RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 C9orf78Q9NZ63 289 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-209ENST00000620502 GLTPD2A6NH11 291 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 FZD9O00144 591 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 GDF9O60383 454 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 ITGA6P23229 1130 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 LMBR1LQ6UX01 489 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 DPP8Q6V1X1 898 aaPredicted RBP8.22□□□□□ -1.09
BRCC3-209ENST00000620502 ANKRD18AQ8IVF6 992 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 SUCLG2Q96I99 432 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 UNC93B1Q9H1C4 597 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 TMX4Q9H1E5 349 aaPredicted RBP8.22□□□□□ -1.09
BRCC3-209ENST00000620502 VPS33BQ9H267 617 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 NMRK2Q9NPI5 230 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 MAP10Q9P2G4 905 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 POLLQ9UGP5 575 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 NSFL1CQ9UNZ2 370 aaKnown RBP8.22□□□□□ -1.09
BRCC3-209ENST00000620502 TNNQ9UQP3 1299 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 KIF16BQ96L93 1317 aa8.22□□□□□ -1.09
BRCC3-209ENST00000620502 WDR90Q96KV7 1748 aa8.21□□□□□ -1.09
BRCC3-209ENST00000620502 WTIPA6NIX2 430 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-209ENST00000620502 POTECB2RU33 542 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 TRIM27P14373 513 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 CCT4P50991 539 aaKnown RBP8.21□□□□□ -1.1
BRCC3-209ENST00000620502 SKOR1P84550 965 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 AOC3Q16853 763 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 INTS3Q68E01 1043 aaKnown RBP8.21□□□□□ -1.1
BRCC3-209ENST00000620502 SUPT20HQ8NEM7 779 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 TBC1D16Q8TBP0 767 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 CDC5LQ99459 802 aaKnown RBP8.21□□□□□ -1.1
BRCC3-209ENST00000620502 IRX2Q9BZI1 471 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-209ENST00000620502 RRAGCQ9HB90 399 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 BSDC1Q9NW68 430 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-209ENST00000620502 PKD2L1Q9P0L9 805 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 MINPP1Q9UNW1 487 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 KDM2BQ8NHM5 1336 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 ZNF541Q9H0D2 1346 aa8.21□□□□□ -1.1
BRCC3-209ENST00000620502 ANKRD18BA2A2Z9 1011 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 IPO8O15397 1037 aaKnown RBP8.2□□□□□ -1.1
BRCC3-209ENST00000620502 PPIP5K2O43314 1243 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 AP1G2O75843 785 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 DDNO94850 711 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-209ENST00000620502 CTHP32929 405 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 PRR20EP86478 221 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 PRR20CP86479 221 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 PRR20DP86480 221 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 PRR20BP86481 221 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 PRR20AP86496 221 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 KIAA2012Q0VF49 1180 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 IFIT5Q13325 482 aaKnown RBP8.2□□□□□ -1.1
BRCC3-209ENST00000620502 RABL6Q3YEC7 729 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-209ENST00000620502 ATF7IPQ6VMQ6 1270 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 LARGE2Q8N3Y3 721 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 ANKRD44Q8N8A2 993 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 LRRN4Q8WUT4 740 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 JDP2Q8WYK2 163 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 FRAT1Q92837 279 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-209ENST00000620502 BICC1Q9H694 974 aaKnown RBP8.2□□□□□ -1.1
BRCC3-209ENST00000620502 A0A1B0GUL6 1792 aa8.2□□□□□ -1.1
BRCC3-209ENST00000620502 IGHMBP2P38935 993 aaKnown RBP8.19□□□□□ -1.1
BRCC3-209ENST00000620502 WNT7BP56706 349 aa8.19□□□□□ -1.1
BRCC3-209ENST00000620502 WASHC4Q2M389 1173 aa8.19□□□□□ -1.1
BRCC3-209ENST00000620502 TMEM259Q4ZIN3 620 aa8.19□□□□□ -1.1
BRCC3-209ENST00000620502 ZKSCAN2Q63HK3 967 aa8.19□□□□□ -1.1
BRCC3-209ENST00000620502 ZNF594Q96JF6 807 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-209ENST00000620502 GPR101Q96P66 508 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-209ENST00000620502 ANKIB1Q9P2G1 1089 aa8.19□□□□□ -1.1
BRCC3-209ENST00000620502 XDHP47989 1333 aa8.19□□□□□ -1.1
BRCC3-209ENST00000620502 YDJCA8MPS7 323 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 WNT7AO00755 349 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 GFRA3O60609 400 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 USP17L8P0C7I0 530 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 VEGFAP15692 232 aaPredicted RBP8.18□□□□□ -1.1
BRCC3-209ENST00000620502 ATP2B4P23634 1241 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 CCDC57Q2TAC2 916 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 NIM1KQ8IY84 436 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 GPC2Q8N158 579 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 BAP1Q92560 729 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 CLUAP1Q96AJ1 413 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 MPHOSPH8Q99549 860 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 MEIS3Q99687 375 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 GGA1Q9UJY5 639 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 ZNRF3Q9ULT6 936 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 CHMP3Q9Y3E7 222 aa8.18□□□□□ -1.1
BRCC3-209ENST00000620502 SCN4AP35499 1836 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 NRG2O14511 850 aaPredicted RBP8.17□□□□□ -1.1
BRCC3-209ENST00000620502 TOMM70O94826 608 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 UFL1O94874 794 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 UBTFL1P0CB47 393 aaPredicted RBP8.17□□□□□ -1.1
BRCC3-209ENST00000620502 RLBP1P12271 317 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 RFX5P48382 616 aaPredicted RBP8.17□□□□□ -1.1
BRCC3-209ENST00000620502 EIF6P56537 245 aaKnown RBP8.17□□□□□ -1.1
BRCC3-209ENST00000620502 C1QTNF8P60827 252 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 SH3BP2P78314 561 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 CHRNDQ07001 517 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 CXCL9Q07325 125 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 FOXC1Q12948 553 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 LAPTM4AQ15012 233 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 LDHAL6AQ6ZMR3 332 aa8.17□□□□□ -1.1
BRCC3-209ENST00000620502 TMEM57Q8N5G2 664 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms