RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 MVPQ14764 893 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 FAM83AQ86UY5 434 aa11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 ZNF296Q8WUU4 475 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 MRIQ9BWK5 157 aa11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 ABCF2Q9UG63 623 aa11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 SALL1Q9NSC2 1324 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 PNMA6EA0A0J9YXQ4 647 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 GPR25O00155 361 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 FKTNO75072 461 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 GJA5P36382 358 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 TCP10Q12799 353 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 RASGRF1Q13972 1273 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 VGLL4Q14135 290 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 DCAF15Q66K64 600 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 WRNIP1Q96S55 665 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 C1orf115Q9H7X2 142 aa11.92□□□□□ -0.5
NPLOC4-216ENST00000574344 ATAD5Q96QE3 1844 aa11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 IGF2BP3O00425 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 CDC42EP5Q6NZY7 148 aa11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 SLF2Q8IX21 1173 aa11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 USP40Q9NVE5 1235 aa11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 DOCK1Q14185 1865 aa11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 CDK5RAP2Q96SN8 1893 aa11.91□□□□□ -0.5
NPLOC4-216ENST00000574344 ERICH6Q7L0X2 663 aa11.9□□□□□ -0.5
NPLOC4-216ENST00000574344 MIGA2Q7L4E1 593 aa11.9□□□□□ -0.5
NPLOC4-216ENST00000574344 FAM151AQ8WW52 585 aa11.9□□□□□ -0.5
NPLOC4-216ENST00000574344 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
NPLOC4-216ENST00000574344 ZNF341Q9BYN7 854 aa11.9□□□□□ -0.5
NPLOC4-216ENST00000574344 R3HDMLQ9H3Y0 253 aa11.9□□□□□ -0.5
NPLOC4-216ENST00000574344 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 CCL15-CCL14A0A0B4J2E2 113 aa11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 GTF2A2P52657 109 aa11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 NFIAQ12857 509 aa11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 PKN2Q16513 984 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 CCL15Q16663 113 aa11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 NOM1Q5C9Z4 860 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 ZSCAN29Q8IWY8 852 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 ZKSCAN4Q969J2 545 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 CFHR5Q9BXR6 569 aa11.89□□□□□ -0.51
NPLOC4-216ENST00000574344 MROH7-TTC4A0A0A0MT08 1334 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 FOCADQ5VW36 1801 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 PTPRFP10586 1907 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 SURF6O75683 361 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 RLBP1P12271 317 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 BTDP43251 543 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 SOX10P56693 466 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 MLLT1Q03111 559 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 CRHR2Q13324 411 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 TAF1CQ15572 869 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 TTC39AQ5SRH9 613 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 ERO1BQ86YB8 467 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 RAI14Q9P0K7 980 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 SNCAIPQ9Y6H5 919 aa11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-216ENST00000574344 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 UQCRFS1P1P0C7P4 283 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 INPP5BP32019 993 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 RGS3P49796 1198 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 MECOMQ03112 1051 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 PICALMQ13492 652 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 POLA2Q14181 598 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 ERO1AQ96HE7 468 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 HMG20BQ9P0W2 317 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 HPS5Q9UPZ3 1129 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 TRIM17Q9Y577 477 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 ZSWIM8A7E2V4 1837 aa11.87□□□□□ -0.51
NPLOC4-216ENST00000574344 GAKO14976 1311 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 TNRC18O15417 2968 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 ZBTB22O15209 634 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 CETPP11597 493 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 MCAMP43121 646 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 GSTO1P78417 241 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 SNAPC2Q13487 334 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 TNNI3KQ59H18 835 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 CCDC158Q5M9N0 1113 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 FBXO46Q6PJ61 603 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 CD99L2Q8TCZ2 262 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 PANK1Q8TE04 598 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 SSH3Q8TE77 659 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 PTPN18Q99952 460 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 ZFYVE28Q9HCC9 887 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms