RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 NUDCQ9Y266 331 aa6.56□□□□□ -1.36
RPRD1B-209ENST00000622494 MYBBP1AQ9BQG0 1328 aaKnown RBP6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 LAMB2P55268 1798 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 FAM196BA6NMK8 535 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 CCER2I3L3R5 266 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 INHAP05111 366 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 SERPINB2P05120 415 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 MYL6BP14649 208 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 GPC1P35052 558 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 CTSOP43234 321 aaPredicted RBP6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 RNF144AP50876 292 aaPredicted RBP6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 ATP1A2P50993 1020 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 PRR5LQ6MZQ0 368 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 ARHGAP27Q6ZUM4 889 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 C2CD5Q86YS7 1000 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 SIX5Q8N196 739 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 LARGE2Q8N3Y3 721 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 OGFOD1Q8N543 542 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 RTF1Q92541 710 aaKnown RBP6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 INSM2Q96T92 566 aaPredicted RBP6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 ESYT1Q9BSJ8 1104 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 VRTNQ9H8Y1 702 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 ADAMTS8Q9UP79 889 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 ABCC12Q96J65 1359 aa6.55□□□□□ -1.36
RPRD1B-209ENST00000622494 STAU1O95793 577 aaKnown RBP6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 GPTP24298 496 aa6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 TMPOP42166 694 aaKnown RBP6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 GDF10P55107 478 aa6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 RIPK4P57078 832 aa6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 EIF4A1P60842 406 aaKnown RBP6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 PTK7Q13308 1070 aa6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 TAF7Q15545 349 aaPredicted RBP6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 CRTC2Q53ET0 693 aaPredicted RBP6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 RNF217Q8TC41 542 aa6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 RAB6BQ9NRW1 208 aa6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 DNAAF2Q9NVR5 837 aaKnown RBP6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 LAS1LQ9Y4W2 734 aaKnown RBP6.54□□□□□ -1.36
RPRD1B-209ENST00000622494 COL4A5P29400 1685 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 TTLL8A6PVC2 850 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 NFKBIEO00221 500 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 STARD3NLO95772 234 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 SNRPBP14678 240 aaKnown RBP6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 C9orf131Q5VYM1 1079 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 SYNE4Q8N205 404 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 PNISRQ8TF01 805 aaKnown RBP6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 CNKSR1Q969H4 720 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 PBXIP1Q96AQ6 731 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 GRIP2Q9C0E4 1043 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 NMRK2Q9NPI5 230 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 DNMT3LQ9UJW3 386 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 ARFGEF2Q9Y6D5 1785 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 FER1L6Q2WGJ9 1857 aa6.53□□□□□ -1.36
RPRD1B-209ENST00000622494 UBN2Q6ZU65 1347 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 MAPK8IP3Q9UPT6 1336 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 ANKRD36CQ5JPF3 1778 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L15C9J2P7 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L10C9JJH3 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L13C9JLJ4 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L12C9JPN9 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L11C9JVI0 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L21D6R901 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L18D6R9N7 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L22D6RA61 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L17D6RBQ6 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L19D6RCP7 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L20D6RJB6 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 M0R2N6 131 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 MEN1O00255 615 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 TCERG1O14776 1098 aaKnown RBP6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 SNRPA1P09661 255 aaKnown RBP6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 EIF2S2P20042 333 aaKnown RBP6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 RASA1P20936 1047 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 RFX1P22670 979 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 IL6STP40189 918 aaPredicted RBP6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 HTRA3P83110 453 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 USP17L24Q0WX57 530 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 ELOAQ14241 798 aaKnown RBP6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 MTFR1Q15390 333 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 DALRD3Q5D0E6 543 aaKnown RBP6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 CCDC102BQ68D86 513 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 LRP10Q7Z4F1 713 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 ZNF622Q969S3 477 aaKnown RBP eCLIP6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 MRS2Q9HD23 443 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 POLMQ9NP87 494 aaPredicted RBP6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 ZNF358Q9NW07 568 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 TSPYL4Q9UJ04 414 aa6.52□□□□□ -1.37
RPRD1B-209ENST00000622494 SPATA31C2B4DYI2 1134 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 APAF1O14727 1248 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 C21orf2O43822 256 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 GRIN3BO60391 1043 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 ATG7O95352 703 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 EPHA4P54764 986 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 C1QTNF8P60827 252 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 TGFB2P61812 414 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 CENPCQ03188 943 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 TPCN2Q8NHX9 752 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 NLRP3Q96P20 1036 aa6.51□□□□□ -1.37
RPRD1B-209ENST00000622494 RNF181Q9P0P0 153 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms