RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 SKIV2LQ15477 1246 aaKnown RBP7.45□□□□□ -1.22
CHD9-217ENST00000565832 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.45□□□□□ -1.22
CHD9-217ENST00000565832 POLR3EQ9NVU0 708 aa7.45□□□□□ -1.22
CHD9-217ENST00000565832 CARMIL3Q8ND23 1372 aa7.45□□□□□ -1.22
CHD9-217ENST00000565832 RTL9Q8NET4 1388 aa7.45□□□□□ -1.22
CHD9-217ENST00000565832 PSDA5PKW4 1024 aaPredicted RBP7.44□□□□□ -1.22
CHD9-217ENST00000565832 POLRMTO00411 1230 aaKnown RBP7.44□□□□□ -1.22
CHD9-217ENST00000565832 CYP21A2P08686 494 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
CHD9-217ENST00000565832 AK2P54819 239 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 RUFY3Q7L099 469 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 PROCA1Q8NCQ7 364 aaPredicted RBP7.44□□□□□ -1.22
CHD9-217ENST00000565832 FAM84BQ96KN1 310 aaPredicted RBP7.44□□□□□ -1.22
CHD9-217ENST00000565832 TTC14Q96N46 770 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 RCCD1A6NED2 376 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 PPP1R3GB7ZBB8 358 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 LARGE1O95461 756 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 PTPREP23469 700 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 OLFM4Q6UX06 510 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 DEFB132Q7Z7B7 95 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 KCNB2Q92953 911 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 IL17RAQ96F46 866 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 CHAMP1Q96JM3 812 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 LRRC2Q9BYS8 371 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 HELLSQ9NRZ9 838 aa7.44□□□□□ -1.22
CHD9-217ENST00000565832 TNRC6CQ9HCJ0 1690 aaKnown RBP7.44□□□□□ -1.22
CHD9-217ENST00000565832 ZNF532Q9HCE3 1301 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 HOXB1P14653 301 aaPredicted RBP7.43□□□□□ -1.22
CHD9-217ENST00000565832 ZKSCAN1P17029 563 aaPredicted RBP7.43□□□□□ -1.22
CHD9-217ENST00000565832 HAND2P61296 217 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 FOXD4L5Q5VV16 416 aaPredicted RBP7.43□□□□□ -1.22
CHD9-217ENST00000565832 MYSM1Q5VVJ2 828 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 STOX1Q6ZVD7 989 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 CHST3Q7LGC8 479 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 MAGEB6Q8N7X4 407 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 NKX2-3Q8TAU0 364 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 FBXO41Q8TF61 875 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 FOXD4L4Q8WXT5 416 aaPredicted RBP7.43□□□□□ -1.22
CHD9-217ENST00000565832 ZNF512BQ96KM6 892 aaPredicted RBP7.43□□□□□ -1.22
CHD9-217ENST00000565832 ANKIB1Q9P2G1 1089 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 ABCF2Q9UG63 623 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 TCRBV5S4A2TA0A5A2 114 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 EPB41L2O43491 1005 aaKnown RBP7.43□□□□□ -1.22
CHD9-217ENST00000565832 FGAP02671 866 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 UQCRFS1P1P0C7P4 283 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 PDE6AP16499 860 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 ADD2P35612 726 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 NUDT18Q6ZVK8 323 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 ADGRA1Q86SQ6 560 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 VPS37DQ86XT2 251 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 INCENPQ9NQS7 918 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 PDRG1Q9NUG6 133 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 CHMP5Q9NZZ3 219 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 DENND2AQ9ULE3 1009 aa7.43□□□□□ -1.22
CHD9-217ENST00000565832 LRP5O75197 1615 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 PNPLA7Q6ZV29 1317 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 COL24A1Q17RW2 1714 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 GPAA1O43292 621 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 MMP10P09238 476 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 UBE4AQ14139 1066 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 NECAB1Q8N987 351 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 MIGA1Q8NAN2 632 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 RPGRQ92834 1020 aaKnown RBP7.42□□□□□ -1.22
CHD9-217ENST00000565832 CAMKK2Q96RR4 588 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 LRP2BPQ9P2M1 347 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 NSFL1CQ9UNZ2 370 aaKnown RBP7.42□□□□□ -1.22
CHD9-217ENST00000565832 CYP46A1Q9Y6A2 500 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 ZNF804BA4D1E1 1349 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 SNPHO15079 494 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 PRKAB2O43741 272 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 APPP05067 770 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 GPSM2P81274 684 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 GRAPQ13588 217 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 CRY2Q49AN0 593 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 CAVIN4Q5BKX8 364 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 GRAPLQ8TC17 118 aaPredicted RBP7.42□□□□□ -1.22
CHD9-217ENST00000565832 ZNF384Q8TF68 577 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 APPBP2Q92624 585 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 TNPO1Q92973 898 aaKnown RBP7.42□□□□□ -1.22
CHD9-217ENST00000565832 TPCN1Q9ULQ1 816 aa7.42□□□□□ -1.22
CHD9-217ENST00000565832 SMIM22K7EJ46 135 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 ST5P78524 1137 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 CHAF1AQ13111 956 aaPredicted RBP7.41□□□□□ -1.22
CHD9-217ENST00000565832 TTF1Q15361 905 aaPredicted RBP7.41□□□□□ -1.22
CHD9-217ENST00000565832 ME3Q16798 604 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 RNF20Q5VTR2 975 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 FBXO33Q7Z6M2 555 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 STK11IPQ8N1F8 1099 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 NLGN1Q8N2Q7 840 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 DSCC1Q9BVC3 393 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.41□□□□□ -1.225e-6■■□□□ 11.5
CHD9-217ENST00000565832 ARMT1Q9H993 441 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 ZDHHC9Q9Y397 364 aa7.41□□□□□ -1.22
CHD9-217ENST00000565832 COL1A1P02452 1464 aaPredicted RBP7.41□□□□□ -1.22
CHD9-217ENST00000565832 MYH7P12883 1935 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 E7EWF7 191 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 PPFIA3O75145 1194 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 ZFYP08048 801 aaPredicted RBP7.4□□□□□ -1.22
CHD9-217ENST00000565832 RPS6KB1P23443 525 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 HIBADHP31937 336 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms