RNA–Protein interactions for RNA: ENST00000592618.5

TMEM259-210, Transcript of transmembrane protein 259, human

TSL 5

Gene TMEM259, Length 1,877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-210	ENST00000592618	ZSCAN22	P10073	491 aa	Predicted RBP	29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	SCRN1	Q12765	414 aa		29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	SF3B2	Q13435	895 aa	Known RBP	29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	CHMP4C	Q96CF2	233 aa		29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	PDIA3	P30101	505 aa	Known RBP	29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	DYNLL1	P63167	89 aa	Known RBP	29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	AKNAD1	Q5T1N1	836 aa		29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	STAG1	Q8WVM7	1258 aa		29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	CNNM2	Q9H8M5	875 aa		29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	ANAPC4	Q9UJX5	808 aa		29.06	■■■□□ 2.24
TMEM259-210	ENST00000592618	LDHB	P07195	334 aa	Known RBP	29.05	■■■□□ 2.24
TMEM259-210	ENST00000592618	PDC	P20941	246 aa		29.05	■■■□□ 2.24
TMEM259-210	ENST00000592618	SDR42E1	Q8WUS8	393 aa		29.04	■■■□□ 2.24
TMEM259-210	ENST00000592618	NEDD4	P46934	1319 aa		29.04	■■■□□ 2.24
TMEM259-210	ENST00000592618	C6orf229	H3BNL8	230 aa		29.04	■■■□□ 2.24
TMEM259-210	ENST00000592618	FOXD4L5	Q5VV16	416 aa	Predicted RBP	29.04	■■■□□ 2.24
TMEM259-210	ENST00000592618	MCTP1	Q6DN14	999 aa		29.04	■■■□□ 2.24
TMEM259-210	ENST00000592618	SMARCC2	Q8TAQ2	1214 aa		29.04	■■■□□ 2.24
TMEM259-210	ENST00000592618	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	29.04	■■■□□ 2.24
TMEM259-210	ENST00000592618	JAG2	Q9Y219	1238 aa		29.04	■■■□□ 2.24
TMEM259-210	ENST00000592618	CTDSPL2	Q05D32	466 aa		29.03	■■■□□ 2.24
TMEM259-210	ENST00000592618	STYK1	Q6J9G0	422 aa		29.03	■■■□□ 2.24
TMEM259-210	ENST00000592618	CYB5R4	Q7L1T6	521 aa		29.03	■■■□□ 2.24
TMEM259-210	ENST00000592618	DZIP1	Q86YF9	867 aa	Known RBP	29.03	■■■□□ 2.24
TMEM259-210	ENST00000592618	KRT23	Q9C075	422 aa		29.03	■■■□□ 2.24
TMEM259-210	ENST00000592618	MTMR6	Q9Y217	621 aa		29.03	■■■□□ 2.24
TMEM259-210	ENST00000592618	MFSD6	Q6ZSS7	791 aa		29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618	TMEM87B	Q96K49	555 aa		29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618	GPHN	Q9NQX3	736 aa	Predicted RBP	29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618	TACC3	Q9Y6A5	838 aa		29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618		B4E1Z4	1266 aa		29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618	PPARA	Q07869	468 aa		29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618	LARP1B	Q659C4	914 aa	Known RBP	29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618	MPND	Q8N594	471 aa		29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618	NKX2-3	Q8TAU0	364 aa		29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618	ISY1	Q9ULR0	285 aa	Known RBP	29.02	■■■□□ 2.24
TMEM259-210	ENST00000592618	GSTO1	P78417	241 aa		29.01	■■■□□ 2.23
TMEM259-210	ENST00000592618	C2CD5	Q86YS7	1000 aa		29.01	■■■□□ 2.23
TMEM259-210	ENST00000592618	CRNKL1	Q9BZJ0	848 aa	Known RBP	29.01	■■■□□ 2.23
TMEM259-210	ENST00000592618	RNF41	Q9H4P4	317 aa	Predicted RBP	29.01	■■■□□ 2.23
TMEM259-210	ENST00000592618	ANGEL1	Q9UNK9	670 aa	Known RBP	29.01	■■■□□ 2.23
TMEM259-210	ENST00000592618		H0YIN7	160 aa		29	■■■□□ 2.23
TMEM259-210	ENST00000592618	LMBRD1	Q9NUN5	540 aa		29	■■■□□ 2.23
TMEM259-210	ENST00000592618	AATF	Q9NY61	560 aa	Known RBP eCLIP	29	■■■□□ 2.23	4e-6	■□□□□ 9.2
TMEM259-210	ENST00000592618	F13A1	P00488	732 aa		29	■■■□□ 2.23
TMEM259-210	ENST00000592618	NSUN7	Q8NE18	718 aa	Known RBP	29	■■■□□ 2.23
TMEM259-210	ENST00000592618	MTA3	Q9BTC8	594 aa		29	■■■□□ 2.23
TMEM259-210	ENST00000592618	COA1	Q9GZY4	146 aa		29	■■■□□ 2.23
TMEM259-210	ENST00000592618	ATP8A2	Q9NTI2	1148 aa		29	■■■□□ 2.23
TMEM259-210	ENST00000592618	FAM205A	Q6ZU69	1335 aa		28.99	■■■□□ 2.23
TMEM259-210	ENST00000592618	SH2B2	O14492	632 aa	Predicted RBP	28.99	■■■□□ 2.23
TMEM259-210	ENST00000592618	DEFB132	Q7Z7B7	95 aa		28.99	■■■□□ 2.23
TMEM259-210	ENST00000592618	IGDCC4	Q8TDY8	1250 aa		28.99	■■■□□ 2.23
TMEM259-210	ENST00000592618	TBC1D22A	Q8WUA7	517 aa		28.99	■■■□□ 2.23
TMEM259-210	ENST00000592618	INCENP	Q9NQS7	918 aa		28.99	■■■□□ 2.23
TMEM259-210	ENST00000592618	JAK2	O60674	1132 aa		28.98	■■■□□ 2.23
TMEM259-210	ENST00000592618	DTNB	O60941	627 aa		28.98	■■■□□ 2.23
TMEM259-210	ENST00000592618	CTDNEP1	O95476	244 aa		28.98	■■■□□ 2.23
TMEM259-210	ENST00000592618	TMX4	Q9H1E5	349 aa	Predicted RBP	28.98	■■■□□ 2.23
TMEM259-210	ENST00000592618	ZSWIM5	Q9P217	1185 aa		28.98	■■■□□ 2.23
TMEM259-210	ENST00000592618	ATP6V1D	Q9Y5K8	247 aa		28.98	■■■□□ 2.23
TMEM259-210	ENST00000592618	LDHC	P07864	332 aa		28.97	■■■□□ 2.23
TMEM259-210	ENST00000592618	PPP4C	P60510	307 aa		28.97	■■■□□ 2.23
TMEM259-210	ENST00000592618	HMGN5	P82970	282 aa	Known RBP	28.97	■■■□□ 2.23
TMEM259-210	ENST00000592618	GRIK5	Q16478	980 aa		28.97	■■■□□ 2.23
TMEM259-210	ENST00000592618	DPP8	Q6V1X1	898 aa	Predicted RBP	28.97	■■■□□ 2.23
TMEM259-210	ENST00000592618	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.97	■■■□□ 2.23	7e-10	■□□□□ 11
TMEM259-210	ENST00000592618	BAZ2A	Q9UIF9	1905 aa	Known RBP	28.97	■■■□□ 2.23
TMEM259-210	ENST00000592618	KLF18	A0A0U1RQI7	1052 aa		28.97	■■■□□ 2.23
TMEM259-210	ENST00000592618	CCT2	P78371	535 aa	Known RBP	28.97	■■■□□ 2.23
TMEM259-210	ENST00000592618	HPS5	Q9UPZ3	1129 aa		28.97	■■■□□ 2.23
TMEM259-210	ENST00000592618	KDM4A	O75164	1064 aa		28.96	■■■□□ 2.23
TMEM259-210	ENST00000592618	FGR	P09769	529 aa		28.96	■■■□□ 2.23
TMEM259-210	ENST00000592618	PC	P11498	1178 aa	Known RBP	28.96	■■■□□ 2.23
TMEM259-210	ENST00000592618	LIFR	P42702	1097 aa		28.96	■■■□□ 2.23
TMEM259-210	ENST00000592618	KLHL40	Q2TBA0	621 aa		28.96	■■■□□ 2.23
TMEM259-210	ENST00000592618	SGMS1	Q86VZ5	419 aa		28.96	■■■□□ 2.23
TMEM259-210	ENST00000592618	DCP1A	Q9NPI6	582 aa	Predicted RBP	28.96	■■■□□ 2.23
TMEM259-210	ENST00000592618	CTR9	Q6PD62	1173 aa		28.95	■■■□□ 2.23
TMEM259-210	ENST00000592618	OLFM4	Q6UX06	510 aa		28.95	■■■□□ 2.23
TMEM259-210	ENST00000592618	CHAMP1	Q96JM3	812 aa		28.95	■■■□□ 2.23
TMEM259-210	ENST00000592618	ZC3H12C	Q9C0D7	883 aa	Known RBP	28.95	■■■□□ 2.23
TMEM259-210	ENST00000592618	MINDY4B	A8MYZ0	360 aa		28.95	■■■□□ 2.22
TMEM259-210	ENST00000592618	CERS3	Q8IU89	383 aa		28.95	■■■□□ 2.22
TMEM259-210	ENST00000592618	NCOA5	Q9HCD5	579 aa	Known RBP	28.95	■■■□□ 2.22
TMEM259-210	ENST00000592618	MYH2	Q9UKX2	1941 aa		28.94	■■■□□ 2.22
TMEM259-210	ENST00000592618	DHX16	O60231	1041 aa	Known RBP	28.94	■■■□□ 2.22
TMEM259-210	ENST00000592618	SBK1	Q52WX2	424 aa		28.94	■■■□□ 2.22
TMEM259-210	ENST00000592618	CNKSR1	Q969H4	720 aa		28.94	■■■□□ 2.22
TMEM259-210	ENST00000592618	NAP1L2	Q9ULW6	460 aa	Predicted RBP	28.94	■■■□□ 2.22
TMEM259-210	ENST00000592618	DDX49	Q9Y6V7	483 aa	Known RBP	28.94	■■■□□ 2.22
TMEM259-210	ENST00000592618	MROH7-TTC4	A0A0A0MT08	1334 aa		28.93	■■■□□ 2.22
TMEM259-210	ENST00000592618	BAG3	O95817	575 aa		28.93	■■■□□ 2.22
TMEM259-210	ENST00000592618	MRE11	P49959	708 aa		28.93	■■■□□ 2.22
TMEM259-210	ENST00000592618	MFSD14B	Q5SR56	506 aa		28.93	■■■□□ 2.22
TMEM259-210	ENST00000592618	FAM163A	Q96GL9	167 aa	Predicted RBP	28.93	■■■□□ 2.22
TMEM259-210	ENST00000592618	LY9	Q9HBG7	655 aa		28.93	■■■□□ 2.22
TMEM259-210	ENST00000592618	PTPDC1	A2A3K4	754 aa		28.93	■■■□□ 2.22
TMEM259-210	ENST00000592618	VPS37C	A5D8V6	355 aa	Predicted RBP	28.93	■■■□□ 2.22
TMEM259-210	ENST00000592618	GOLGA8B	A8MQT2	603 aa		28.93	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms