RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 MAPK8IP1Q9UQF2 711 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 BTBD18B2RXH4 712 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 CYP27B1O15528 508 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 ADAMTS2O95450 1211 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 SSBP05455 408 aaKnown RBP eCLIP7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 ATP1A3P13637 1013 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 STIM1Q13586 685 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 RRAGBQ5VZM2 374 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 SAMD1Q6SPF0 538 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 LEKR1Q6ZMV7 388 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 DZIP3Q86Y13 1208 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 LINC00301Q8NCQ3 95 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 ACSBG1Q96GR2 724 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 KRT23Q9C075 422 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 SPTLC3Q9NUV7 552 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 CCT6AP40227 531 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 LMAN1P49257 510 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 DNA2P51530 1060 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 ATP2B2Q01814 1243 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 ZNF174Q15697 407 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 CAVIN4Q5BKX8 364 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 PLIN2Q99541 437 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 DESI2Q9BSY9 194 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 TEX13AQ9BXU3 409 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 DEF6Q9H4E7 631 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 ARFGAP3Q9NP61 516 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 RTEL1Q9NZ71 1219 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 TMEM131LA2VDJ0 1609 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 NRKQ7Z2Y5 1582 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 DLC1Q96QB1 1528 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 USP32Q8NFA0 1604 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 NRXN3Q9Y4C0 1643 aa7.85□□□□□ -1.15
SYNPO2-206ENST00000610556 EXOC5O00471 708 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 NCBP1Q09161 790 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 ST3GAL1Q11201 340 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 TCIRG1Q13488 830 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 IFIT1BQ5T764 474 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 SYNE4Q8N205 404 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 TANGO6Q9C0B7 1094 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 ZHX3Q9H4I2 956 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 TSPY2A6NKD2 308 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 ADAMTS13Q76LX8 1427 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 ESR2Q92731 530 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 CDK5RAP3Q96JB5 506 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 RUFY1Q96T51 708 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 CNNM2Q9H8M5 875 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 INCENPQ9NQS7 918 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 PCDHA5Q9Y5H7 936 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 VWA3AA6NCI4 1184 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 SNAP23O00161 211 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 PHACTR2O75167 634 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 GREM2Q9H772 168 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 MKNK2Q9HBH9 465 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 IMPACTQ9P2X3 320 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 SERTAD1Q9UHV2 236 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 PCDH11XQ9BZA7 1347 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 PCDH11YQ9BZA8 1340 aa7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 USP42Q9H9J4 1324 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-206ENST00000610556 EIF3JO75822 258 aaKnown RBP7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 RHOXF2BP0C7M4 288 aa7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 CMA1P23946 247 aa7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 PHKA1P46020 1223 aa7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 ENOX2Q16206 610 aaKnown RBP7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 ZNF569Q5MCW4 686 aa7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 KANK3Q6NY19 840 aa7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 RHOXF2Q9BQY4 288 aa7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 VAT1LQ9HCJ6 419 aa7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 V9GY48 417 aaPredicted RBP7.84□□□□□ -1.16
SYNPO2-206ENST00000610556 SPATA31D1Q6ZQQ2 1576 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 ZNF142P52746 1687 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 CCDC194A0A1B0GVG4 234 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 GOLGA6L9A6NEM1 432 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 COBLO75128 1261 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 CCDC175P0C221 793 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 MCM7P33993 719 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 USP5P45974 858 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 NOM1Q5C9Z4 860 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 PLA2G4DQ86XP0 818 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 TMEM87BQ96K49 555 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 CWC15Q9P013 229 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 NIP7Q9Y221 180 aaKnown RBP eCLIP7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 PDE6AP16499 860 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 UBA7P41226 1012 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 ETF1P62495 437 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 LONRF3Q496Y0 759 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 GRAMD1CQ8IYS0 662 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 VPS16Q9H269 839 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 VPS54Q9P1Q0 977 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 ASAP1Q9ULH1 1129 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 CUTAO60888 179 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 KIF23Q02241 960 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 POSTNQ15063 836 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 IGSF22Q8N9C0 903 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 PPP1R13BQ96KQ4 1090 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 STX8Q9UNK0 236 aa7.83□□□□□ -1.16
SYNPO2-206ENST00000610556 SH3TC1Q8TE82 1336 aa7.82□□□□□ -1.16
SYNPO2-206ENST00000610556 FER1L4A9Z1Z3 1794 aa7.82□□□□□ -1.16
SYNPO2-206ENST00000610556 A0A1W2PQ27 194 aa7.82□□□□□ -1.16
SYNPO2-206ENST00000610556 A0A1W2PQ64 194 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms