RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 H7C1W4 665 aa23.09■■□□□ 1.29
E4F1-203ENST00000563643 CRKP46108 304 aa23.09■■□□□ 1.29
E4F1-203ENST00000563643 NEXNQ0ZGT2 675 aa23.09■■□□□ 1.29
E4F1-203ENST00000563643 KSR2Q6VAB6 950 aa23.09■■□□□ 1.29
E4F1-203ENST00000563643 PLA2G12BQ9BX93 195 aa23.09■■□□□ 1.29
E4F1-203ENST00000563643 UBE2OQ9C0C9 1292 aaKnown RBP23.09■■□□□ 1.29
E4F1-203ENST00000563643 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
E4F1-203ENST00000563643 PRUNE2Q8WUY3 3088 aa23.09■■□□□ 1.29
E4F1-203ENST00000563643 CSF1RP07333 972 aa23.08■■□□□ 1.29
E4F1-203ENST00000563643 CACNB3P54284 484 aa23.08■■□□□ 1.29
E4F1-203ENST00000563643 MOGSQ13724 837 aa23.08■■□□□ 1.29
E4F1-203ENST00000563643 KCNH4Q9UQ05 1017 aa23.08■■□□□ 1.29
E4F1-203ENST00000563643 CYP2C8P10632 490 aa23.07■■□□□ 1.28
E4F1-203ENST00000563643 HOOK2Q96ED9 719 aa23.07■■□□□ 1.28
E4F1-203ENST00000563643 IRF5Q13568 498 aa23.06■■□□□ 1.28
E4F1-203ENST00000563643 A0A1B0GUL6 1792 aa23.05■■□□□ 1.28
E4F1-203ENST00000563643 ANKRD18BA2A2Z9 1011 aa23.05■■□□□ 1.28
E4F1-203ENST00000563643 INPP5BP32019 993 aa23.05■■□□□ 1.28
E4F1-203ENST00000563643 DCAF15Q66K64 600 aa23.05■■□□□ 1.28
E4F1-203ENST00000563643 ANKLE1Q8NAG6 615 aa23.05■■□□□ 1.28
E4F1-203ENST00000563643 POTEB2H3BUK9 544 aa23.04■■□□□ 1.28
E4F1-203ENST00000563643 FAM109BQ6ICB4 259 aaPredicted RBP23.04■■□□□ 1.28
E4F1-203ENST00000563643 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.04■■□□□ 1.28
E4F1-203ENST00000563643 MGAMO43451 1857 aa23.04■■□□□ 1.28
E4F1-203ENST00000563643 TNPO2O14787 897 aaKnown RBP23.03■■□□□ 1.28
E4F1-203ENST00000563643 ZNF853P0CG23 659 aa23.03■■□□□ 1.28
E4F1-203ENST00000563643 CCDC30Q5VVM6 783 aa23.03■■□□□ 1.28
E4F1-203ENST00000563643 TDRD7Q8NHU6 1098 aaKnown RBP23.03■■□□□ 1.28
E4F1-203ENST00000563643 ZNF341Q9BYN7 854 aa23.03■■□□□ 1.28
E4F1-203ENST00000563643 NBPF3Q9H094 633 aa23.03■■□□□ 1.28
E4F1-203ENST00000563643 CASP7P55210 303 aa23.02■■□□□ 1.28
E4F1-203ENST00000563643 FAM83AQ86UY5 434 aa23.02■■□□□ 1.28
E4F1-203ENST00000563643 FAM161BQ96MY7 647 aa23.02■■□□□ 1.28
E4F1-203ENST00000563643 TAOK2Q9UL54 1235 aa23.02■■□□□ 1.28
E4F1-203ENST00000563643 COL9A1P20849 921 aa23.01■■□□□ 1.27
E4F1-203ENST00000563643 GCKRQ14397 625 aa23.01■■□□□ 1.27
E4F1-203ENST00000563643 GRIK5Q16478 980 aa23.01■■□□□ 1.27
E4F1-203ENST00000563643 GPAT2Q6NUI2 795 aa23.01■■□□□ 1.27
E4F1-203ENST00000563643 MIGA2Q7L4E1 593 aa23.01■■□□□ 1.27
E4F1-203ENST00000563643 TMOD2Q9NZR1 351 aa23.01■■□□□ 1.27
E4F1-203ENST00000563643 CDH23Q9H251 3354 aa23.01■■□□□ 1.27
E4F1-203ENST00000563643 RPAP1Q9BWH6 1393 aaPredicted RBP23.01■■□□□ 1.27
E4F1-203ENST00000563643 APAF1O14727 1248 aa23■■□□□ 1.27
E4F1-203ENST00000563643 C8orf58Q8NAV2 365 aa23■■□□□ 1.27
E4F1-203ENST00000563643 C11orf49Q9H6J7 331 aa23■■□□□ 1.27
E4F1-203ENST00000563643 IFIT5Q13325 482 aaKnown RBP22.99■■□□□ 1.27
E4F1-203ENST00000563643 FKBP1CQ5VVH2 108 aa22.99■■□□□ 1.27
E4F1-203ENST00000563643 PLIN1O60240 522 aa22.98■■□□□ 1.27
E4F1-203ENST00000563643 GYG1P46976 350 aa22.98■■□□□ 1.27
E4F1-203ENST00000563643 HDLBPQ00341 1268 aaKnown RBP22.98■■□□□ 1.27
E4F1-203ENST00000563643 TEKT1Q969V4 418 aa22.98■■□□□ 1.27
E4F1-203ENST00000563643 CHMP4AQ9BY43 222 aa22.98■■□□□ 1.27
E4F1-203ENST00000563643 IFT57Q9NWB7 429 aa22.98■■□□□ 1.27
E4F1-203ENST00000563643 COL2A1P02458 1487 aaPredicted RBP22.98■■□□□ 1.27
E4F1-203ENST00000563643 HIBADHP31937 336 aaKnown RBP22.97■■□□□ 1.27
E4F1-203ENST00000563643 ZNF112Q9UJU3 913 aa22.96■■□□□ 1.27
E4F1-203ENST00000563643 DDX60LQ5H9U9 1706 aaKnown RBP22.96■■□□□ 1.27
E4F1-203ENST00000563643 CXCL11O14625 94 aa22.95■■□□□ 1.26
E4F1-203ENST00000563643 NOL9Q5SY16 702 aaKnown RBP22.95■■□□□ 1.26
E4F1-203ENST00000563643 MAFAQ8NHW3 353 aaPredicted RBP22.95■■□□□ 1.26
E4F1-203ENST00000563643 FAM84BQ96KN1 310 aaPredicted RBP22.95■■□□□ 1.26
E4F1-203ENST00000563643 ZDHHC15Q96MV8 337 aa22.95■■□□□ 1.26
E4F1-203ENST00000563643 CHMP3Q9Y3E7 222 aa22.95■■□□□ 1.26
E4F1-203ENST00000563643 HMGCRP04035 888 aa22.94■■□□□ 1.26
E4F1-203ENST00000563643 GNAI1P63096 354 aa22.94■■□□□ 1.26
E4F1-203ENST00000563643 ZNF697Q5TEC3 545 aa22.94■■□□□ 1.26
E4F1-203ENST00000563643 APOBEC3HQ6NTF7 200 aaKnown RBP22.94■■□□□ 1.26
E4F1-203ENST00000563643 COA7Q96BR5 231 aa22.94■■□□□ 1.26
E4F1-203ENST00000563643 MYH16Q9H6N6 1097 aa22.94■■□□□ 1.26
E4F1-203ENST00000563643 PFASO15067 1338 aa22.93■■□□□ 1.26
E4F1-203ENST00000563643 MDM2Q00987 491 aaPredicted RBP22.93■■□□□ 1.26
E4F1-203ENST00000563643 LDHAL6AQ6ZMR3 332 aa22.93■■□□□ 1.26
E4F1-203ENST00000563643 SMCR8Q8TEV9 937 aaPredicted RBP22.93■■□□□ 1.26
E4F1-203ENST00000563643 SYMPKQ92797 1274 aaKnown RBP22.93■■□□□ 1.26
E4F1-203ENST00000563643 A0A0G2JLL6 359 aaPredicted RBP22.92■■□□□ 1.26
E4F1-203ENST00000563643 FOXO4P98177 505 aa22.92■■□□□ 1.26
E4F1-203ENST00000563643 FASTKD5Q7L8L6 764 aaKnown RBP22.92■■□□□ 1.26
E4F1-203ENST00000563643 PRRT2Q7Z6L0 340 aaPredicted RBP22.92■■□□□ 1.26
E4F1-203ENST00000563643 ZNF594Q96JF6 807 aaPredicted RBP22.92■■□□□ 1.26
E4F1-203ENST00000563643 CDX2Q99626 313 aaPredicted RBP22.92■■□□□ 1.26
E4F1-203ENST00000563643 HMX1Q9NP08 348 aaPredicted RBP22.92■■□□□ 1.26
E4F1-203ENST00000563643 CNNM1Q9NRU3 951 aa22.92■■□□□ 1.26
E4F1-203ENST00000563643 CHAF1AQ13111 956 aaPredicted RBP22.91■■□□□ 1.26
E4F1-203ENST00000563643 UBE4AQ14139 1066 aa22.91■■□□□ 1.26
E4F1-203ENST00000563643 G2E3Q7L622 706 aa22.91■■□□□ 1.26
E4F1-203ENST00000563643 TSPYL6Q8N831 410 aa22.91■■□□□ 1.26
E4F1-203ENST00000563643 STK31Q9BXU1 1019 aa22.91■■□□□ 1.26
E4F1-203ENST00000563643 OGDHLQ9ULD0 1010 aa22.91■■□□□ 1.26
E4F1-203ENST00000563643 IQSEC3Q9UPP2 1182 aaPredicted RBP22.91■■□□□ 1.26
E4F1-203ENST00000563643 SLC45A1Q9Y2W3 748 aa22.91■■□□□ 1.26
E4F1-203ENST00000563643 TAF7LQ5H9L4 462 aa22.9■■□□□ 1.26
E4F1-203ENST00000563643 TBC1D22AQ8WUA7 517 aa22.9■■□□□ 1.26
E4F1-203ENST00000563643 FAM151AQ8WW52 585 aa22.9■■□□□ 1.26
E4F1-203ENST00000563643 RAPGEFL1Q9UHV5 662 aa22.9■■□□□ 1.26
E4F1-203ENST00000563643 CALD1Q05682 793 aaKnown RBP22.89■■□□□ 1.25
E4F1-203ENST00000563643 TRIM32Q13049 653 aa22.89■■□□□ 1.25
E4F1-203ENST00000563643 NCBP3Q53F19 620 aaKnown RBP22.89■■□□□ 1.25
E4F1-203ENST00000563643 GADL1Q6ZQY3 521 aa22.89■■□□□ 1.25
E4F1-203ENST00000563643 ANKRD13CQ8N6S4 541 aa22.89■■□□□ 1.25
E4F1-203ENST00000563643 LINS1Q8NG48 757 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms