RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 ANKRD23Q86SG2 305 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 VGLL2Q8N8G2 317 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 SRCIN1Q9C0H9 1055 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 RBM27Q9P2N5 1060 aaKnown RBP12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 SRRDQ9UH36 339 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 ZNF112Q9UJU3 913 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 SUGT1Q9Y2Z0 365 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 PDE8BO95263 885 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 OSBPP22059 807 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 BCAMP50895 628 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 MOGSQ13724 837 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 RABL6Q3YEC7 729 aaPredicted RBP12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 DCAF15Q66K64 600 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 MIGA2Q7L4E1 593 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 DPF3Q92784 378 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 PRO3102Q9H379 93 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 TMOD2Q9NZR1 351 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 KCNH4Q9UQ05 1017 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 ADGRA2Q96PE1 1338 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 ZSWIM8A7E2V4 1837 aa12.58□□□□□ -0.4
CALCOCO2-227ENST00000575560 PDHXO00330 501 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 GJB1P08034 283 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 HOXD10P28358 340 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 INPP5BP32019 993 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 GRK4P32298 578 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 GJA8P48165 433 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 METTL24Q5JXM2 366 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 SLC4A10Q6U841 1118 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 NKX2-3Q8TAU0 364 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 FAM151AQ8WW52 585 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 ZNF341Q9BYN7 854 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 BICC1Q9H694 974 aaKnown RBP12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 LAMA3Q16787 3333 aa12.57□□□□□ -0.4
CALCOCO2-227ENST00000575560 RPAP1Q9BWH6 1393 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO2-227ENST00000575560 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO2-227ENST00000575560 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO2-227ENST00000575560 CCL5P13501 91 aa12.56□□□□□ -0.4
CALCOCO2-227ENST00000575560 FGFR2P21802 821 aa12.56□□□□□ -0.4
CALCOCO2-227ENST00000575560 ANKRD44Q8N8A2 993 aa12.56□□□□□ -0.4
CALCOCO2-227ENST00000575560 SALL2Q9Y467 1007 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO2-227ENST00000575560 MAST3O60307 1309 aa12.56□□□□□ -0.4
CALCOCO2-227ENST00000575560 KIF16BQ96L93 1317 aa12.56□□□□□ -0.4
CALCOCO2-227ENST00000575560 BCRP11274 1271 aa12.55□□□□□ -0.4
CALCOCO2-227ENST00000575560 NOL9Q5SY16 702 aaKnown RBP12.55□□□□□ -0.4
CALCOCO2-227ENST00000575560 GPAT2Q6NUI2 795 aa12.55□□□□□ -0.4
CALCOCO2-227ENST00000575560 RAET1EQ8TD07 263 aa12.55□□□□□ -0.4
CALCOCO2-227ENST00000575560 CDC42EP5Q6NZY7 148 aa12.54□□□□□ -0.4
CALCOCO2-227ENST00000575560 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
CALCOCO2-227ENST00000575560 HTATIP2Q9BUP3 242 aa12.54□□□□□ -0.4
CALCOCO2-227ENST00000575560 RNF208Q9H0X6 261 aa12.54□□□□□ -0.4
CALCOCO2-227ENST00000575560 MYPNQ86TC9 1320 aa12.54□□□□□ -0.4
CALCOCO2-227ENST00000575560 CXCL11O14625 94 aa12.53□□□□□ -0.4
CALCOCO2-227ENST00000575560 IFIT1P09914 478 aaKnown RBP12.53□□□□□ -0.4
CALCOCO2-227ENST00000575560 PRKCZQ05513 592 aa12.53□□□□□ -0.4
CALCOCO2-227ENST00000575560 TCP10Q12799 353 aa12.53□□□□□ -0.4
CALCOCO2-227ENST00000575560 PUM3Q15397 648 aaKnown RBP12.53□□□□□ -0.4
CALCOCO2-227ENST00000575560 WDR66Q8TBY9 1149 aa12.53□□□□□ -0.4
CALCOCO2-227ENST00000575560 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
CALCOCO2-227ENST00000575560 ZBTB7BO15156 539 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 SGPL1O95470 568 aa12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 CYP2C8P10632 490 aa12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 FCGRTP55899 365 aa12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 UBXN2AP68543 259 aa12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 NFIAQ12857 509 aa12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 U2AF1L4Q8WU68 220 aaKnown RBP12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 PARK7Q99497 189 aaKnown RBP12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 GABRQQ9UN88 632 aa12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 DAGLAQ9Y4D2 1042 aa12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 NR2E3Q9Y5X4 410 aa12.52□□□□□ -0.41
CALCOCO2-227ENST00000575560 PHF20L1A8MW92 1017 aa12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 CAPN2P17655 700 aa12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 RFX5P48382 616 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 ZFPM1Q8IX07 1006 aa12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 LPIN2Q92539 896 aa12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 UNC93B1Q9H1C4 597 aa12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 MRS2Q9HD23 443 aa12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 USP40Q9NVE5 1235 aa12.51□□□□□ -0.41
CALCOCO2-227ENST00000575560 A0A0G2JLL6 359 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 A0A1W2PPC1 479 aa12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 EYA2O00167 538 aa12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 FARP2O94887 1054 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 PRDX5P30044 214 aa12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 MAP3K10Q02779 954 aa12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 FASTKD5Q7L8L6 764 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 PRRT2Q7Z6L0 340 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 AFG3L2Q9Y4W6 797 aa12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 ZHX2Q9Y6X8 837 aa12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 ATRNL1Q5VV63 1379 aa12.5□□□□□ -0.41
CALCOCO2-227ENST00000575560 ADCY3O60266 1144 aa12.49□□□□□ -0.41
CALCOCO2-227ENST00000575560 SLC5A1P13866 664 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms