RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 BHLHE22Q8NFJ8 381 aaPredicted RBP7.53□□□□□ -1.2
TARDBP-212ENST00000611008 LRRC10BA6NIK2 292 aa7.52□□□□□ -1.21
TARDBP-212ENST00000611008 AOC2O75106 756 aa7.52□□□□□ -1.21
TARDBP-212ENST00000611008 FAM87AP0C7U9 286 aa7.52□□□□□ -1.21
TARDBP-212ENST00000611008 MESP2Q0VG99 397 aa7.52□□□□□ -1.21
TARDBP-212ENST00000611008 PDE3AQ14432 1141 aa7.52□□□□□ -1.21
TARDBP-212ENST00000611008 CCER1Q8TC90 406 aaPredicted RBP7.52□□□□□ -1.21
TARDBP-212ENST00000611008 KRTAP9-7A8MTY7 169 aa7.51□□□□□ -1.21
TARDBP-212ENST00000611008 ECEL1O95672 775 aa7.51□□□□□ -1.21
TARDBP-212ENST00000611008 CD96P40200 585 aa7.51□□□□□ -1.21
TARDBP-212ENST00000611008 CDK5R2Q13319 367 aa7.51□□□□□ -1.21
TARDBP-212ENST00000611008 SPRED3Q2MJR0 410 aa7.51□□□□□ -1.21
TARDBP-212ENST00000611008 CCNJLQ8IV13 435 aa7.51□□□□□ -1.21
TARDBP-212ENST00000611008 TRIM56Q9BRZ2 755 aaKnown RBP7.51□□□□□ -1.21
TARDBP-212ENST00000611008 ZFYVE28Q9HCC9 887 aa7.51□□□□□ -1.21
TARDBP-212ENST00000611008 ZNF865P0CJ78 1059 aaPredicted RBP7.5□□□□□ -1.21
TARDBP-212ENST00000611008 GRIA4P48058 902 aa7.5□□□□□ -1.21
TARDBP-212ENST00000611008 IFI16Q16666 785 aaKnown RBP7.5□□□□□ -1.21
TARDBP-212ENST00000611008 AOC3Q16853 763 aa7.5□□□□□ -1.21
TARDBP-212ENST00000611008 ARHGAP27Q6ZUM4 889 aa7.5□□□□□ -1.21
TARDBP-212ENST00000611008 GTF3C2Q8WUA4 911 aaPredicted RBP7.5□□□□□ -1.21
TARDBP-212ENST00000611008 TOX2Q96NM4 488 aa7.5□□□□□ -1.21
TARDBP-212ENST00000611008 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
TARDBP-212ENST00000611008 LIN7BQ9HAP6 207 aa7.5□□□□□ -1.21
TARDBP-212ENST00000611008 FAM53CQ9NYF3 392 aa7.5□□□□□ -1.21
TARDBP-212ENST00000611008 SYNGAP1Q96PV0 1343 aa7.5□□□□□ -1.21
TARDBP-212ENST00000611008 POLR3DP05423 398 aaPredicted RBP7.49□□□□□ -1.21
TARDBP-212ENST00000611008 RAP1GAPP47736 663 aa7.49□□□□□ -1.21
TARDBP-212ENST00000611008 HRASLS5Q96KN8 279 aa7.49□□□□□ -1.21
TARDBP-212ENST00000611008 WDR18Q9BV38 432 aa7.49□□□□□ -1.21
TARDBP-212ENST00000611008 PIDD1Q9HB75 910 aa7.49□□□□□ -1.21
TARDBP-212ENST00000611008 PPP1R9AQ9ULJ8 1098 aa7.49□□□□□ -1.21
TARDBP-212ENST00000611008 A0A1W2PP55 124 aa7.48□□□□□ -1.21
TARDBP-212ENST00000611008 B3GALT4O96024 378 aa7.48□□□□□ -1.21
TARDBP-212ENST00000611008 ANGEL2Q5VTE6 544 aaKnown RBP7.48□□□□□ -1.21
TARDBP-212ENST00000611008 ZSWIM9Q86XI8 627 aa7.48□□□□□ -1.21
TARDBP-212ENST00000611008 TCF12Q99081 682 aa7.48□□□□□ -1.21
TARDBP-212ENST00000611008 MKNK2Q9HBH9 465 aa7.48□□□□□ -1.21
TARDBP-212ENST00000611008 TMEM265A0A087WTH1 108 aa7.47□□□□□ -1.21
TARDBP-212ENST00000611008 MLANAQ16655 118 aa7.47□□□□□ -1.21
TARDBP-212ENST00000611008 SLC23A3Q6PIS1 610 aa7.47□□□□□ -1.21
TARDBP-212ENST00000611008 FLAD1Q8NFF5 587 aa7.47□□□□□ -1.21
TARDBP-212ENST00000611008 ZSCAN18Q8TBC5 510 aaPredicted RBP7.47□□□□□ -1.21
TARDBP-212ENST00000611008 CEACAM5P06731 702 aa7.46□□□□□ -1.22
TARDBP-212ENST00000611008 MTMR3Q13615 1198 aa7.46□□□□□ -1.22
TARDBP-212ENST00000611008 KCNMB1Q16558 191 aa7.46□□□□□ -1.22
TARDBP-212ENST00000611008 LILRA6Q6PI73 481 aa7.46□□□□□ -1.22
TARDBP-212ENST00000611008 ATXN3LQ9H3M9 355 aa7.46□□□□□ -1.22
TARDBP-212ENST00000611008 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.46□□□□□ -1.22
TARDBP-212ENST00000611008 TMPRSS2O15393 492 aa7.45□□□□□ -1.22
TARDBP-212ENST00000611008 FAM13AO94988 1023 aa7.45□□□□□ -1.22
TARDBP-212ENST00000611008 CFPP27918 469 aa7.45□□□□□ -1.22
TARDBP-212ENST00000611008 AP3B2Q13367 1082 aa7.45□□□□□ -1.22
TARDBP-212ENST00000611008 CILP2Q8IUL8 1156 aa7.45□□□□□ -1.22
TARDBP-212ENST00000611008 PPP1R16BQ96T49 567 aa7.45□□□□□ -1.22
TARDBP-212ENST00000611008 CRIM1Q9NZV1 1036 aa7.45□□□□□ -1.22
TARDBP-212ENST00000611008 U3KQE9 123 aa7.45□□□□□ -1.22
TARDBP-212ENST00000611008 SLFN14P0C7P3 912 aa7.44□□□□□ -1.22
TARDBP-212ENST00000611008 NPR3P17342 541 aa7.44□□□□□ -1.22
TARDBP-212ENST00000611008 OXCT1P55809 520 aa7.44□□□□□ -1.22
TARDBP-212ENST00000611008 GALNT12Q8IXK2 581 aa7.44□□□□□ -1.22
TARDBP-212ENST00000611008 SMYD4Q8IYR2 804 aaPredicted RBP7.44□□□□□ -1.22
TARDBP-212ENST00000611008 PBXIP1Q96AQ6 731 aa7.44□□□□□ -1.22
TARDBP-212ENST00000611008 ZNF576Q9H609 170 aa7.44□□□□□ -1.22
TARDBP-212ENST00000611008 ZNF503-AS2A6NEH8 195 aa7.43□□□□□ -1.22
TARDBP-212ENST00000611008 TSPAN15O95858 294 aa7.43□□□□□ -1.22
TARDBP-212ENST00000611008 LIG1P18858 919 aa7.43□□□□□ -1.22
TARDBP-212ENST00000611008 LRRC56Q8IYG6 542 aaPredicted RBP7.43□□□□□ -1.22
TARDBP-212ENST00000611008 GJD3Q8N144 294 aa7.43□□□□□ -1.22
TARDBP-212ENST00000611008 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
TARDBP-212ENST00000611008 PLAGL2Q9UPG8 496 aa7.43□□□□□ -1.22
TARDBP-212ENST00000611008 FZD6O60353 706 aa7.42□□□□□ -1.22
TARDBP-212ENST00000611008 RNGTTO60942 597 aaKnown RBP7.42□□□□□ -1.22
TARDBP-212ENST00000611008 LEFTY1O75610 366 aa7.42□□□□□ -1.22
TARDBP-212ENST00000611008 ID3Q02535 119 aa7.42□□□□□ -1.22
TARDBP-212ENST00000611008 LCE5AQ5TCM9 118 aa7.42□□□□□ -1.22
TARDBP-212ENST00000611008 ANKLE2Q86XL3 938 aa7.42□□□□□ -1.22
TARDBP-212ENST00000611008 SIAH1Q8IUQ4 282 aa7.42□□□□□ -1.22
TARDBP-212ENST00000611008 DUSP23Q9BVJ7 150 aa7.42□□□□□ -1.22
TARDBP-212ENST00000611008 PRDM7Q9NQW5 492 aa7.42□□□□□ -1.22
TARDBP-212ENST00000611008 PRRG2O14669 202 aa7.41□□□□□ -1.22
TARDBP-212ENST00000611008 ITIH2P19823 946 aa7.41□□□□□ -1.22
TARDBP-212ENST00000611008 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
TARDBP-212ENST00000611008 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
TARDBP-212ENST00000611008 C1QL4Q86Z23 238 aa7.41□□□□□ -1.22
TARDBP-212ENST00000611008 WDR89Q96FK6 387 aaPredicted RBP7.41□□□□□ -1.22
TARDBP-212ENST00000611008 CCDC86Q9H6F5 360 aaKnown RBP7.41□□□□□ -1.22
TARDBP-212ENST00000611008 SNX11Q9Y5W9 270 aa7.41□□□□□ -1.22
TARDBP-212ENST00000611008 NCANO14594 1321 aa7.41□□□□□ -1.22
TARDBP-212ENST00000611008 ZSCAN22P10073 491 aaPredicted RBP7.4□□□□□ -1.22
TARDBP-212ENST00000611008 ITPKAP23677 461 aa7.4□□□□□ -1.22
TARDBP-212ENST00000611008 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
TARDBP-212ENST00000611008 KIAA0319Q5VV43 1072 aa7.4□□□□□ -1.22
TARDBP-212ENST00000611008 LIN37Q96GY3 246 aaPredicted RBP7.4□□□□□ -1.22
TARDBP-212ENST00000611008 ZC3H12CQ9C0D7 883 aaKnown RBP7.4□□□□□ -1.22
TARDBP-212ENST00000611008 EHD4Q9H223 541 aa7.4□□□□□ -1.22
TARDBP-212ENST00000611008 DISC1Q9NRI5 854 aa7.4□□□□□ -1.22
TARDBP-212ENST00000611008 CCDC87Q9NVE4 849 aa7.4□□□□□ -1.22
TARDBP-212ENST00000611008 PCOLCE2Q9UKZ9 415 aa7.4□□□□□ -1.22
TARDBP-212ENST00000611008 B8ZZF3 427 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms