RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 NIF3L1Q9GZT8 377 aa6.33□□□□□ -1.4
LINC01539-206ENST00000593282 CHRDQ9H2X0 955 aa6.33□□□□□ -1.4
LINC01539-206ENST00000593282 TMA7Q9Y2S6 64 aaKnown RBP6.33□□□□□ -1.4
LINC01539-206ENST00000593282 TLDC2A0PJX2 215 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 SOX1O00570 391 aaPredicted RBP6.32□□□□□ -1.4
LINC01539-206ENST00000593282 MAPK8P45983 427 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 EHHADHQ08426 723 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 PDE3BQ13370 1112 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 PAOXQ6QHF9 649 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 NT5DC4Q86YG4 428 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 GJD3Q8N144 294 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 NXPE3Q969Y0 559 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 DNAJC2Q99543 621 aaKnown RBP6.32□□□□□ -1.4
LINC01539-206ENST00000593282 YIPF2Q9BWQ6 316 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 NLRP2Q9NX02 1062 aa6.32□□□□□ -1.4
LINC01539-206ENST00000593282 LOC100289279A0A1B0GTE1 492 aa6.31□□□□□ -1.4
LINC01539-206ENST00000593282 FAM95CA0A1B0GW59 222 aa6.31□□□□□ -1.4
LINC01539-206ENST00000593282 HOXA10P31260 410 aaPredicted RBP6.31□□□□□ -1.4
LINC01539-206ENST00000593282 USP5P45974 858 aa6.31□□□□□ -1.4
LINC01539-206ENST00000593282 GSTM4Q03013 218 aa6.31□□□□□ -1.4
LINC01539-206ENST00000593282 FMR1Q06787 632 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC01539-206ENST00000593282 TMPRSS13Q9BYE2 586 aa6.31□□□□□ -1.4
LINC01539-206ENST00000593282 TGIF2Q9GZN2 237 aa6.31□□□□□ -1.4
LINC01539-206ENST00000593282 PRKAG2Q9UGJ0 569 aa6.31□□□□□ -1.4
LINC01539-206ENST00000593282 ARID4BQ4LE39 1312 aaPredicted RBP6.3□□□□□ -1.4
LINC01539-206ENST00000593282 TNFRSF21O75509 655 aa6.3□□□□□ -1.4
LINC01539-206ENST00000593282 VN1R5Q7Z5H4 357 aa6.3□□□□□ -1.4
LINC01539-206ENST00000593282 CERS3Q8IU89 383 aa6.3□□□□□ -1.4
LINC01539-206ENST00000593282 SMG8Q8ND04 991 aaKnown RBP6.3□□□□□ -1.4
LINC01539-206ENST00000593282 ALKBH8Q96BT7 664 aaKnown RBP6.3□□□□□ -1.4
LINC01539-206ENST00000593282 SETDB2Q96T68 719 aa6.3□□□□□ -1.4
LINC01539-206ENST00000593282 METTL22Q9BUU2 404 aaPredicted RBP6.3□□□□□ -1.4
LINC01539-206ENST00000593282 METTL5Q9NRN9 209 aaKnown RBP6.3□□□□□ -1.4
LINC01539-206ENST00000593282 FOXD3Q9UJU5 478 aaPredicted RBP6.3□□□□□ -1.4
LINC01539-206ENST00000593282 WWC3Q9ULE0 1092 aa6.3□□□□□ -1.4
LINC01539-206ENST00000593282 SBNO2Q9Y2G9 1366 aa6.3□□□□□ -1.4
LINC01539-206ENST00000593282 F13BP05160 661 aa6.29□□□□□ -1.4
LINC01539-206ENST00000593282 ATP2B1P20020 1258 aa6.29□□□□□ -1.4
LINC01539-206ENST00000593282 ORC1Q13415 861 aa6.29□□□□□ -1.4
LINC01539-206ENST00000593282 CPSF6Q16630 551 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC01539-206ENST00000593282 CCDC144BQ3MJ40 725 aa6.29□□□□□ -1.4
LINC01539-206ENST00000593282 EXOSC6Q5RKV6 272 aaKnown RBP6.29□□□□□ -1.4
LINC01539-206ENST00000593282 FBLIM1Q8WUP2 373 aa6.29□□□□□ -1.4
LINC01539-206ENST00000593282 DHX38Q92620 1227 aaKnown RBP6.29□□□□□ -1.4
LINC01539-206ENST00000593282 TBC1D32Q96NH3 1257 aa6.29□□□□□ -1.4
LINC01539-206ENST00000593282 GMLQ99445 158 aa6.29□□□□□ -1.4
LINC01539-206ENST00000593282 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
LINC01539-206ENST00000593282 SUGCTQ9HAC7 445 aa6.29□□□□□ -1.4
LINC01539-206ENST00000593282 RNF19AQ9NV58 838 aa6.29□□□□□ -1.4
LINC01539-206ENST00000593282 CCDC180Q9P1Z9 1646 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 MARCH6O60337 910 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
LINC01539-206ENST00000593282 TIAF1O95411 115 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 LDHBP07195 334 aaKnown RBP6.28□□□□□ -1.4
LINC01539-206ENST00000593282 ESRRAP11474 423 aaPredicted RBP6.28□□□□□ -1.4
LINC01539-206ENST00000593282 DRD2P14416 443 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 FOSL1P15407 271 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 ITGAEP38570 1179 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 FGD1P98174 961 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 FANCCQ00597 558 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 EGFLAMQ63HQ2 1017 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 TP53INP2Q8IXH6 220 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 ABI1Q8IZP0 508 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 TMEM87AQ8NBN3 555 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 BHLHE41Q9C0J9 482 aaPredicted RBP6.28□□□□□ -1.4
LINC01539-206ENST00000593282 LATS2Q9NRM7 1088 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 TBX22Q9Y458 520 aa6.28□□□□□ -1.4
LINC01539-206ENST00000593282 PNMA6FA0A0J9YX94 578 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 CYP26A1O43174 497 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 RBL2Q08999 1139 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 HP1BP3Q5SSJ5 553 aaPredicted RBP6.27□□□□□ -1.41
LINC01539-206ENST00000593282 SDE2Q6IQ49 451 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 CDPF1Q6NVV7 123 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 NOL8Q76FK4 1167 aaKnown RBP6.27□□□□□ -1.41
LINC01539-206ENST00000593282 VSIG10LQ86VR7 867 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 RNF34Q969K3 372 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 FBXL18Q96ME1 805 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 CCSER2Q9H7U1 834 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 CAPN10Q9HC96 672 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 ADGRE2Q9UHX3 823 aa6.27□□□□□ -1.41
LINC01539-206ENST00000593282 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.27□□□□□ -1.41
LINC01539-206ENST00000593282 RAB6AP20340 208 aa6.26□□□□□ -1.41
LINC01539-206ENST00000593282 GTF2F1P35269 517 aaKnown RBP eCLIP6.26□□□□□ -1.41
LINC01539-206ENST00000593282 XPCQ01831 940 aaPredicted RBP6.26□□□□□ -1.41
LINC01539-206ENST00000593282 ENOX2Q16206 610 aaKnown RBP6.26□□□□□ -1.41
LINC01539-206ENST00000593282 TMC4Q7Z404 712 aa6.26□□□□□ -1.41
LINC01539-206ENST00000593282 FAM161BQ96MY7 647 aa6.26□□□□□ -1.41
LINC01539-206ENST00000593282 CSRNP1Q96S65 589 aa6.26□□□□□ -1.41
LINC01539-206ENST00000593282 DUSP9Q99956 384 aaKnown RBP6.26□□□□□ -1.41
LINC01539-206ENST00000593282 RAD18Q9NS91 495 aa6.26□□□□□ -1.41
LINC01539-206ENST00000593282 PARP2Q9UGN5 583 aa6.26□□□□□ -1.41
LINC01539-206ENST00000593282 METTL12A8MUP2 240 aa6.25□□□□□ -1.41
LINC01539-206ENST00000593282 EIF1AYO14602 144 aaKnown RBP6.25□□□□□ -1.41
LINC01539-206ENST00000593282 RAB11FIP3O75154 756 aa6.25□□□□□ -1.41
LINC01539-206ENST00000593282 PRPF40AO75400 957 aaKnown RBP6.25□□□□□ -1.41
LINC01539-206ENST00000593282 DLGAP3O95886 979 aa6.25□□□□□ -1.41
LINC01539-206ENST00000593282 POLR3DP05423 398 aaPredicted RBP6.25□□□□□ -1.41
LINC01539-206ENST00000593282 SOX4Q06945 474 aaPredicted RBP6.25□□□□□ -1.41
LINC01539-206ENST00000593282 PCDH1Q08174 1060 aa6.25□□□□□ -1.41
LINC01539-206ENST00000593282 MAP7Q14244 749 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms