RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PPP2R3AQ06190 1150 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 HAUS3Q68CZ6 603 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 OTUD6BQ8N6M0 293 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 RBM17Q96I25 401 aaKnown RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 NAPGQ99747 312 aaPredicted RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 ATP6V0A2Q9Y487 856 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 ZNF622Q969S3 477 aaKnown RBP eCLIP5.13□□□□□ -1.596e-7■■■□□ 18.6
CHD9-221ENST00000615216 PLCB1Q9NQ66 1216 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 TXNDC16Q9P2K2 825 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 ODF2LQ9ULJ1 636 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 UTP11Q9Y3A2 253 aaKnown RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 MAST3O60307 1309 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 PTPRKQ15262 1439 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 TMEM110-MUSTN1A8MSY1 372 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 CUTAO60888 179 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 PTGS1P23219 599 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 SMTNP53814 917 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 LACTBP83111 547 aaPredicted RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 PUM3Q15397 648 aaKnown RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 ZNF569Q5MCW4 686 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 C8orf58Q8NAV2 365 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 ATRIPQ8WXE1 791 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 LRRC2Q9BYS8 371 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 BICC1Q9H694 974 aaKnown RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 GUCA1BQ9UMX6 200 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 EXOC7Q9UPT5 735 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 IBTKQ9P2D0 1353 aaPredicted RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 CALCOCO2Q13137 446 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 WDR44Q5JSH3 913 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 FYB2Q5VWT5 728 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 GABPB2Q8TAK5 448 aaPredicted RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 TRIM7Q9C029 511 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 VPS18Q9P253 973 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 STK10O94804 968 aaKnown RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 LMOD1P29536 600 aaPredicted RBP5.13□□□□□ -1.59
CHD9-221ENST00000615216 CAPZA3Q96KX2 299 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 NKIRAS1Q9NYS0 192 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 FAM184BQ9ULE4 1060 aa5.13□□□□□ -1.59
CHD9-221ENST00000615216 APOBRQ0VD83 1088 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 TFCP2Q12800 502 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 LIN9Q5TKA1 542 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 LMBR1LQ6UX01 489 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 CDAN1Q8IWY9 1227 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 AFAP1L1Q8TED9 768 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 HAUS2Q9NVX0 235 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 STIM2Q9P246 746 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 NIP7Q9Y221 180 aaKnown RBP eCLIP5.12□□□□□ -1.59
CHD9-221ENST00000615216 TNNI2P48788 182 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 CFAP157Q5JU67 520 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 CCDC63Q8NA47 563 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 RSRC1Q96IZ7 334 aaKnown RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 CDCA7Q9BWT1 371 aaPredicted RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 ATP11AP98196 1134 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 CPLX4Q7Z7G2 160 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 IFT20Q8IY31 132 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 SYCE1Q8N0S2 351 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 AFAP1L2Q8N4X5 818 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 CLSTN2Q9H4D0 955 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 ACTN4O43707 911 aaKnown RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 GBP1P32455 592 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 CCDC122Q5T0U0 273 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 DZIP3Q86Y13 1208 aaKnown RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 POTEDQ86YR6 584 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 NOX5Q96PH1 765 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 TET3O43151 1660 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 GPATCH11Q8N954 259 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 CCDC114Q96M63 670 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 MCM9Q9NXL9 1143 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 LAMC1P11047 1609 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 DKC1O60832 514 aaKnown RBP eCLIP5.12□□□□□ -1.592e-6■■■□□ 16.1
CHD9-221ENST00000615216 TPTE2Q6XPS3 522 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 SKAP1Q86WV1 359 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 IRS4O14654 1257 aaPredicted RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 STX10O60499 249 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 GMNNO75496 209 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 PPM1FP49593 454 aaPredicted RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 SIRT1Q96EB6 747 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 ZRANB1Q9UGI0 708 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.12□□□□□ -1.593e-6■■□□□ 12.1
CHD9-221ENST00000615216 VAMP4O75379 141 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 ARID4AP29374 1257 aaPredicted RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 MAP3K9P80192 1104 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 ASIC2Q16515 512 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 ZNF830Q96NB3 372 aaPredicted RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 NUCKS1Q9H1E3 243 aaKnown RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 PODXL2Q9NZ53 605 aa5.12□□□□□ -1.59
CHD9-221ENST00000615216 MKRN1Q9UHC7 482 aaKnown RBP5.12□□□□□ -1.59
CHD9-221ENST00000615216 ZFYVE16Q7Z3T8 1539 aa5.11□□□□□ -1.59
CHD9-221ENST00000615216 RNMTO43148 476 aaKnown RBP5.11□□□□□ -1.59
CHD9-221ENST00000615216 GIGYF1O75420 1035 aaPredicted RBP5.11□□□□□ -1.59
CHD9-221ENST00000615216 ARID5AQ03989 594 aa5.11□□□□□ -1.59
CHD9-221ENST00000615216 ANO1Q5XXA6 986 aa5.11□□□□□ -1.59
CHD9-221ENST00000615216 INTS8Q75QN2 995 aaKnown RBP5.11□□□□□ -1.59
CHD9-221ENST00000615216 TAOK1Q7L7X3 1001 aa5.11□□□□□ -1.59
CHD9-221ENST00000615216 UBLCP1Q8WVY7 318 aaPredicted RBP5.11□□□□□ -1.59
CHD9-221ENST00000615216 SEC62Q99442 399 aaKnown RBP5.11□□□□□ -1.59
CHD9-221ENST00000615216 MTMR3Q13615 1198 aa5.11□□□□□ -1.59
CHD9-221ENST00000615216 SLC4A8Q2Y0W8 1093 aa5.11□□□□□ -1.59
CHD9-221ENST00000615216 HOOK2Q96ED9 719 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms