RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 EXOC4Q96A65 974 aa22.69■■□□□ 1.22
AC009041.2-204ENST00000568394 ACSBG1Q96GR2 724 aa22.69■■□□□ 1.22
AC009041.2-204ENST00000568394 SLC52A2Q9HAB3 445 aa22.69■■□□□ 1.22
AC009041.2-204ENST00000568394 ILDR1Q86SU0 546 aaPredicted RBP22.68■■□□□ 1.22
AC009041.2-204ENST00000568394 ABCB6Q9NP58 842 aa22.68■■□□□ 1.22
AC009041.2-204ENST00000568394 NCAPHQ15003 741 aa22.68■■□□□ 1.22
AC009041.2-204ENST00000568394 ICE2Q659A1 982 aa22.68■■□□□ 1.22
AC009041.2-204ENST00000568394 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
AC009041.2-204ENST00000568394 A0A0U1RQJ8 604 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 KIF5CO60282 957 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 AXDND1Q5T1B0 1012 aaPredicted RBP22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 ATRIPQ8WXE1 791 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 EFCC1Q9HA90 598 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 DDX21Q9NR30 783 aaKnown RBP eCLIP22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 RAI14Q9P0K7 980 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 SOWAHDA6NJG2 315 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 COBLO75128 1261 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 LRRC24Q50LG9 513 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 MYSM1Q5VVJ2 828 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 HDXQ7Z353 690 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 LINS1Q8NG48 757 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 IQSEC3Q9UPP2 1182 aaPredicted RBP22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 EIF3CLB5ME19 914 aaKnown RBP22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 IVLP07476 585 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 ANO1Q5XXA6 986 aa22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 EIF3CQ99613 913 aaKnown RBP22.67■■□□□ 1.22
AC009041.2-204ENST00000568394 NEURL1BA8MQ27 555 aa22.66■■□□□ 1.22
AC009041.2-204ENST00000568394 FOXN1O15353 648 aa22.66■■□□□ 1.22
AC009041.2-204ENST00000568394 ALDH1L1O75891 902 aa22.66■■□□□ 1.22
AC009041.2-204ENST00000568394 PPARDQ03181 441 aa22.66■■□□□ 1.22
AC009041.2-204ENST00000568394 RABGGTAQ92696 567 aa22.66■■□□□ 1.22
AC009041.2-204ENST00000568394 E7EWF7 191 aa22.66■■□□□ 1.22
AC009041.2-204ENST00000568394 TUBB4AP04350 444 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 GCKRQ14397 625 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 PPFIBP1Q86W92 1011 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 SMARCC2Q8TAQ2 1214 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 LLPHQ9BRT6 129 aaKnown RBP22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 RTEL1Q9NZ71 1219 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 TBC1D2BQ9UPU7 963 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 NFE2L3Q9Y4A8 694 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 MRFAP1Q9Y605 127 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 NPHP4O75161 1426 aaPredicted RBP22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 CARMIL3Q8ND23 1372 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 RALYLQ86SE5 291 aaKnown RBP22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 CCDC24Q8N4L8 307 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 APPP05067 770 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 VSTM4Q8IW00 320 aa22.65■■□□□ 1.22
AC009041.2-204ENST00000568394 USP42Q9H9J4 1324 aaKnown RBP22.64■■□□□ 1.22
AC009041.2-204ENST00000568394 FKBP15Q5T1M5 1219 aa22.64■■□□□ 1.22
AC009041.2-204ENST00000568394 PACS2Q86VP3 889 aa22.64■■□□□ 1.22
AC009041.2-204ENST00000568394 ANKRD26Q9UPS8 1709 aa22.64■■□□□ 1.22
AC009041.2-204ENST00000568394 ZMYND10O75800 440 aa22.64■■□□□ 1.21
AC009041.2-204ENST00000568394 MAP3K9P80192 1104 aa22.64■■□□□ 1.21
AC009041.2-204ENST00000568394 DNAJC21Q5F1R6 531 aaKnown RBP22.64■■□□□ 1.21
AC009041.2-204ENST00000568394 GRAMD1CQ8IYS0 662 aa22.64■■□□□ 1.21
AC009041.2-204ENST00000568394 PCDHA5Q9Y5H7 936 aa22.64■■□□□ 1.21
AC009041.2-204ENST00000568394 C3P01024 1663 aa22.64■■□□□ 1.21
AC009041.2-204ENST00000568394 MRPL44Q9H9J2 332 aaKnown RBP22.64■■□□□ 1.21
AC009041.2-204ENST00000568394 HMGB1P09429 215 aaKnown RBP22.63■■□□□ 1.21
AC009041.2-204ENST00000568394 FAM204AQ9H8W3 233 aa22.63■■□□□ 1.21
AC009041.2-204ENST00000568394 ASAP1Q9ULH1 1129 aa22.63■■□□□ 1.21
AC009041.2-204ENST00000568394 ZNF335Q9H4Z2 1342 aaPredicted RBP22.63■■□□□ 1.21
AC009041.2-204ENST00000568394 NRKQ7Z2Y5 1582 aa22.63■■□□□ 1.21
AC009041.2-204ENST00000568394 CCDC175P0C221 793 aa22.63■■□□□ 1.21
AC009041.2-204ENST00000568394 PDIA6Q15084 440 aa22.63■■□□□ 1.21
AC009041.2-204ENST00000568394 PNKPQ96T60 521 aa22.63■■□□□ 1.21
AC009041.2-204ENST00000568394 KIF28PB7ZC32 967 aa22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 NOP2P46087 812 aaKnown RBP22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 TNNI3KQ59H18 835 aa22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 PHKBQ93100 1093 aa22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 CDC5LQ99459 802 aaKnown RBP22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 FPGT-TNNI3KV9GXZ4 949 aa22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 ATP8B1O43520 1251 aa22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 LIG3P49916 1009 aa22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 MNAT1P51948 309 aa22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 SLC4A8Q2Y0W8 1093 aa22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 CCDC102BQ68D86 513 aa22.62■■□□□ 1.21
AC009041.2-204ENST00000568394 CCDC151A5D8V7 595 aa22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 FDPSP14324 419 aaKnown RBP22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 NFXL1Q6ZNB6 911 aa22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 DHX37Q8IY37 1157 aaKnown RBP22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 HOOK1Q9UJC3 728 aaKnown RBP22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 COL15A1P39059 1388 aa22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 DHX8Q14562 1220 aaKnown RBP22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 TTC19Q6DKK2 380 aaPredicted RBP22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 MICU3Q86XE3 530 aa22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 CAPZA3Q96KX2 299 aa22.61■■□□□ 1.21
AC009041.2-204ENST00000568394 PDE4BQ07343 736 aa22.6■■□□□ 1.21
AC009041.2-204ENST00000568394 RIN2Q8WYP3 895 aaPredicted RBP22.6■■□□□ 1.21
AC009041.2-204ENST00000568394 SAMSN1Q9NSI8 373 aaKnown RBP22.6■■□□□ 1.21
AC009041.2-204ENST00000568394 MROH7-TTC4A0A0A0MT08 1334 aa22.6■■□□□ 1.21
AC009041.2-204ENST00000568394 MED23Q9ULK4 1368 aa22.6■■□□□ 1.21
AC009041.2-204ENST00000568394 PIP4K2BP78356 416 aa22.6■■□□□ 1.21
AC009041.2-204ENST00000568394 TRIM29Q14134 588 aa22.6■■□□□ 1.21
AC009041.2-204ENST00000568394 SPECC1LQ69YQ0 1117 aa22.6■■□□□ 1.21
AC009041.2-204ENST00000568394 ALG1Q9BT22 464 aa22.6■■□□□ 1.21
AC009041.2-204ENST00000568394 A0A1W2PQ27 194 aa22.59■■□□□ 1.21
AC009041.2-204ENST00000568394 A0A1W2PQ64 194 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms