RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 HOOK2Q96ED9 719 aa23.46■■□□□ 1.35
SPSB3-210ENST00000568416 A0A1B0GUL7 405 aa23.45■■□□□ 1.34
SPSB3-210ENST00000568416 SPDYE5A6NIY4 337 aa23.45■■□□□ 1.34
SPSB3-210ENST00000568416 GNAI2P04899 355 aa23.45■■□□□ 1.34
SPSB3-210ENST00000568416 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
SPSB3-210ENST00000568416 FBXO46Q6PJ61 603 aaPredicted RBP23.45■■□□□ 1.34
SPSB3-210ENST00000568416 AKAP2Q9Y2D5 859 aa23.45■■□□□ 1.34
SPSB3-210ENST00000568416 SNCAIPQ9Y6H5 919 aa23.45■■□□□ 1.34
SPSB3-210ENST00000568416 MYH13Q9UKX3 1938 aa23.45■■□□□ 1.34
SPSB3-210ENST00000568416 PDS5AQ29RF7 1337 aaKnown RBP23.44■■□□□ 1.34
SPSB3-210ENST00000568416 SOX10P56693 466 aa23.44■■□□□ 1.34
SPSB3-210ENST00000568416 CRHR2Q13324 411 aa23.44■■□□□ 1.34
SPSB3-210ENST00000568416 BRI3BPQ8WY22 251 aa23.44■■□□□ 1.34
SPSB3-210ENST00000568416 WRNIP1Q96S55 665 aa23.44■■□□□ 1.34
SPSB3-210ENST00000568416 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.44■■□□□ 1.34
SPSB3-210ENST00000568416 GTF2A2P52657 109 aa23.43■■□□□ 1.34
SPSB3-210ENST00000568416 NFIAQ12857 509 aa23.43■■□□□ 1.34
SPSB3-210ENST00000568416 RASGRF1Q13972 1273 aa23.43■■□□□ 1.34
SPSB3-210ENST00000568416 ZKSCAN2Q63HK3 967 aa23.43■■□□□ 1.34
SPSB3-210ENST00000568416 DCAF15Q66K64 600 aa23.43■■□□□ 1.34
SPSB3-210ENST00000568416 ZGPATQ8N5A5 531 aaKnown RBP23.43■■□□□ 1.34
SPSB3-210ENST00000568416 TMEM57Q8N5G2 664 aa23.43■■□□□ 1.34
SPSB3-210ENST00000568416 OTUD5Q96G74 571 aa23.43■■□□□ 1.34
SPSB3-210ENST00000568416 XAGE2Q96GT9 111 aa23.43■■□□□ 1.34
SPSB3-210ENST00000568416 PNMA6EA0A0J9YXQ4 647 aa23.42■■□□□ 1.34
SPSB3-210ENST00000568416 DIEXFQ68CQ4 756 aaKnown RBP23.42■■□□□ 1.34
SPSB3-210ENST00000568416 ZKSCAN4Q969J2 545 aaPredicted RBP23.42■■□□□ 1.34
SPSB3-210ENST00000568416 ZNF341Q9BYN7 854 aa23.42■■□□□ 1.34
SPSB3-210ENST00000568416 USP40Q9NVE5 1235 aa23.42■■□□□ 1.34
SPSB3-210ENST00000568416 FAM198AQ9UFP1 575 aa23.42■■□□□ 1.34
SPSB3-210ENST00000568416 GAKO14976 1311 aa23.41■■□□□ 1.34
SPSB3-210ENST00000568416 CCL15-CCL14A0A0B4J2E2 113 aa23.41■■□□□ 1.34
SPSB3-210ENST00000568416 MVPQ14764 893 aaKnown RBP23.41■■□□□ 1.34
SPSB3-210ENST00000568416 CCL15Q16663 113 aa23.41■■□□□ 1.34
SPSB3-210ENST00000568416 ERO1BQ86YB8 467 aa23.41■■□□□ 1.34
SPSB3-210ENST00000568416 TCP10Q12799 353 aa23.4■■□□□ 1.34
SPSB3-210ENST00000568416 MIGA2Q7L4E1 593 aa23.4■■□□□ 1.34
SPSB3-210ENST00000568416 OTOP1Q7RTM1 612 aa23.39■■□□□ 1.33
SPSB3-210ENST00000568416 ERO1AQ96HE7 468 aa23.39■■□□□ 1.33
SPSB3-210ENST00000568416 ABCF2Q9UG63 623 aa23.39■■□□□ 1.33
SPSB3-210ENST00000568416 ZNF112Q9UJU3 913 aa23.39■■□□□ 1.33
SPSB3-210ENST00000568416 TRIM17Q9Y577 477 aa23.39■■□□□ 1.33
SPSB3-210ENST00000568416 INPP5BP32019 993 aa23.38■■□□□ 1.33
SPSB3-210ENST00000568416 FAM43AQ8N2R8 423 aa23.38■■□□□ 1.33
SPSB3-210ENST00000568416 CD99L2Q8TCZ2 262 aa23.38■■□□□ 1.33
SPSB3-210ENST00000568416 FAM163AQ96GL9 167 aaPredicted RBP23.38■■□□□ 1.33
SPSB3-210ENST00000568416 NEUROD6Q96NK8 337 aa23.38■■□□□ 1.33
SPSB3-210ENST00000568416 IDI2Q9BXS1 227 aa23.38■■□□□ 1.33
SPSB3-210ENST00000568416 IRF6O14896 467 aa23.37■■□□□ 1.33
SPSB3-210ENST00000568416 SP3Q02447 781 aa23.37■■□□□ 1.33
SPSB3-210ENST00000568416 G3BP1Q13283 466 aaKnown RBP eCLIP23.37■■□□□ 1.33
SPSB3-210ENST00000568416 PPIL2Q13356 520 aa23.37■■□□□ 1.33
SPSB3-210ENST00000568416 SPTY2D1Q68D10 685 aaPredicted RBP23.37■■□□□ 1.33
SPSB3-210ENST00000568416 DZIP1Q86YF9 867 aaKnown RBP23.37■■□□□ 1.33
SPSB3-210ENST00000568416 ZFPM1Q8IX07 1006 aa23.37■■□□□ 1.33
SPSB3-210ENST00000568416 RFX7Q2KHR2 1363 aa23.37■■□□□ 1.33
SPSB3-210ENST00000568416 ENTPD3O75355 529 aa23.36■■□□□ 1.33
SPSB3-210ENST00000568416 CETPP11597 493 aa23.36■■□□□ 1.33
SPSB3-210ENST00000568416 PPATQ06203 517 aa23.36■■□□□ 1.33
SPSB3-210ENST00000568416 POLA2Q14181 598 aa23.36■■□□□ 1.33
SPSB3-210ENST00000568416 TAF1CQ15572 869 aaPredicted RBP23.36■■□□□ 1.33
SPSB3-210ENST00000568416 SLF2Q8IX21 1173 aa23.36■■□□□ 1.33
SPSB3-210ENST00000568416 ZFYVE28Q9HCC9 887 aa23.36■■□□□ 1.33
SPSB3-210ENST00000568416 HMG20BQ9P0W2 317 aa23.36■■□□□ 1.33
SPSB3-210ENST00000568416 ARID4AP29374 1257 aaPredicted RBP23.35■■□□□ 1.33
SPSB3-210ENST00000568416 RGS3P49796 1198 aa23.35■■□□□ 1.33
SPSB3-210ENST00000568416 SNAPC2Q13487 334 aa23.35■■□□□ 1.33
SPSB3-210ENST00000568416 ATRNL1Q5VV63 1379 aa23.35■■□□□ 1.33
SPSB3-210ENST00000568416 BTBD19C9JJ37 291 aa23.34■■□□□ 1.33
SPSB3-210ENST00000568416 BTDP43251 543 aa23.34■■□□□ 1.33
SPSB3-210ENST00000568416 ATP8B2P98198 1209 aa23.34■■□□□ 1.33
SPSB3-210ENST00000568416 CAP1Q01518 475 aa23.34■■□□□ 1.33
SPSB3-210ENST00000568416 NOL9Q5SY16 702 aaKnown RBP23.34■■□□□ 1.33
SPSB3-210ENST00000568416 ERICH6Q7L0X2 663 aa23.34■■□□□ 1.33
SPSB3-210ENST00000568416 SSH3Q8TE77 659 aa23.34■■□□□ 1.33
SPSB3-210ENST00000568416 ZNF384Q8TF68 577 aa23.34■■□□□ 1.33
SPSB3-210ENST00000568416 ZCCHC17Q9NP64 241 aaKnown RBP23.34■■□□□ 1.33
SPSB3-210ENST00000568416 MROH7-TTC4A0A0A0MT08 1334 aa23.33■■□□□ 1.33
SPSB3-210ENST00000568416 MECOMQ03112 1051 aa23.33■■□□□ 1.33
SPSB3-210ENST00000568416 GORABQ5T7V8 394 aa23.33■■□□□ 1.33
SPSB3-210ENST00000568416 PI16Q6UXB8 463 aa23.33■■□□□ 1.33
SPSB3-210ENST00000568416 SPATA5Q8NB90 893 aa23.33■■□□□ 1.33
SPSB3-210ENST00000568416 PTPN22Q9Y2R2 807 aa23.33■■□□□ 1.33
SPSB3-210ENST00000568416 GPR75-ASB3A0A0A6YYF3 556 aa23.32■■□□□ 1.32
SPSB3-210ENST00000568416 WDHD1O75717 1129 aaPredicted RBP23.32■■□□□ 1.32
SPSB3-210ENST00000568416 RLBP1P12271 317 aa23.32■■□□□ 1.32
SPSB3-210ENST00000568416 SH3BP5LQ7L8J4 393 aa23.32■■□□□ 1.32
SPSB3-210ENST00000568416 FTSJ3Q8IY81 847 aaKnown RBP23.32■■□□□ 1.32
SPSB3-210ENST00000568416 EFCC1Q9HA90 598 aa23.32■■□□□ 1.32
SPSB3-210ENST00000568416 GPR108Q9NPR9 543 aa23.32■■□□□ 1.32
SPSB3-210ENST00000568416 KCNH4Q9UQ05 1017 aa23.32■■□□□ 1.32
SPSB3-210ENST00000568416 ZBED9Q6R2W3 1325 aa23.32■■□□□ 1.32
SPSB3-210ENST00000568416 ZBTB7BO15156 539 aaPredicted RBP23.31■■□□□ 1.32
SPSB3-210ENST00000568416 DDX4Q9NQI0 724 aaKnown RBP23.31■■□□□ 1.32
SPSB3-210ENST00000568416 TLR2O60603 784 aa23.3■■□□□ 1.32
SPSB3-210ENST00000568416 UQCRFS1P1P0C7P4 283 aa23.3■■□□□ 1.32
SPSB3-210ENST00000568416 MCAMP43121 646 aa23.3■■□□□ 1.32
SPSB3-210ENST00000568416 RHBDL3P58872 404 aa23.3■■□□□ 1.32
SPSB3-210ENST00000568416 MAP3K10Q02779 954 aa23.3■■□□□ 1.32
SPSB3-210ENST00000568416 TBC1D9Q6ZT07 1266 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms