER0 1413 aa10.08□□□□□ -0.8
AC004009.3-201ENST00000624160 SASH1O94885 1247 aa10.08□□□□□ -0.8
AC004009.3-201ENST00000624160 FMNL1O95466 1100 aaPredicted RBP10.08□□□□□ -0.8
AC004009.3-201ENST00000624160 UQCRFS1P1P0C7P4 283 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms