RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 LOC102724428A0A0B4J2F2 783 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SIK1P57059 783 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 PTPN21Q16825 1174 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SYNE4Q8N205 404 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 PIH1D3Q9NQM4 214 aaKnown RBP12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 PATL2C9JE40 543 aaKnown RBP12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 H3BQV1 296 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 LIFRP42702 1097 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SF3B3Q15393 1217 aaKnown RBP12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SLFNL1Q499Z3 407 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CCDC152Q4G0S7 254 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 IFFO2Q5TF58 517 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ILDR1Q86SU0 546 aaPredicted RBP12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ENGASEQ8NFI3 743 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 MRVI1Q9Y6F6 885 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 PDE6AP16499 860 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 GTF2F1P35269 517 aaKnown RBP eCLIP12.62□□□□□ -0.391e-12■■■□□ 17.1
SENP3-EIF4A1-201ENST00000614237 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 A0A0G2JLW4 131 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 PRC1O43663 620 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ELF2Q15723 593 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 RC3H1Q5TC82 1133 aaKnown RBP12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 TTLL5Q6EMB2 1281 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SPATA5Q8NB90 893 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CLIP2Q9UDT6 1046 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 YEATS4O95619 227 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ISM2Q6H9L7 571 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CCAR2Q8N163 923 aaKnown RBP12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 TDRD7Q8NHU6 1098 aaKnown RBP12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CACNA1SQ13698 1873 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SH2B2O14492 632 aaPredicted RBP12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 FBXO18Q8NFZ0 1043 aa12.61□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 GPTP24298 496 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 NT5C2P49902 561 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ITPK1Q13572 414 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SNW1Q13573 536 aaKnown RBP12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 WASHC4Q2M389 1173 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SLC9C2Q5TAH2 1124 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 UTP14CQ5TAP6 766 aaKnown RBP12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CNNM2Q9H8M5 875 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ANAPC4Q9UJX5 808 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ZNF215Q9UL58 517 aaPredicted RBP12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ANGEL1Q9UNK9 670 aaKnown RBP12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 BECN2A8MW95 431 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 GOLGA6L19H0YKK7 550 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CDC25BP30305 580 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 TYRO3Q06418 890 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ELOA2Q8IYF1 753 aaPredicted RBP12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 IGDCC4Q8TDY8 1250 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 LRRC2Q9BYS8 371 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 PHKA1P46020 1223 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 GUCY1B3Q02153 619 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ADALQ6DHV7 355 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 STK11IPQ8N1F8 1099 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 TAF1LQ8IZX4 1826 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CDKL5O76039 1030 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 KIF20AO95235 890 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SARM1Q6SZW1 724 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SPTLC3Q9NUV7 552 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 TNNT3P45378 269 aaPredicted RBP12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 MAP3K12Q12852 859 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ZNF165P49910 485 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 LAMB1P07942 1786 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 SEMA3EO15041 775 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 BPIFA3Q9BQP9 254 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 CBX8Q9HC52 389 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 COL4A1P02462 1669 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 NR1I2O75469 434 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 FGRP09769 529 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 PCP11498 1178 aaKnown RBP12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 FAM160A1Q05DH4 1040 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 UBE4AQ14139 1066 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 VPS72Q15906 364 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 CEP135Q66GS9 1140 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 KCNG4Q8TDN1 519 aa12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 CACTINQ8WUQ7 758 aaKnown RBP12.58□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 BTAF1O14981 1849 aa12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 TRDNQ13061 729 aa12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 GNL2Q13823 731 aaKnown RBP12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 PPP2R5BQ15173 497 aa12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 NTRK3Q16288 839 aa12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 HSP90AA4PQ58FG1 418 aa12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 PLA2G4DQ86XP0 818 aa12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 HOMER1Q86YM7 354 aa12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 TBC1D10CQ8IV04 446 aa12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 KRT23Q9C075 422 aa12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 BSDC1Q9NW68 430 aaPredicted RBP12.57□□□□□ -0.4
SENP3-EIF4A1-201ENST00000614237 DUOX1Q9NRD9 1551 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms