RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 CCDC34Q96HJ3 373 aa18.41■□□□□ 0.54
PPP6R1-204ENST00000587457 CARD6Q9BX69 1037 aa18.41■□□□□ 0.54
PPP6R1-204ENST00000587457 GOLPH3LQ9H4A5 285 aa18.41■□□□□ 0.54
PPP6R1-204ENST00000587457 PALLDQ8WX93 1383 aa18.41■□□□□ 0.54
PPP6R1-204ENST00000587457 SFPQP23246 707 aaKnown RBP eCLIP18.41■□□□□ 0.54
PPP6R1-204ENST00000587457 TOB2Q14106 344 aaPredicted RBP18.41■□□□□ 0.54
PPP6R1-204ENST00000587457 NGLY1Q96IV0 654 aa18.41■□□□□ 0.54
PPP6R1-204ENST00000587457 RFX7Q2KHR2 1363 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 URI1O94763 535 aaPredicted RBP18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 REXO1L1PQ8IX06 675 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 ZNF34Q8IZ26 560 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 FBXO18Q8NFZ0 1043 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 BRF1Q92994 677 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 XAGE2Q96GT9 111 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 XPO4Q9C0E2 1151 aaKnown RBP18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 SMC2O95347 1197 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 MCMDC2Q4G0Z9 681 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 CCDC158Q5M9N0 1113 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 LDHAL6AQ6ZMR3 332 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 PHLPP2Q6ZVD8 1323 aa18.4■□□□□ 0.54
PPP6R1-204ENST00000587457 JCADQ9P266 1359 aa18.39■□□□□ 0.54
PPP6R1-204ENST00000587457 ANKRD18BA2A2Z9 1011 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 EFCAB8A8MWE9 144 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 H3BQV1 296 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 TPM1P09493 284 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 RPS6KB1P23443 525 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 IFFO2Q5TF58 517 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 CC2D1AQ6P1N0 951 aaPredicted RBP18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 SRLQ86TD4 932 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 GOLGA5Q8TBA6 731 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 KINO60870 393 aaKnown RBP18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 KCNJ6P48051 423 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 FKBP4Q02790 459 aaKnown RBP eCLIP18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 METTL24Q5JXM2 366 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 CCDC73Q6ZRK6 1079 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 AK7Q96M32 723 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 SRRTQ9BXP5 876 aaKnown RBP18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 NAT10Q9H0A0 1025 aaKnown RBP18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 IFNKQ9P0W0 207 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 RIPOR2Q9Y4F9 1068 aa18.39■□□□□ 0.53
PPP6R1-204ENST00000587457 PDE8AO60658 829 aa18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 GTF2A1P52655 376 aaPredicted RBP18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 EVCP57679 992 aa18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 TTC39AQ5SRH9 613 aa18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 SUSD4Q5VX71 490 aa18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 YY1AP1Q9H869 796 aa18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 CNNM1Q9NRU3 951 aa18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 NRDCO43847 1150 aa18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 LMAN1P49257 510 aa18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 TRIM65Q6PJ69 517 aa18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 FTOQ9C0B1 505 aaKnown RBP eCLIP18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 ZSCAN16Q9H4T2 348 aaPredicted RBP18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 RRP15Q9Y3B9 282 aaKnown RBP18.38■□□□□ 0.53
PPP6R1-204ENST00000587457 RIC1Q4ADV7 1423 aa18.37■□□□□ 0.53
PPP6R1-204ENST00000587457 ADAM21Q9UKJ8 722 aa18.37■□□□□ 0.53
PPP6R1-204ENST00000587457 FANCGO15287 622 aa18.37■□□□□ 0.53
PPP6R1-204ENST00000587457 CAMTA2O94983 1202 aa18.37■□□□□ 0.53
PPP6R1-204ENST00000587457 ADD1P35611 737 aaKnown RBP18.37■□□□□ 0.53
PPP6R1-204ENST00000587457 SCARF1Q14162 830 aa18.37■□□□□ 0.53
PPP6R1-204ENST00000587457 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
PPP6R1-204ENST00000587457 USPL1Q5W0Q7 1092 aa18.37■□□□□ 0.53
PPP6R1-204ENST00000587457 RCOR1Q9UKL0 485 aa18.37■□□□□ 0.53
PPP6R1-204ENST00000587457 SH3TC1Q8TE82 1336 aa18.36■□□□□ 0.53
PPP6R1-204ENST00000587457 KCNQ4P56696 695 aa18.36■□□□□ 0.53
PPP6R1-204ENST00000587457 CTR9Q6PD62 1173 aa18.36■□□□□ 0.53
PPP6R1-204ENST00000587457 ENGASEQ8NFI3 743 aa18.36■□□□□ 0.53
PPP6R1-204ENST00000587457 EXOC4Q96A65 974 aa18.36■□□□□ 0.53
PPP6R1-204ENST00000587457 VPS72Q15906 364 aa18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 ALDH8A1Q9H2A2 487 aaPredicted RBP18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 HMG20BQ9P0W2 317 aa18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 ICE2Q659A1 982 aa18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 CHMP4CQ96CF2 233 aa18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 PSD3Q9NYI0 1048 aa18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 PARP3Q9Y6F1 533 aa18.35■□□□□ 0.53
PPP6R1-204ENST00000587457 CCP110O43303 1012 aa18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 FAM160A1Q05DH4 1040 aa18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 ZMYM1Q5SVZ6 1142 aa18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 PI16Q6UXB8 463 aa18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 ARFGAP3Q9NP61 516 aa18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 HELLSQ9NRZ9 838 aa18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 RNF113AO15541 343 aaKnown RBP18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 ACTN2P35609 894 aa18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 FSIP1Q8NA03 581 aa18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 GEMIN8Q9NWZ8 242 aaKnown RBP18.34■□□□□ 0.53
PPP6R1-204ENST00000587457 ZAP70P43403 619 aa18.33■□□□□ 0.53
PPP6R1-204ENST00000587457 FOSBP53539 338 aa18.33■□□□□ 0.53
PPP6R1-204ENST00000587457 GNL2Q13823 731 aaKnown RBP18.33■□□□□ 0.53
PPP6R1-204ENST00000587457 TSGA10IPQ3SY00 556 aa18.33■□□□□ 0.53
PPP6R1-204ENST00000587457 GPR161Q8N6U8 529 aaKnown RBP18.33■□□□□ 0.53
PPP6R1-204ENST00000587457 UTP14AQ9BVJ6 771 aaKnown RBP18.33■□□□□ 0.53
PPP6R1-204ENST00000587457 FUT8Q9BYC5 575 aa18.33■□□□□ 0.53
PPP6R1-204ENST00000587457 CYP21A2P08686 494 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms