RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 VGLL4Q14135 290 aa11.95□□□□□ -0.5
TARDBP-218ENST00000617172 DIXDC1Q155Q3 683 aa11.95□□□□□ -0.5
TARDBP-218ENST00000617172 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
TARDBP-218ENST00000617172 ERO1BQ86YB8 467 aa11.95□□□□□ -0.5
TARDBP-218ENST00000617172 TMEM57Q8N5G2 664 aa11.95□□□□□ -0.5
TARDBP-218ENST00000617172 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
TARDBP-218ENST00000617172 MS4A4AQ96JQ5 239 aa11.95□□□□□ -0.5
TARDBP-218ENST00000617172 NEUROD6Q96NK8 337 aa11.95□□□□□ -0.5
TARDBP-218ENST00000617172 USP40Q9NVE5 1235 aa11.95□□□□□ -0.5
TARDBP-218ENST00000617172 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-218ENST00000617172 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
TARDBP-218ENST00000617172 IGF2BP3O00425 579 aaKnown RBP eCLIP11.94□□□□□ -0.5
TARDBP-218ENST00000617172 WDHD1O75717 1129 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-218ENST00000617172 ADORA1P30542 326 aa11.94□□□□□ -0.5
TARDBP-218ENST00000617172 GJA5P36382 358 aa11.94□□□□□ -0.5
TARDBP-218ENST00000617172 MLLT1Q03111 559 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-218ENST00000617172 RASGRF1Q13972 1273 aa11.94□□□□□ -0.5
TARDBP-218ENST00000617172 DZIP1Q86YF9 867 aaKnown RBP11.94□□□□□ -0.5
TARDBP-218ENST00000617172 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
TARDBP-218ENST00000617172 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
TARDBP-218ENST00000617172 ZNF341Q9BYN7 854 aa11.94□□□□□ -0.5
TARDBP-218ENST00000617172 ABCF2Q9UG63 623 aa11.94□□□□□ -0.5
TARDBP-218ENST00000617172 ECM29Q5VYK3 1845 aa11.94□□□□□ -0.5
TARDBP-218ENST00000617172 PNMA6EA0A0J9YXQ4 647 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 SPDYE5A6NIY4 337 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 UQCRFS1P1P0C7P4 283 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 CETPP11597 493 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 ATP8B2P98198 1209 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 TCP10Q12799 353 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 ARHGEF6Q15052 776 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 FBXO46Q6PJ61 603 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-218ENST00000617172 ERICH6Q7L0X2 663 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 SSH3Q8TE77 659 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 PTPN18Q99952 460 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 IDI2Q9BXS1 227 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 R3HDMLQ9H3Y0 253 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 GPR108Q9NPR9 543 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 TNNQ9UQP3 1299 aa11.93□□□□□ -0.5
TARDBP-218ENST00000617172 GAKO14976 1311 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 CCL15-CCL14A0A0B4J2E2 113 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
TARDBP-218ENST00000617172 ENTPD3O75355 529 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
TARDBP-218ENST00000617172 LDHCP07864 332 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 MS4A1P11836 297 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 GSTO1P78417 241 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 PPATQ06203 517 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 SNAPC2Q13487 334 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 POLA2Q14181 598 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 CCL15Q16663 113 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 MIGA2Q7L4E1 593 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 ITPRIPQ8IWB1 547 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 SPATA5Q8NB90 893 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 ERO1AQ96HE7 468 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 ZFYVE28Q9HCC9 887 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 ZCCHC17Q9NP64 241 aaKnown RBP11.92□□□□□ -0.5
TARDBP-218ENST00000617172 ZNF112Q9UJU3 913 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
TARDBP-218ENST00000617172 ARAP2Q8WZ64 1704 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 IGSF3O75054 1194 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 ARID4AP29374 1257 aaPredicted RBP11.91□□□□□ -0.5
TARDBP-218ENST00000617172 SP3Q02447 781 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 NFIAQ12857 509 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 CRHR2Q13324 411 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 PPIL2Q13356 520 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 OS9Q13438 667 aaPredicted RBP11.91□□□□□ -0.5
TARDBP-218ENST00000617172 CCDC158Q5M9N0 1113 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 POTEDQ86YR6 584 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 ZKSCAN4Q969J2 545 aaPredicted RBP11.91□□□□□ -0.5
TARDBP-218ENST00000617172 HMG20BQ9P0W2 317 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 SNCAIPQ9Y6H5 919 aa11.91□□□□□ -0.5
TARDBP-218ENST00000617172 GPR75-ASB3A0A0A6YYF3 556 aa11.9□□□□□ -0.5
TARDBP-218ENST00000617172 IRF6O14896 467 aa11.9□□□□□ -0.5
TARDBP-218ENST00000617172 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
TARDBP-218ENST00000617172 SURF6O75683 361 aaKnown RBP11.9□□□□□ -0.5
TARDBP-218ENST00000617172 MECOMQ03112 1051 aa11.9□□□□□ -0.5
TARDBP-218ENST00000617172 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
TARDBP-218ENST00000617172 NOP58Q9Y2X3 529 aaKnown RBP11.9□□□□□ -0.5
TARDBP-218ENST00000617172 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
TARDBP-218ENST00000617172 RGS3P49796 1198 aa11.89□□□□□ -0.51
TARDBP-218ENST00000617172 MAP3K10Q02779 954 aa11.89□□□□□ -0.51
TARDBP-218ENST00000617172 TAF1CQ15572 869 aaPredicted RBP11.89□□□□□ -0.51
TARDBP-218ENST00000617172 TNNI3KQ59H18 835 aa11.89□□□□□ -0.51
TARDBP-218ENST00000617172 NOL9Q5SY16 702 aaKnown RBP11.89□□□□□ -0.51
TARDBP-218ENST00000617172 ZSCAN29Q8IWY8 852 aaPredicted RBP11.89□□□□□ -0.51
TARDBP-218ENST00000617172 ZNF512BQ96KM6 892 aaPredicted RBP11.89□□□□□ -0.51
TARDBP-218ENST00000617172 LRP2BPQ9P2M1 347 aa11.89□□□□□ -0.51
TARDBP-218ENST00000617172 TRIM17Q9Y577 477 aa11.89□□□□□ -0.51
TARDBP-218ENST00000617172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.89□□□□□ -0.51
TARDBP-218ENST00000617172 FPGT-TNNI3KV9GXZ4 949 aa11.89□□□□□ -0.51
TARDBP-218ENST00000617172 RLBP1P12271 317 aa11.88□□□□□ -0.51
TARDBP-218ENST00000617172 INPP5BP32019 993 aa11.88□□□□□ -0.51
TARDBP-218ENST00000617172 BTDP43251 543 aa11.88□□□□□ -0.51
TARDBP-218ENST00000617172 TTC39AQ5SRH9 613 aa11.88□□□□□ -0.51
TARDBP-218ENST00000617172 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
TARDBP-218ENST00000617172 OTOP1Q7RTM1 612 aa11.88□□□□□ -0.51
TARDBP-218ENST00000617172 FAM43AQ8N2R8 423 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms