RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 KIF23Q02241 960 aaPredicted RBP9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 SYNE3Q6ZMZ3 975 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 PLA2G4DQ86XP0 818 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 IGDCC4Q8TDY8 1250 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 SMARCC1Q92922 1105 aaPredicted RBP9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 ARMT1Q9H993 441 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 EPB41L4AQ9HCS5 686 aaPredicted RBP9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 CLIC4Q9Y696 253 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 SPTLC2O15270 562 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 ZBTB43O43298 467 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 GNAT2P19087 354 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 BCAMP50895 628 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 ZNF75DP51815 510 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 CHRNDQ07001 517 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 TMEM67Q5HYA8 995 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 NFXL1Q6ZNB6 911 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 BARGINQ6ZT62 677 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 SGMS1Q86VZ5 419 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 FMR1NBQ8N0W7 255 aaPredicted RBP9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 C8orf37Q96NL8 207 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 ALG1Q9BT22 464 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 TRIM5Q9C035 493 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 KCNF1Q9H3M0 494 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 CNNM2Q9H8M5 875 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 LY9Q9HBG7 655 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 GJB4Q9NTQ9 266 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 SPTLC3Q9NUV7 552 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 PNPLA7Q6ZV29 1317 aa9.68□□□□□ -0.86
SND1-IT1-201ENST00000623342 GSG1L2A8MUP6 293 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 KIF28PB7ZC32 967 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 GOLGA6L19H0YKK7 550 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 LIFRP42702 1097 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 IQCB1Q15051 598 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 FAM98CQ17RN3 349 aaKnown RBP9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 DNTTIP2Q5QJE6 756 aaKnown RBP9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 MICU3Q86XE3 530 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 CDC5LQ99459 802 aaKnown RBP9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 NACAP1Q9BZK3 213 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 KRT23Q9C075 422 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 SENP2Q9HC62 589 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 ANO10Q9NW15 660 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 TIAM2Q8IVF5 1701 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 RXRAP19793 462 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 CDC27P30260 824 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 CTDSPL2Q05D32 466 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 AKNAD1Q5T1N1 836 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 ANO1Q5XXA6 986 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 CLEC4GQ6UXB4 293 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 C11orf57Q6ZUT1 292 aaPredicted RBP9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 KIAA1524Q8TCG1 905 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 ZSWIM5Q9P217 1185 aa9.67□□□□□ -0.86
SND1-IT1-201ENST00000623342 A0A1B0GVL5 298 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 GOLGA8AA7E2F4 631 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 IFIT3O14879 490 aaKnown RBP9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 IARSP41252 1262 aaKnown RBP9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 TDO2P48775 406 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 NDUFA8P51970 172 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 NTRK3Q16288 839 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 MFSD6Q6ZSS7 791 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 DRC7Q8IY82 874 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 LCORLQ8N3X6 602 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 INCENPQ9NQS7 918 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 LRP2BPQ9P2M1 347 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 SLC12A7Q9Y666 1083 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 SLC4A4Q9Y6R1 1079 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 BCORQ6W2J9 1755 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 UQCRHLA0A096LP55 91 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 CCDC69A6NI79 296 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 PRKAB2O43741 272 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 UQCRHP07919 91 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 CDC25BP30305 580 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 KRT40Q6A162 431 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 SARM1Q6SZW1 724 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 CCDC144CPQ8IYA2 1237 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 C17orf53Q8N3J3 647 aaPredicted RBP9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 STAG1Q8WVM7 1258 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 PHKBQ93100 1093 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 AIFM3Q96NN9 605 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 SDF4Q9BRK5 362 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 BCL9LQ86UU0 1499 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 COL5A3P25940 1745 aaPredicted RBP9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 CHD4Q14839 1912 aa9.66□□□□□ -0.86
SND1-IT1-201ENST00000623342 PTGS1P23219 599 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 TRIM29Q14134 588 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 CCDC186Q7Z3E2 898 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 VPS37DQ86XT2 251 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 CEP57L1Q8IYX8 460 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 NAT10Q9H0A0 1025 aaKnown RBP9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 FAM217BQ9NTX9 383 aaPredicted RBP9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 PYCARDQ9ULZ3 195 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 TACC3Q9Y6A5 838 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 STK36Q9NRP7 1315 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 NID2Q14112 1375 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 BECN2A8MW95 431 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 RANBP6O60518 1105 aaKnown RBP9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 CMA1P23946 247 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 GNL2Q13823 731 aaKnown RBP9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 SART3Q15020 963 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms