RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ADGRA2Q96PE1 1338 aa23.08■■□□□ 1.28
CCDC43-204ENST00000588687 RFX7Q2KHR2 1363 aa23.07■■□□□ 1.28
CCDC43-204ENST00000588687 ATRNL1Q5VV63 1379 aa23.07■■□□□ 1.28
CCDC43-204ENST00000588687 INPP5BP32019 993 aa23.07■■□□□ 1.28
CCDC43-204ENST00000588687 LACTBP83111 547 aaPredicted RBP23.07■■□□□ 1.28
CCDC43-204ENST00000588687 SNAPC2Q13487 334 aa23.07■■□□□ 1.28
CCDC43-204ENST00000588687 WDR66Q8TBY9 1149 aa23.07■■□□□ 1.28
CCDC43-204ENST00000588687 ZNF112Q9UJU3 913 aa23.07■■□□□ 1.28
CCDC43-204ENST00000588687 CEP290O15078 2479 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 SLC5A1P13866 664 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 PRDX5P30044 214 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 NFIAQ12857 509 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 DIXDC1Q155Q3 683 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 SLC9C1Q4G0N8 1177 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 DCAF15Q66K64 600 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 FAM151AQ8WW52 585 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 GCC1Q96CN9 775 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 HOOK2Q96ED9 719 aa23.06■■□□□ 1.28
CCDC43-204ENST00000588687 SZT2Q5T011 3432 aa23.05■■□□□ 1.28
CCDC43-204ENST00000588687 PPATQ06203 517 aa23.05■■□□□ 1.28
CCDC43-204ENST00000588687 MOGSQ13724 837 aa23.05■■□□□ 1.28
CCDC43-204ENST00000588687 ALDH1L2Q3SY69 923 aa23.05■■□□□ 1.28
CCDC43-204ENST00000588687 CDC42EP5Q6NZY7 148 aa23.05■■□□□ 1.28
CCDC43-204ENST00000588687 MIGA2Q7L4E1 593 aa23.05■■□□□ 1.28
CCDC43-204ENST00000588687 ZNF341Q9BYN7 854 aa23.05■■□□□ 1.28
CCDC43-204ENST00000588687 CIAO1O76071 339 aa23.04■■□□□ 1.28
CCDC43-204ENST00000588687 CTGFP29279 349 aa23.04■■□□□ 1.28
CCDC43-204ENST00000588687 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
CCDC43-204ENST00000588687 C17orf99Q6UX52 265 aa23.04■■□□□ 1.28
CCDC43-204ENST00000588687 FAM198AQ9UFP1 575 aa23.04■■□□□ 1.28
CCDC43-204ENST00000588687 KCNH4Q9UQ05 1017 aa23.04■■□□□ 1.28
CCDC43-204ENST00000588687 SALL1Q9NSC2 1324 aa23.04■■□□□ 1.28
CCDC43-204ENST00000588687 ZBTB22O15209 634 aa23.03■■□□□ 1.28
CCDC43-204ENST00000588687 ARHGEF6Q15052 776 aa23.03■■□□□ 1.28
CCDC43-204ENST00000588687 HABP4Q5JVS0 413 aaKnown RBP23.03■■□□□ 1.28
CCDC43-204ENST00000588687 TRMT2AQ8IZ69 625 aaKnown RBP23.03■■□□□ 1.28
CCDC43-204ENST00000588687 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.03■■□□□ 1.28
CCDC43-204ENST00000588687 CDCA7LQ96GN5 454 aa23.03■■□□□ 1.28
CCDC43-204ENST00000588687 FBXO3Q9UK99 471 aa23.03■■□□□ 1.28
CCDC43-204ENST00000588687 PTPRFP10586 1907 aa23.03■■□□□ 1.28
CCDC43-204ENST00000588687 MYH2Q9UKX2 1941 aa23.03■■□□□ 1.28
CCDC43-204ENST00000588687 ATP2B3Q16720 1220 aa23.02■■□□□ 1.28
CCDC43-204ENST00000588687 NOL9Q5SY16 702 aaKnown RBP23.02■■□□□ 1.28
CCDC43-204ENST00000588687 AK9Q5TCS8 1911 aa23.02■■□□□ 1.28
CCDC43-204ENST00000588687 TCP10Q12799 353 aa23.01■■□□□ 1.27
CCDC43-204ENST00000588687 ANKRD23Q86SG2 305 aa23.01■■□□□ 1.27
CCDC43-204ENST00000588687 SH3TC2Q8TF17 1288 aa23.01■■□□□ 1.27
CCDC43-204ENST00000588687 SIL1Q9H173 461 aa23.01■■□□□ 1.27
CCDC43-204ENST00000588687 SMC4Q9NTJ3 1288 aa23.01■■□□□ 1.27
CCDC43-204ENST00000588687 PHIPQ8WWQ0 1821 aa23.01■■□□□ 1.27
CCDC43-204ENST00000588687 PHKA1P46020 1223 aa23■■□□□ 1.27
CCDC43-204ENST00000588687 NBPF11Q86T75 865 aa23■■□□□ 1.27
CCDC43-204ENST00000588687 ZFPM1Q8IX07 1006 aa23■■□□□ 1.27
CCDC43-204ENST00000588687 TMEM106CQ9BVX2 250 aa23■■□□□ 1.27
CCDC43-204ENST00000588687 MGAMO43451 1857 aa22.99■■□□□ 1.27
CCDC43-204ENST00000588687 DOCK1Q14185 1865 aa22.99■■□□□ 1.27
CCDC43-204ENST00000588687 GNRH1P01148 92 aa22.99■■□□□ 1.27
CCDC43-204ENST00000588687 UBTFL1P0CB47 393 aaPredicted RBP22.99■■□□□ 1.27
CCDC43-204ENST00000588687 GAKO14976 1311 aa22.99■■□□□ 1.27
CCDC43-204ENST00000588687 SEMA3EO15041 775 aa22.98■■□□□ 1.27
CCDC43-204ENST00000588687 WDHD1O75717 1129 aaPredicted RBP22.98■■□□□ 1.27
CCDC43-204ENST00000588687 LDHBP07195 334 aaKnown RBP22.98■■□□□ 1.27
CCDC43-204ENST00000588687 SHISA4Q96DD7 197 aa22.98■■□□□ 1.27
CCDC43-204ENST00000588687 TRIM47Q96LD4 638 aa22.98■■□□□ 1.27
CCDC43-204ENST00000588687 CPA4Q9UI42 421 aa22.98■■□□□ 1.27
CCDC43-204ENST00000588687 PA2G4Q9UQ80 394 aaKnown RBP22.98■■□□□ 1.27
CCDC43-204ENST00000588687 PDHXO00330 501 aa22.97■■□□□ 1.27
CCDC43-204ENST00000588687 ADORA1P30542 326 aa22.97■■□□□ 1.27
CCDC43-204ENST00000588687 PRMT2P55345 433 aa22.97■■□□□ 1.27
CCDC43-204ENST00000588687 CEP126Q9P2H0 1117 aa22.97■■□□□ 1.27
CCDC43-204ENST00000588687 LRRFIP2Q9Y608 721 aaKnown RBP22.97■■□□□ 1.27
CCDC43-204ENST00000588687 PHF20L1A8MW92 1017 aa22.96■■□□□ 1.27
CCDC43-204ENST00000588687 IL15P40933 162 aaPredicted RBP22.96■■□□□ 1.27
CCDC43-204ENST00000588687 KIF22Q14807 665 aa22.96■■□□□ 1.27
CCDC43-204ENST00000588687 GPAT2Q6NUI2 795 aa22.96■■□□□ 1.27
CCDC43-204ENST00000588687 SH3BP5LQ7L8J4 393 aa22.96■■□□□ 1.27
CCDC43-204ENST00000588687 IDI2Q9BXS1 227 aa22.96■■□□□ 1.27
CCDC43-204ENST00000588687 COPRSQ9NQ92 184 aa22.96■■□□□ 1.27
CCDC43-204ENST00000588687 USP40Q9NVE5 1235 aa22.96■■□□□ 1.27
CCDC43-204ENST00000588687 SRRDQ9UH36 339 aa22.96■■□□□ 1.27
CCDC43-204ENST00000588687 DENND2AQ9ULE3 1009 aa22.96■■□□□ 1.27
CCDC43-204ENST00000588687 PDS5AQ29RF7 1337 aaKnown RBP22.96■■□□□ 1.27
CCDC43-204ENST00000588687 MYCP01106 439 aaPredicted RBP22.95■■□□□ 1.26
CCDC43-204ENST00000588687 RASGRF1Q13972 1273 aa22.95■■□□□ 1.26
CCDC43-204ENST00000588687 SLC4A8Q2Y0W8 1093 aa22.95■■□□□ 1.26
CCDC43-204ENST00000588687 MEIS3Q99687 375 aa22.95■■□□□ 1.26
CCDC43-204ENST00000588687 TRIOBPQ9H2D6 2365 aa22.94■■□□□ 1.26
CCDC43-204ENST00000588687 BCRP11274 1271 aa22.94■■□□□ 1.26
CCDC43-204ENST00000588687 OSBPP22059 807 aa22.94■■□□□ 1.26
CCDC43-204ENST00000588687 RGS3P49796 1198 aa22.94■■□□□ 1.26
CCDC43-204ENST00000588687 MAP3K10Q02779 954 aa22.94■■□□□ 1.26
CCDC43-204ENST00000588687 MTFR1Q15390 333 aa22.94■■□□□ 1.26
CCDC43-204ENST00000588687 CCDC102BQ68D86 513 aa22.94■■□□□ 1.26
CCDC43-204ENST00000588687 GNL3LQ9NVN8 582 aaKnown RBP22.94■■□□□ 1.26
CCDC43-204ENST00000588687 NOB1Q9ULX3 412 aaKnown RBP22.94■■□□□ 1.26
CCDC43-204ENST00000588687 CT47B1P0C2W7 299 aaPredicted RBP22.93■■□□□ 1.26
CCDC43-204ENST00000588687 PSMC4P43686 418 aa22.93■■□□□ 1.26
CCDC43-204ENST00000588687 FXR1P51114 621 aaKnown RBP eCLIP22.93■■□□□ 1.26
CCDC43-204ENST00000588687 LAMA3Q16787 3333 aa22.93■■□□□ 1.26
CCDC43-204ENST00000588687 A0A0G2JLL6 359 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms