RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 MYO3BQ8WXR4 1341 aa15.39■□□□□ 0.05
PTBP1-216ENST00000590887 USP17L3A6NCW0 530 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 USP17L4A6NCW7 530 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 E7EWF7 191 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 ECE2O60344 883 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 KCNA3P22001 575 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 MCM5P33992 734 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 USP5P45974 858 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 SLC4A3P48751 1232 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 DOK7Q18PE1 504 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 USP17L1Q7RTZ2 530 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 RIOK1Q9BRS2 568 aaKnown RBP15.38■□□□□ 0.05
PTBP1-216ENST00000590887 KRT23Q9C075 422 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 MROH7-TTC4A0A0A0MT08 1334 aa15.38■□□□□ 0.05
PTBP1-216ENST00000590887 CHD4Q14839 1912 aa15.37■□□□□ 0.05
PTBP1-216ENST00000590887 GSG1L2A8MUP6 293 aa15.37■□□□□ 0.05
PTBP1-216ENST00000590887 PDIA4P13667 645 aaKnown RBP15.37■□□□□ 0.05
PTBP1-216ENST00000590887 MMP14P50281 582 aa15.37■□□□□ 0.05
PTBP1-216ENST00000590887 HDLBPQ00341 1268 aaKnown RBP15.37■□□□□ 0.05
PTBP1-216ENST00000590887 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
PTBP1-216ENST00000590887 MFSD6Q6ZSS7 791 aa15.37■□□□□ 0.05
PTBP1-216ENST00000590887 INTS4Q96HW7 963 aaKnown RBP15.37■□□□□ 0.05
PTBP1-216ENST00000590887 AATFQ9NY61 560 aaKnown RBP eCLIP15.37■□□□□ 0.055e-7■■■■□ 20.4
PTBP1-216ENST00000590887 ARPP21Q9UBL0 812 aaPredicted RBP15.37■□□□□ 0.05
PTBP1-216ENST00000590887 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
PTBP1-216ENST00000590887 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.37■□□□□ 0.05
PTBP1-216ENST00000590887 MYH2Q9UKX2 1941 aa15.37■□□□□ 0.05
PTBP1-216ENST00000590887 GPR75-ASB3A0A0A6YYF3 556 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 HHIPL2Q6UWX4 724 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 NIM1KQ8IY84 436 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 LARGE2Q8N3Y3 721 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 TTC14Q96N46 770 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 MTA3Q9BTC8 594 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 DBNDD1Q9H9R9 158 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 ZNF287Q9HBT7 754 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 JAG2Q9Y219 1238 aa15.36■□□□□ 0.05
PTBP1-216ENST00000590887 AK2P54819 239 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 SART3Q15020 963 aaKnown RBP15.35■□□□□ 0.05
PTBP1-216ENST00000590887 AOC3Q16853 763 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 AKNAD1Q5T1N1 836 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 JDP2Q8WYK2 163 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 TEKT1Q969V4 418 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 TMX3Q96JJ7 454 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 TAOK3Q9H2K8 898 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 CHMP5Q9NZZ3 219 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 ANAPC4Q9UJX5 808 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 HDAC9Q9UKV0 1011 aa15.35■□□□□ 0.05
PTBP1-216ENST00000590887 TTF2Q9UNY4 1162 aaKnown RBP15.35■□□□□ 0.05
PTBP1-216ENST00000590887 LAMA4Q16363 1823 aa15.34■□□□□ 0.05
PTBP1-216ENST00000590887 HAND2P61296 217 aa15.34■□□□□ 0.05
PTBP1-216ENST00000590887 PDE4BQ07343 736 aa15.34■□□□□ 0.05
PTBP1-216ENST00000590887 SBK1Q52WX2 424 aa15.34■□□□□ 0.05
PTBP1-216ENST00000590887 ADGRA1Q86SQ6 560 aa15.34■□□□□ 0.05
PTBP1-216ENST00000590887 FBXL16Q8N461 479 aa15.34■□□□□ 0.05
PTBP1-216ENST00000590887 GAKO14976 1311 aa15.34■□□□□ 0.05
PTBP1-216ENST00000590887 ERICH2A1L162 156 aa15.33■□□□□ 0.04
PTBP1-216ENST00000590887 MINDY4BA8MYZ0 360 aa15.33■□□□□ 0.04
PTBP1-216ENST00000590887 IARSP41252 1262 aaKnown RBP15.33■□□□□ 0.04
PTBP1-216ENST00000590887 BTDP43251 543 aa15.33■□□□□ 0.04
PTBP1-216ENST00000590887 DYNLL1P63167 89 aaKnown RBP15.33■□□□□ 0.04
PTBP1-216ENST00000590887 PPARAQ07869 468 aa15.33■□□□□ 0.04
PTBP1-216ENST00000590887 CUL4AQ13619 759 aa15.33■□□□□ 0.04
PTBP1-216ENST00000590887 Q6ZUG5 572 aa15.33■□□□□ 0.04
PTBP1-216ENST00000590887 TMTC2Q8N394 836 aa15.33■□□□□ 0.04
PTBP1-216ENST00000590887 STAG1Q8WVM7 1258 aa15.33■□□□□ 0.04
PTBP1-216ENST00000590887 TMEM87BQ96K49 555 aa15.33■□□□□ 0.04
PTBP1-216ENST00000590887 FOXP2O15409 715 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 PRKAB2O43741 272 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 NUCB2P80303 420 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 TNIP1Q15025 636 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 TEX11Q8IYF3 940 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 SDR42E1Q8WUS8 393 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 ESR2Q92731 530 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 SLKQ9H2G2 1235 aaPredicted RBP15.32■□□□□ 0.04
PTBP1-216ENST00000590887 TAOK2Q9UL54 1235 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 ZNRF3Q9ULT6 936 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 BCS1LQ9Y276 419 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 LTBP3Q9NS15 1303 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 SNED1Q8TER0 1413 aa15.32■□□□□ 0.04
PTBP1-216ENST00000590887 CD2BP2O95400 341 aaKnown RBP15.31■□□□□ 0.04
PTBP1-216ENST00000590887 POLR3DP05423 398 aaPredicted RBP15.31■□□□□ 0.04
PTBP1-216ENST00000590887 EXOSC10Q01780 885 aaKnown RBP15.31■□□□□ 0.04
PTBP1-216ENST00000590887 CCDC178Q5BJE1 867 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 DACT2Q5SW24 774 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 SYNE3Q6ZMZ3 975 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 SLC51AQ86UW1 340 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 OGFOD1Q8N543 542 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 SPRYD3Q8NCJ5 442 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 ZNF384Q8TF68 577 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 EPB41L4AQ9HCS5 686 aaPredicted RBP15.31■□□□□ 0.04
PTBP1-216ENST00000590887 DCP1AQ9NPI6 582 aaPredicted RBP15.31■□□□□ 0.04
PTBP1-216ENST00000590887 TOMM22Q9NS69 142 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 MCM9Q9NXL9 1143 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
PTBP1-216ENST00000590887 BRCA1P38398 1863 aaKnown RBP15.31■□□□□ 0.04
PTBP1-216ENST00000590887 F8W031 263 aaPredicted RBP15.3■□□□□ 0.04
PTBP1-216ENST00000590887 PRC1O43663 620 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms