RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 CFHR5Q9BXR6 569 aa11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 USP40Q9NVE5 1235 aa11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 AK9Q5TCS8 1911 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 CCL15-CCL14A0A0B4J2E2 113 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 IGF2BP3O00425 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 ADORA1P30542 326 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 GTF2A2P52657 109 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 MTX1Q13505 466 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 VGLL4Q14135 290 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 CCL15Q16663 113 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 TMEM57Q8N5G2 664 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 FAM151AQ8WW52 585 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 XAGE2Q96GT9 111 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 ZNF341Q9BYN7 854 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 TNNQ9UQP3 1299 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 DAGLAQ9Y4D2 1042 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 SALL1Q9NSC2 1324 aa11.03□□□□□ -0.64
NPLOC4-204ENST00000570324 GJA5P36382 358 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 SOX10P56693 466 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 CDC42EP5Q6NZY7 148 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 ERICH6Q7L0X2 663 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 MIGA2Q7L4E1 593 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 ERO1BQ86YB8 467 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 ZKSCAN4Q969J2 545 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 ERO1AQ96HE7 468 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 R3HDMLQ9H3Y0 253 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 ZFYVE28Q9HCC9 887 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.65
NPLOC4-204ENST00000570324 OTOFQ9HC10 1997 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 TESPA1A2RU30 521 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 SPDYE5A6NIY4 337 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 CETPP11597 493 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 RGS19P49795 217 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 CRHR2Q13324 411 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 RASGRF1Q13972 1273 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 ARHGEF6Q15052 776 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 TAF1CQ15572 869 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 FBXO46Q6PJ61 603 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 CNKSR2Q8WXI2 1034 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 TRIM17Q9Y577 477 aa11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 RPAP1Q9BWH6 1393 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-204ENST00000570324 PNMA6EA0A0J9YXQ4 647 aa11□□□□□ -0.65
NPLOC4-204ENST00000570324 LDHCP07864 332 aa11□□□□□ -0.65
NPLOC4-204ENST00000570324 GSTO1P78417 241 aa11□□□□□ -0.65
NPLOC4-204ENST00000570324 SP3Q02447 781 aa11□□□□□ -0.65
NPLOC4-204ENST00000570324 SNAPC2Q13487 334 aa11□□□□□ -0.65
NPLOC4-204ENST00000570324 NOL10Q9BSC4 688 aaKnown RBP11□□□□□ -0.65
NPLOC4-204ENST00000570324 RAI14Q9P0K7 980 aa11□□□□□ -0.65
NPLOC4-204ENST00000570324 ZBTB22O15209 634 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 ENTPD3O75355 529 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 SURF6O75683 361 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 UQCRFS1P1P0C7P4 283 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 BTDP43251 543 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 RGS3P49796 1198 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 NFIAQ12857 509 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 PPIL2Q13356 520 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 PICALMQ13492 652 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 CCDC158Q5M9N0 1113 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 TTC39AQ5SRH9 613 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 SPATA5Q8NB90 893 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 BRI3BPQ8WY22 251 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 PTPN18Q99952 460 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 EFCC1Q9HA90 598 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 LRP2BPQ9P2M1 347 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 SNCAIPQ9Y6H5 919 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 PDS5AQ29RF7 1337 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 MYH2Q9UKX2 1941 aa10.99□□□□□ -0.65
NPLOC4-204ENST00000570324 IRF6O14896 467 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 MS4A1P11836 297 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 INPP5BP32019 993 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 ATP8B2P98198 1209 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 MECOMQ03112 1051 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 PPATQ06203 517 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 KIF22Q14807 665 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 OTOP1Q7RTM1 612 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 C1orf115Q9H7X2 142 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 PICK1Q9NRD5 415 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 HMG20BQ9P0W2 317 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 FAM198AQ9UFP1 575 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 MROH7-TTC4A0A0A0MT08 1334 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 ZBED9Q6R2W3 1325 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 LAMB1P07942 1786 aa10.98□□□□□ -0.65
NPLOC4-204ENST00000570324 TBC1D9Q6ZT07 1266 aa10.97□□□□□ -0.65
NPLOC4-204ENST00000570324 ZFPM1Q8IX07 1006 aa10.97□□□□□ -0.65
NPLOC4-204ENST00000570324 FAM43AQ8N2R8 423 aa10.97□□□□□ -0.65
NPLOC4-204ENST00000570324 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-204ENST00000570324 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-204ENST00000570324 IDI2Q9BXS1 227 aa10.97□□□□□ -0.65
NPLOC4-204ENST00000570324 GPR108Q9NPR9 543 aa10.97□□□□□ -0.65
NPLOC4-204ENST00000570324 GAKO14976 1311 aa10.97□□□□□ -0.65
NPLOC4-204ENST00000570324 ARID4AP29374 1257 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-204ENST00000570324 POLA2Q14181 598 aa10.96□□□□□ -0.65
NPLOC4-204ENST00000570324 TNNI3KQ59H18 835 aa10.96□□□□□ -0.65
NPLOC4-204ENST00000570324 SSH3Q8TE77 659 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms