RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	ZFYVE28	Q9HCC9	887 aa		11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	TMOD2	Q9NZR1	351 aa		11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	SUGT1	Q9Y2Z0	365 aa		11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	MAST3	O60307	1309 aa		11.96	□□□□□ -0.49
DDX42-215	ENST00000582985	SPDYE5	A6NIY4	337 aa		11.96	□□□□□ -0.49
DDX42-215	ENST00000582985		E9PSI1	815 aa		11.96	□□□□□ -0.49
DDX42-215	ENST00000582985	FKBP1C	Q5VVH2	108 aa		11.96	□□□□□ -0.49
DDX42-215	ENST00000582985	FAM83A	Q86UY5	434 aa		11.96	□□□□□ -0.49
DDX42-215	ENST00000582985	ERO1B	Q86YB8	467 aa		11.96	□□□□□ -0.49
DDX42-215	ENST00000582985	WRNIP1	Q96S55	665 aa		11.96	□□□□□ -0.49
DDX42-215	ENST00000582985	SNCAIP	Q9Y6H5	919 aa		11.96	□□□□□ -0.49
DDX42-215	ENST00000582985	CENPF	P49454	3210 aa		11.96	□□□□□ -0.5
DDX42-215	ENST00000582985	EYA2	O00167	538 aa		11.95	□□□□□ -0.5
DDX42-215	ENST00000582985	CETP	P11597	493 aa		11.95	□□□□□ -0.5
DDX42-215	ENST00000582985	RFX5	P48382	616 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX42-215	ENST00000582985	ARHGEF6	Q15052	776 aa		11.95	□□□□□ -0.5
DDX42-215	ENST00000582985	HHIPL2	Q6UWX4	724 aa		11.95	□□□□□ -0.5
DDX42-215	ENST00000582985	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX42-215	ENST00000582985	HOOK2	Q96ED9	719 aa		11.95	□□□□□ -0.5
DDX42-215	ENST00000582985	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.95	□□□□□ -0.5
DDX42-215	ENST00000582985	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	IRF6	O14896	467 aa		11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	SLC5A1	P13866	664 aa		11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	EN2	P19622	333 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	SNAPC2	Q13487	334 aa		11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	DCAF15	Q66K64	600 aa		11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	WDR66	Q8TBY9	1149 aa		11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	LPIN2	Q92539	896 aa		11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	ZNF333	Q96JL9	665 aa		11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	PTCH2	Q9Y6C5	1203 aa		11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	MKI67	P46013	3256 aa	Known RBP	11.94	□□□□□ -0.5
DDX42-215	ENST00000582985	KIAA0100	Q14667	2235 aa	Known RBP	11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	BTBD19	C9JJ37	291 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	TLR2	O60603	784 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	WDHD1	O75717	1129 aa	Predicted RBP	11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	SLFN5	Q08AF3	891 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	PPIL2	Q13356	520 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	SLC9C1	Q4G0N8	1177 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	MIGA2	Q7L4E1	593 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	ATG9A	Q7Z3C6	839 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	GCC1	Q96CN9	775 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	TMEM106C	Q9BVX2	250 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	ZNF341	Q9BYN7	854 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	ZCCHC17	Q9NP64	241 aa	Known RBP	11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	BRCA2	P51587	3418 aa		11.93	□□□□□ -0.5
DDX42-215	ENST00000582985	INPP5B	P32019	993 aa		11.92	□□□□□ -0.5
DDX42-215	ENST00000582985	PPAT	Q06203	517 aa		11.92	□□□□□ -0.5
DDX42-215	ENST00000582985	ALDH1L2	Q3SY69	923 aa		11.92	□□□□□ -0.5
DDX42-215	ENST00000582985	NBPF11	Q86T75	865 aa		11.92	□□□□□ -0.5
DDX42-215	ENST00000582985	FAM151A	Q8WW52	585 aa		11.92	□□□□□ -0.5
DDX42-215	ENST00000582985	ARHGAP39	Q9C0H5	1083 aa		11.92	□□□□□ -0.5
DDX42-215	ENST00000582985	DAGLA	Q9Y4D2	1042 aa		11.92	□□□□□ -0.5
DDX42-215	ENST00000582985	SPDYE4	A6NLX3	237 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	CIAO1	O76071	339 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	PRDX5	P30044	214 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	LACTB	P83111	547 aa	Predicted RBP	11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	TCP10	Q12799	353 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	KIF22	Q14807	665 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	DIXDC1	Q155Q3	683 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	ATP2B3	Q16720	1220 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	CDC42EP5	Q6NZY7	148 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	SIL1	Q9H173	461 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	SMC4	Q9NTJ3	1288 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	FBXO3	Q9UK99	471 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	MYH13	Q9UKX3	1938 aa		11.91	□□□□□ -0.5
DDX42-215	ENST00000582985	LDHB	P07195	334 aa	Known RBP	11.9	□□□□□ -0.5
DDX42-215	ENST00000582985	UBTFL1	P0CB47	393 aa	Predicted RBP	11.9	□□□□□ -0.5
DDX42-215	ENST00000582985	NFIA	Q12857	509 aa		11.9	□□□□□ -0.5
DDX42-215	ENST00000582985	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.9	□□□□□ -0.5
DDX42-215	ENST00000582985	CDCA7L	Q96GN5	454 aa		11.9	□□□□□ -0.5
DDX42-215	ENST00000582985	GNL3L	Q9NVN8	582 aa	Known RBP	11.9	□□□□□ -0.5
DDX42-215	ENST00000582985	CEP126	Q9P2H0	1117 aa		11.9	□□□□□ -0.5
DDX42-215	ENST00000582985	ZNF112	Q9UJU3	913 aa		11.9	□□□□□ -0.5
DDX42-215	ENST00000582985	ZSWIM8	A7E2V4	1837 aa		11.9	□□□□□ -0.5
DDX42-215	ENST00000582985	MYC	P01106	439 aa	Predicted RBP	11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	GNRH1	P01148	92 aa		11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	SLC4A8	Q2Y0W8	1093 aa		11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	HABP4	Q5JVS0	413 aa	Known RBP	11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	C17orf99	Q6UX52	265 aa		11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	ANKRD23	Q86SG2	305 aa		11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	SH3TC2	Q8TF17	1288 aa		11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	USP40	Q9NVE5	1235 aa		11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	FAM198A	Q9UFP1	575 aa		11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	KCNH4	Q9UQ05	1017 aa		11.89	□□□□□ -0.51
DDX42-215	ENST00000582985	SALL1	Q9NSC2	1324 aa		11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	PDHX	O00330	501 aa		11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	SEMA3E	O15041	775 aa		11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	IL15	P40933	162 aa	Predicted RBP	11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	PHKA1	P46020	1223 aa		11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	PRMT2	P55345	433 aa		11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	NOL9	Q5SY16	702 aa	Known RBP	11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	TRMT2A	Q8IZ69	625 aa	Known RBP	11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	ZNF579	Q8NAF0	562 aa	Known RBP	11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	CPA4	Q9UI42	421 aa		11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	DENND2A	Q9ULE3	1009 aa		11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	NOB1	Q9ULX3	412 aa	Known RBP	11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	PA2G4	Q9UQ80	394 aa	Known RBP	11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	LRRFIP2	Q9Y608	721 aa	Known RBP	11.88	□□□□□ -0.51
DDX42-215	ENST00000582985	ADGRA2	Q96PE1	1338 aa		11.87	□□□□□ -0.51
DDX42-215	ENST00000582985	ECM2	O94769	699 aa	Predicted RBP	11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms