RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 MTA3Q9BTC8 594 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 KRT23Q9C075 422 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 EPB41L4AQ9HCS5 686 aaPredicted RBP23.66■■□□□ 1.38
PNKP-214ENST00000600573 ANAPC4Q9UJX5 808 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 SMC3Q9UQE7 1217 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 ZDHHC9Q9Y397 364 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 COL11A2P13942 1736 aaPredicted RBP23.66■■□□□ 1.38
PNKP-214ENST00000600573 PODNQ7Z5L7 613 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 CCDC83Q8IWF9 413 aa23.66■■□□□ 1.38
PNKP-214ENST00000600573 MB21D2Q8IYB1 491 aaPredicted RBP23.66■■□□□ 1.38
PNKP-214ENST00000600573 LARP6Q9BRS8 491 aaKnown RBP23.66■■□□□ 1.38
PNKP-214ENST00000600573 MAST2Q6P0Q8 1798 aa23.65■■□□□ 1.38
PNKP-214ENST00000600573 G3V3G9 751 aa23.65■■□□□ 1.38
PNKP-214ENST00000600573 EVCP57679 992 aa23.65■■□□□ 1.38
PNKP-214ENST00000600573 DCAF8Q5TAQ9 597 aa23.65■■□□□ 1.38
PNKP-214ENST00000600573 SLC51AQ86UW1 340 aa23.65■■□□□ 1.38
PNKP-214ENST00000600573 C7orf43Q8WVR3 580 aa23.65■■□□□ 1.38
PNKP-214ENST00000600573 ZNF274Q96GC6 653 aaPredicted RBP23.65■■□□□ 1.38
PNKP-214ENST00000600573 WDR33Q9C0J8 1336 aaKnown RBP23.65■■□□□ 1.38
PNKP-214ENST00000600573 CHD4Q14839 1912 aa23.65■■□□□ 1.38
PNKP-214ENST00000600573 A0A0G2JLW4 131 aa23.64■■□□□ 1.38
PNKP-214ENST00000600573 PRKAB2O43741 272 aa23.64■■□□□ 1.38
PNKP-214ENST00000600573 TRAK2O60296 914 aa23.64■■□□□ 1.38
PNKP-214ENST00000600573 CHRNA5P30532 468 aa23.64■■□□□ 1.38
PNKP-214ENST00000600573 AKNAD1Q5T1N1 836 aa23.64■■□□□ 1.38
PNKP-214ENST00000600573 STAG1Q8WVM7 1258 aa23.64■■□□□ 1.38
PNKP-214ENST00000600573 PLCG2P16885 1265 aa23.63■■□□□ 1.37
PNKP-214ENST00000600573 POLD1P28340 1107 aa23.63■■□□□ 1.37
PNKP-214ENST00000600573 SKOR2Q2VWA4 1001 aaPredicted RBP23.63■■□□□ 1.37
PNKP-214ENST00000600573 MFSD6Q6ZSS7 791 aa23.63■■□□□ 1.37
PNKP-214ENST00000600573 TTLL6Q8N841 843 aa23.63■■□□□ 1.37
PNKP-214ENST00000600573 BRF1Q92994 677 aa23.63■■□□□ 1.37
PNKP-214ENST00000600573 TCEANC2Q96MN5 208 aa23.63■■□□□ 1.37
PNKP-214ENST00000600573 PDGFDQ9GZP0 370 aaPredicted RBP23.63■■□□□ 1.37
PNKP-214ENST00000600573 MTFR1LQ9H019 292 aa23.63■■□□□ 1.37
PNKP-214ENST00000600573 RIMBP2O15034 1052 aa23.62■■□□□ 1.37
PNKP-214ENST00000600573 TGFB2P61812 414 aa23.62■■□□□ 1.37
PNKP-214ENST00000600573 COL9A3Q14050 684 aaPredicted RBP23.62■■□□□ 1.37
PNKP-214ENST00000600573 MFSD14BQ5SR56 506 aa23.62■■□□□ 1.37
PNKP-214ENST00000600573 TMEM87BQ96K49 555 aa23.62■■□□□ 1.37
PNKP-214ENST00000600573 PRC1O43663 620 aa23.62■■□□□ 1.37
PNKP-214ENST00000600573 FKBP1AP62942 108 aaKnown RBP23.62■■□□□ 1.37
PNKP-214ENST00000600573 DYNLL1P63167 89 aaKnown RBP23.62■■□□□ 1.37
PNKP-214ENST00000600573 LLPHQ9BRT6 129 aaKnown RBP23.62■■□□□ 1.37
PNKP-214ENST00000600573 NBPF3Q9H094 633 aa23.62■■□□□ 1.37
PNKP-214ENST00000600573 AATFQ9NY61 560 aaKnown RBP eCLIP23.62■■□□□ 1.37
PNKP-214ENST00000600573 CCDC88AQ3V6T2 1871 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 MROH7-TTC4A0A0A0MT08 1334 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 PFKFB2O60825 505 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 PPARAQ07869 468 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 ST3GAL1Q11201 340 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 SBK1Q52WX2 424 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 TBC1D10CQ8IV04 446 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 TIAM2Q8IVF5 1701 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 RTKN2Q8IZC4 609 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 GTF3C6Q969F1 213 aa23.61■■□□□ 1.37
PNKP-214ENST00000600573 SLC3A2P08195 630 aaKnown RBP23.6■■□□□ 1.37
PNKP-214ENST00000600573 GTF2IP78347 998 aa23.6■■□□□ 1.37
PNKP-214ENST00000600573 SOGA3Q5TF21 947 aa23.6■■□□□ 1.37
PNKP-214ENST00000600573 VPS33BQ9H267 617 aa23.6■■□□□ 1.37
PNKP-214ENST00000600573 ARPP21Q9UBL0 812 aaPredicted RBP23.6■■□□□ 1.37
PNKP-214ENST00000600573 JAG2Q9Y219 1238 aa23.6■■□□□ 1.37
PNKP-214ENST00000600573 KIAA1551Q9HCM1 1747 aa23.6■■□□□ 1.37
PNKP-214ENST00000600573 GPR75-ASB3A0A0A6YYF3 556 aa23.59■■□□□ 1.37
PNKP-214ENST00000600573 PDCP20941 246 aa23.59■■□□□ 1.37
PNKP-214ENST00000600573 SDR42E1Q8WUS8 393 aa23.59■■□□□ 1.37
PNKP-214ENST00000600573 MCTP1Q6DN14 999 aa23.59■■□□□ 1.37
PNKP-214ENST00000600573 NECAB1Q8N987 351 aa23.59■■□□□ 1.37
PNKP-214ENST00000600573 GJB2P29033 226 aa23.58■■□□□ 1.36
PNKP-214ENST00000600573 OLFM4Q6UX06 510 aa23.58■■□□□ 1.36
PNKP-214ENST00000600573 MRIQ9BWK5 157 aa23.58■■□□□ 1.36
PNKP-214ENST00000600573 DCP1AQ9NPI6 582 aaPredicted RBP23.58■■□□□ 1.36
PNKP-214ENST00000600573 GAKO14976 1311 aa23.57■■□□□ 1.36
PNKP-214ENST00000600573 DHX16O60231 1041 aaKnown RBP23.57■■□□□ 1.36
PNKP-214ENST00000600573 FGRP09769 529 aa23.57■■□□□ 1.36
PNKP-214ENST00000600573 SART3Q15020 963 aaKnown RBP23.57■■□□□ 1.36
PNKP-214ENST00000600573 CCDC93Q567U6 631 aa23.57■■□□□ 1.36
PNKP-214ENST00000600573 AMOTL1Q8IY63 956 aa23.57■■□□□ 1.36
PNKP-214ENST00000600573 TMTC2Q8N394 836 aa23.57■■□□□ 1.36
PNKP-214ENST00000600573 LRRC2Q9BYS8 371 aa23.57■■□□□ 1.36
PNKP-214ENST00000600573 ANGEL1Q9UNK9 670 aaKnown RBP23.57■■□□□ 1.36
PNKP-214ENST00000600573 MINDY4BA8MYZ0 360 aa23.56■■□□□ 1.36
PNKP-214ENST00000600573 LIFRP42702 1097 aa23.56■■□□□ 1.36
PNKP-214ENST00000600573 CTDSPL2Q05D32 466 aa23.56■■□□□ 1.36
PNKP-214ENST00000600573 KIAA2012Q0VF49 1180 aa23.56■■□□□ 1.36
PNKP-214ENST00000600573 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
PNKP-214ENST00000600573 CTR9Q6PD62 1173 aa23.56■■□□□ 1.36
PNKP-214ENST00000600573 KIF3AQ9Y496 699 aa23.56■■□□□ 1.36
PNKP-214ENST00000600573 STX6O43752 255 aa23.55■■□□□ 1.36
PNKP-214ENST00000600573 ANTXR2P58335 489 aa23.55■■□□□ 1.36
PNKP-214ENST00000600573 APOBRQ0VD83 1088 aa23.55■■□□□ 1.36
PNKP-214ENST00000600573 FOXD4L5Q5VV16 416 aaPredicted RBP23.55■■□□□ 1.36
PNKP-214ENST00000600573 FOXD4L4Q8WXT5 416 aaPredicted RBP23.55■■□□□ 1.36
PNKP-214ENST00000600573 ESR2Q92731 530 aa23.55■■□□□ 1.36
PNKP-214ENST00000600573 PSMD1Q99460 953 aa23.55■■□□□ 1.36
PNKP-214ENST00000600573 B4E1Z4 1266 aa23.55■■□□□ 1.36
PNKP-214ENST00000600573 ZSCAN22P10073 491 aaPredicted RBP23.55■■□□□ 1.36
PNKP-214ENST00000600573 SYT1P21579 422 aa23.55■■□□□ 1.36
PNKP-214ENST00000600573 PDIA3P30101 505 aaKnown RBP23.55■■□□□ 1.36
PNKP-214ENST00000600573 USP5P45974 858 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms