RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 NAP1L5Q96NT1 182 aaPredicted RBP21.03■□□□□ 0.96
SEMA6C-209ENST00000613223 CNNM2Q9H8M5 875 aa21.03■□□□□ 0.96
SEMA6C-209ENST00000613223 LEMD3Q9Y2U8 911 aa21.03■□□□□ 0.96
SEMA6C-209ENST00000613223 B4E1Z4 1266 aa21.02■□□□□ 0.96
SEMA6C-209ENST00000613223 NAA16Q6N069 864 aaPredicted RBP21.02■□□□□ 0.96
SEMA6C-209ENST00000613223 TMEM87BQ96K49 555 aa21.02■□□□□ 0.96
SEMA6C-209ENST00000613223 RIOK1Q9BRS2 568 aaKnown RBP21.02■□□□□ 0.96
SEMA6C-209ENST00000613223 HPS5Q9UPZ3 1129 aa21.02■□□□□ 0.96
SEMA6C-209ENST00000613223 XDHP47989 1333 aa21.02■□□□□ 0.95
SEMA6C-209ENST00000613223 SH2B2O14492 632 aaPredicted RBP21.01■□□□□ 0.95
SEMA6C-209ENST00000613223 AKNAD1Q5T1N1 836 aa21.01■□□□□ 0.95
SEMA6C-209ENST00000613223 ANKIB1Q9P2G1 1089 aa21.01■□□□□ 0.95
SEMA6C-209ENST00000613223 MAST2Q6P0Q8 1798 aa21.01■□□□□ 0.95
SEMA6C-209ENST00000613223 CTDSPL2Q05D32 466 aa21.01■□□□□ 0.95
SEMA6C-209ENST00000613223 TMED8Q6PL24 325 aaPredicted RBP21.01■□□□□ 0.95
SEMA6C-209ENST00000613223 STAG1Q8WVM7 1258 aa21.01■□□□□ 0.95
SEMA6C-209ENST00000613223 KRT23Q9C075 422 aa21.01■□□□□ 0.95
SEMA6C-209ENST00000613223 DDR1Q08345 913 aa21■□□□□ 0.95
SEMA6C-209ENST00000613223 RESTQ13127 1097 aa21■□□□□ 0.95
SEMA6C-209ENST00000613223 TXNRD3Q86VQ6 643 aa21■□□□□ 0.95
SEMA6C-209ENST00000613223 NKX2-3Q8TAU0 364 aa21■□□□□ 0.95
SEMA6C-209ENST00000613223 ZSCAN16Q9H4T2 348 aaPredicted RBP21■□□□□ 0.95
SEMA6C-209ENST00000613223 POLRMTO00411 1230 aaKnown RBP20.99■□□□□ 0.95
SEMA6C-209ENST00000613223 PLSCR1O15162 318 aa20.99■□□□□ 0.95
SEMA6C-209ENST00000613223 MFSD6Q6ZSS7 791 aa20.99■□□□□ 0.95
SEMA6C-209ENST00000613223 ZNF384Q8TF68 577 aa20.99■□□□□ 0.95
SEMA6C-209ENST00000613223 NSUN4Q96CB9 384 aaKnown RBP20.99■□□□□ 0.95
SEMA6C-209ENST00000613223 RBM17Q96I25 401 aaKnown RBP20.99■□□□□ 0.95
SEMA6C-209ENST00000613223 ELP1O95163 1332 aa20.98■□□□□ 0.95
SEMA6C-209ENST00000613223 CHAF1AQ13111 956 aaPredicted RBP20.98■□□□□ 0.95
SEMA6C-209ENST00000613223 RNF41Q9H4P4 317 aaPredicted RBP20.98■□□□□ 0.95
SEMA6C-209ENST00000613223 MECOMQ03112 1051 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 FAM173BQ6P4H8 233 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 C15orf52Q6ZUT6 534 aaKnown RBP20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 IGDCC4Q8TDY8 1250 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 SDR42E1Q8WUS8 393 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 SCAND2PQ9GZW5 306 aaPredicted RBP20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 TACC3Q9Y6A5 838 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 IGSF3O75054 1194 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 KDM4AO75164 1064 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 PPARAQ07869 468 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 SGMS1Q86VZ5 419 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 BRIP1Q9BX63 1249 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 INCENPQ9NQS7 918 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 ANAPC4Q9UJX5 808 aa20.97■□□□□ 0.95
SEMA6C-209ENST00000613223 SYCE3A1L190 88 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 CPLX1O14810 134 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 FDPSP14324 419 aaKnown RBP20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 HOXA10P31260 410 aaPredicted RBP20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 LIFRP42702 1097 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 DYNLL1P63167 89 aaKnown RBP20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 CCDC88AQ3V6T2 1871 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 TMEM67Q5HYA8 995 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 SPTY2D1Q68D10 685 aaPredicted RBP20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 LRSAM1Q6UWE0 723 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 LY9Q9HBG7 655 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 ZSWIM5Q9P217 1185 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 KLRG2A4D1S0 409 aaPredicted RBP20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 ZNF827Q17R98 1081 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 HS1BP3Q53T59 392 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 GIMAP6Q6P9H5 292 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 APOA5Q6Q788 366 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 ZNF804AQ7Z570 1209 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 TTC6Q86TZ1 520 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 SLC51AQ86UW1 340 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 ZSCAN30Q86W11 494 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 AKT1S1Q96B36 256 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 MTA3Q9BTC8 594 aa20.96■□□□□ 0.95
SEMA6C-209ENST00000613223 BBOX1O75936 387 aa20.95■□□□□ 0.94
SEMA6C-209ENST00000613223 PRDX5P30044 214 aa20.95■□□□□ 0.94
SEMA6C-209ENST00000613223 METAP2P50579 478 aaKnown RBP eCLIP20.95■□□□□ 0.94
SEMA6C-209ENST00000613223 KIAA1551Q9HCM1 1747 aa20.95■□□□□ 0.94
SEMA6C-209ENST00000613223 APBA3O96018 575 aa20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 GPSM2P81274 684 aa20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 CCDC183Q5T5S1 534 aa20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 RAB11FIP4Q86YS3 637 aa20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 TDRD7Q8NHU6 1098 aaKnown RBP20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 WDR66Q8TBY9 1149 aa20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 CRAMP1Q96RY5 1269 aa20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 RBSNQ9H1K0 784 aa20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 IFIT3O14879 490 aaKnown RBP20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 ATP2B4P23634 1241 aa20.94■□□□□ 0.94
SEMA6C-209ENST00000613223 MYH15Q9Y2K3 1946 aa20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 ZBTB43O43298 467 aa20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 PPFIA3O75145 1194 aa20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 FOSBP53539 338 aa20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 SART3Q15020 963 aaKnown RBP20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 RRP12Q5JTH9 1297 aaKnown RBP20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 NFXL1Q6ZNB6 911 aa20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 SPATA32Q96LK8 384 aa20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 SENP2Q9HC62 589 aa20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 TOMM22Q9NS69 142 aa20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 ORC3Q9UBD5 711 aaPredicted RBP20.93■□□□□ 0.94
SEMA6C-209ENST00000613223 MINDY4BA8MYZ0 360 aa20.92■□□□□ 0.94
SEMA6C-209ENST00000613223 CDKL5O76039 1030 aa20.92■□□□□ 0.94
SEMA6C-209ENST00000613223 NLGN1Q8N2Q7 840 aa20.92■□□□□ 0.94
SEMA6C-209ENST00000613223 LEO1Q8WVC0 666 aaPredicted RBP20.92■□□□□ 0.94
SEMA6C-209ENST00000613223 CRNKL1Q9BZJ0 848 aaKnown RBP20.92■□□□□ 0.94
SEMA6C-209ENST00000613223 GGA1Q9UJY5 639 aa20.92■□□□□ 0.94
SEMA6C-209ENST00000613223 NRXN2Q9P2S2 1712 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms