RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 CRISPLD2Q9H0B8 497 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 MTMR10Q9NXD2 777 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 SUGT1Q9Y2Z0 365 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 MAST3O60307 1309 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 LAMA3Q16787 3333 aa11.02□□□□□ -0.65
SMG1-216ENST00000569122 LAMB1P07942 1786 aa11.01□□□□□ -0.65
SMG1-216ENST00000569122 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
SMG1-216ENST00000569122 INHAP05111 366 aa11.01□□□□□ -0.65
SMG1-216ENST00000569122 BCRP11274 1271 aa11.01□□□□□ -0.65
SMG1-216ENST00000569122 CASP7P55210 303 aa11.01□□□□□ -0.65
SMG1-216ENST00000569122 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMG1-216ENST00000569122 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
SMG1-216ENST00000569122 COA7Q96BR5 231 aa11.01□□□□□ -0.65
SMG1-216ENST00000569122 PAWRQ96IZ0 340 aaKnown RBP11.01□□□□□ -0.65
SMG1-216ENST00000569122 ZDHHC15Q96MV8 337 aa11.01□□□□□ -0.65
SMG1-216ENST00000569122 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
SMG1-216ENST00000569122 ADAMTS8Q9UP79 889 aa11.01□□□□□ -0.65
SMG1-216ENST00000569122 ZNF646O15015 1829 aaPredicted RBP11□□□□□ -0.65
SMG1-216ENST00000569122 SLC4A2P04920 1241 aa11□□□□□ -0.65
SMG1-216ENST00000569122 FLT3LGP49771 235 aa11□□□□□ -0.65
SMG1-216ENST00000569122 CAVIN4Q5BKX8 364 aa11□□□□□ -0.65
SMG1-216ENST00000569122 DNAAF4Q8WXU2 420 aa11□□□□□ -0.65
SMG1-216ENST00000569122 NBPF3Q9H094 633 aa11□□□□□ -0.65
SMG1-216ENST00000569122 ZNF112Q9UJU3 913 aa11□□□□□ -0.65
SMG1-216ENST00000569122 SLC45A1Q9Y2W3 748 aa11□□□□□ -0.65
SMG1-216ENST00000569122 MYBBP1AQ9BQG0 1328 aaKnown RBP11□□□□□ -0.65
SMG1-216ENST00000569122 TNPO2O14787 897 aaKnown RBP10.99□□□□□ -0.65
SMG1-216ENST00000569122 NOL9Q5SY16 702 aaKnown RBP10.99□□□□□ -0.65
SMG1-216ENST00000569122 FAM109BQ6ICB4 259 aaPredicted RBP10.99□□□□□ -0.65
SMG1-216ENST00000569122 FAM151AQ8WW52 585 aa10.99□□□□□ -0.65
SMG1-216ENST00000569122 FAM84BQ96KN1 310 aaPredicted RBP10.99□□□□□ -0.65
SMG1-216ENST00000569122 UBE2OQ9C0C9 1292 aaKnown RBP10.99□□□□□ -0.65
SMG1-216ENST00000569122 GABRQQ9UN88 632 aa10.99□□□□□ -0.65
SMG1-216ENST00000569122 RPAP1Q9BWH6 1393 aaPredicted RBP10.99□□□□□ -0.65
SMG1-216ENST00000569122 GYG1P46976 350 aa10.98□□□□□ -0.65
SMG1-216ENST00000569122 BCAMP50895 628 aa10.98□□□□□ -0.65
SMG1-216ENST00000569122 FLIIQ13045 1269 aa10.98□□□□□ -0.65
SMG1-216ENST00000569122 FKBP5Q13451 457 aaPredicted RBP10.98□□□□□ -0.65
SMG1-216ENST00000569122 HHIPL2Q6UWX4 724 aa10.98□□□□□ -0.65
SMG1-216ENST00000569122 LMBR1LQ6UX01 489 aa10.98□□□□□ -0.65
SMG1-216ENST00000569122 Q7L0L9 218 aa10.98□□□□□ -0.65
SMG1-216ENST00000569122 MIGA2Q7L4E1 593 aa10.98□□□□□ -0.65
SMG1-216ENST00000569122 C7orf61Q8IZ16 206 aa10.98□□□□□ -0.65
SMG1-216ENST00000569122 SMCR8Q8TEV9 937 aaPredicted RBP10.98□□□□□ -0.65
SMG1-216ENST00000569122 CYP2C8P10632 490 aa10.97□□□□□ -0.65
SMG1-216ENST00000569122 ELNP15502 786 aa10.97□□□□□ -0.65
SMG1-216ENST00000569122 INPP5BP32019 993 aa10.97□□□□□ -0.65
SMG1-216ENST00000569122 MAGEA10P43363 369 aaPredicted RBP10.97□□□□□ -0.65
SMG1-216ENST00000569122 CACNB3P54284 484 aa10.97□□□□□ -0.65
SMG1-216ENST00000569122 FOXO4P98177 505 aa10.97□□□□□ -0.65
SMG1-216ENST00000569122 APOBEC3HQ6NTF7 200 aaKnown RBP10.97□□□□□ -0.65
SMG1-216ENST00000569122 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMG1-216ENST00000569122 PICK1Q9NRD5 415 aa10.97□□□□□ -0.65
SMG1-216ENST00000569122 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
SMG1-216ENST00000569122 MROH5Q6ZUA9 1318 aa10.97□□□□□ -0.65
SMG1-216ENST00000569122 RPTORQ8N122 1335 aa10.97□□□□□ -0.65
SMG1-216ENST00000569122 APAF1O14727 1248 aa10.96□□□□□ -0.65
SMG1-216ENST00000569122 CHAF1AQ13111 956 aaPredicted RBP10.96□□□□□ -0.65
SMG1-216ENST00000569122 MOGSQ13724 837 aa10.96□□□□□ -0.65
SMG1-216ENST00000569122 TWISTNBQ3B726 338 aaPredicted RBP10.96□□□□□ -0.65
SMG1-216ENST00000569122 GPAT2Q6NUI2 795 aa10.96□□□□□ -0.65
SMG1-216ENST00000569122 FBXO33Q7Z6M2 555 aa10.96□□□□□ -0.65
SMG1-216ENST00000569122 TSPYL6Q8N831 410 aa10.96□□□□□ -0.65
SMG1-216ENST00000569122 SYMPKQ92797 1274 aaKnown RBP10.96□□□□□ -0.65
SMG1-216ENST00000569122 C11orf49Q9H6J7 331 aa10.96□□□□□ -0.65
SMG1-216ENST00000569122 HMX1Q9NP08 348 aaPredicted RBP10.96□□□□□ -0.65
SMG1-216ENST00000569122 PRDM6Q9NQX0 595 aa10.96□□□□□ -0.65
SMG1-216ENST00000569122 PNMA3Q9UL41 463 aa10.96□□□□□ -0.65
SMG1-216ENST00000569122 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
SMG1-216ENST00000569122 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
SMG1-216ENST00000569122 HMGCRP04035 888 aa10.95□□□□□ -0.66
SMG1-216ENST00000569122 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
SMG1-216ENST00000569122 ZHX2Q9Y6X8 837 aa10.95□□□□□ -0.66
SMG1-216ENST00000569122 POTEB2H3BUK9 544 aa10.94□□□□□ -0.66
SMG1-216ENST00000569122 ZEB1P37275 1124 aaPredicted RBP10.94□□□□□ -0.66
SMG1-216ENST00000569122 FAM110CQ1W6H9 321 aa10.94□□□□□ -0.66
SMG1-216ENST00000569122 GADL1Q6ZQY3 521 aa10.94□□□□□ -0.66
SMG1-216ENST00000569122 G2E3Q7L622 706 aa10.94□□□□□ -0.66
SMG1-216ENST00000569122 SCYL3Q8IZE3 742 aa10.94□□□□□ -0.66
SMG1-216ENST00000569122 WDR66Q8TBY9 1149 aa10.94□□□□□ -0.66
SMG1-216ENST00000569122 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
SMG1-216ENST00000569122 C9orf78Q9NZ63 289 aaPredicted RBP10.94□□□□□ -0.66
SMG1-216ENST00000569122 ECM29Q5VYK3 1845 aa10.93□□□□□ -0.66
SMG1-216ENST00000569122 GRM8O00222 908 aa10.93□□□□□ -0.66
SMG1-216ENST00000569122 SYN1P17600 705 aa10.93□□□□□ -0.66
SMG1-216ENST00000569122 GCLCP48506 637 aaPredicted RBP10.93□□□□□ -0.66
SMG1-216ENST00000569122 PABPC4Q13310 644 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMG1-216ENST00000569122 DIS3LQ8TF46 1054 aaKnown RBP10.93□□□□□ -0.66
SMG1-216ENST00000569122 OGDHLQ9ULD0 1010 aa10.93□□□□□ -0.66
SMG1-216ENST00000569122 UNC80Q8N2C7 3258 aa10.92□□□□□ -0.66
SMG1-216ENST00000569122 PTPRAP18433 802 aa10.92□□□□□ -0.66
SMG1-216ENST00000569122 TCP10Q12799 353 aa10.92□□□□□ -0.66
SMG1-216ENST00000569122 METTL24Q5JXM2 366 aa10.92□□□□□ -0.66
SMG1-216ENST00000569122 BEND3Q5T5X7 828 aa10.92□□□□□ -0.66
SMG1-216ENST00000569122 ZNF697Q5TEC3 545 aa10.92□□□□□ -0.66
SMG1-216ENST00000569122 TRMT44Q8IYL2 757 aaKnown RBP10.92□□□□□ -0.66
SMG1-216ENST00000569122 LBHD1Q9BQE6 289 aaPredicted RBP10.92□□□□□ -0.66
SMG1-216ENST00000569122 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
SMG1-216ENST00000569122 AFG3L2Q9Y4W6 797 aa10.92□□□□□ -0.66
SMG1-216ENST00000569122 LRRFIP2Q9Y608 721 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms